RNA–Protein interactions for RNA: snR5

snR5, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR5, Length 204 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR5	snR5	YLR412C-A	Q3E742	68 aa		0.75	□□□□□ -2.29
snR5	snR5	STF2	P16965	84 aa		0.74	□□□□□ -2.29
snR5	snR5	GPI14	P47088	403 aa	Known RBP	0.74	□□□□□ -2.29
snR5	snR5	YLR422W	Q06409	1932 aa		0.74	□□□□□ -2.29
snR5	snR5	PRP8	P33334	2413 aa	Known RBP	0.73	□□□□□ -2.29
snR5	snR5	CBF1	P17106	351 aa		0.73	□□□□□ -2.29
snR5	snR5	MAK31	P23059	88 aa		0.73	□□□□□ -2.29
snR5	snR5	NSA2	P40078	261 aa	Known RBP	0.73	□□□□□ -2.29
snR5	snR5	NSE4	P43124	402 aa		0.73	□□□□□ -2.29
snR5	snR5	YGL235W	P53071	178 aa		0.73	□□□□□ -2.29
snR5	snR5	PGA1	P53896	198 aa		0.73	□□□□□ -2.29
snR5	snR5	NRK1	P53915	240 aa		0.73	□□□□□ -2.29
snR5	snR5	YHP1	Q04116	353 aa		0.73	□□□□□ -2.29
snR5	snR5	FYV12	Q08559	129 aa		0.73	□□□□□ -2.29
snR5	snR5	ATP20	Q12233	115 aa		0.73	□□□□□ -2.29
snR5	snR5	IGO2	Q9P305	131 aa		0.73	□□□□□ -2.29
snR5	snR5	MATALPHA2	P0CY08	210 aa		0.72	□□□□□ -2.29
snR5	snR5	HMLALPHA2	P0CY09	210 aa		0.72	□□□□□ -2.29
snR5	snR5	NTG1	P31378	399 aa		0.72	□□□□□ -2.29
snR5	snR5	NSG1	P38837	291 aa		0.72	□□□□□ -2.29
snR5	snR5	DCV1	P43595	202 aa		0.72	□□□□□ -2.29
snR5	snR5	RTC4	P53850	401 aa		0.72	□□□□□ -2.29
snR5	snR5	FIT1	Q04433	528 aa		0.72	□□□□□ -2.29
snR5	snR5	ADE1	P27616	306 aa		0.71	□□□□□ -2.3
snR5	snR5	YIL102C	P40488	101 aa		0.71	□□□□□ -2.3
snR5	snR5	YFL051C	P43552	160 aa		0.71	□□□□□ -2.3
snR5	snR5	DML1	Q03652	475 aa		0.71	□□□□□ -2.3
snR5	snR5	UPS1	Q05776	175 aa		0.71	□□□□□ -2.3
snR5	snR5	DGK1	Q12382	290 aa		0.71	□□□□□ -2.3
snR5	snR5	YMR030W-A	Q3E760	96 aa		0.71	□□□□□ -2.3
snR5	snR5	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.71	□□□□□ -2.3
snR5	snR5	FMP49	A0A023PZB3	126 aa		0.7	□□□□□ -2.3
snR5	snR5	YKT6	P36015	200 aa	Known RBP	0.7	□□□□□ -2.3
snR5	snR5	RRT1	P38192	103 aa		0.7	□□□□□ -2.3
snR5	snR5	PIR1	Q03178	341 aa		0.7	□□□□□ -2.3
snR5	snR5	YOL024W	Q08172	172 aa		0.7	□□□□□ -2.3
snR5	snR5	DUR1,2	P32528	1835 aa	Known RBP	0.7	□□□□□ -2.3
snR5	snR5	ELP6	Q04868	273 aa		0.69	□□□□□ -2.3
snR5	snR5	YAR064W	P39563	99 aa		0.68	□□□□□ -2.3
snR5	snR5	CCS1	P40202	249 aa	Known RBP	0.68	□□□□□ -2.3
snR5	snR5	SBH2	P52871	88 aa		0.68	□□□□□ -2.3
snR5	snR5	MPD1	Q12404	318 aa	Known RBP	0.68	□□□□□ -2.3
snR5	snR5	YOR381W-A	Q3E804	55 aa		0.68	□□□□□ -2.3
snR5	snR5	YPR014C	Q6B0W2	109 aa		0.68	□□□□□ -2.3
snR5	snR5	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.67	□□□□□ -2.3	not detected
snR5	snR5	ATG41	Q12048	136 aa		0.67	□□□□□ -2.3
snR5	snR5	YKR070W	P36151	352 aa	Known RBP	0.66	□□□□□ -2.3
snR5	snR5	FMP32	P43557	207 aa		0.66	□□□□□ -2.3
snR5	snR5	YJR015W	P47090	510 aa		0.66	□□□□□ -2.3
snR5	snR5	YGL230C	P53074	147 aa		0.66	□□□□□ -2.3
snR5	snR5	GRX5	Q02784	150 aa		0.66	□□□□□ -2.3
snR5	snR5	GAL83	Q04739	417 aa		0.66	□□□□□ -2.3
snR5	snR5	TAH1	P25638	111 aa	Predicted RBP	0.65	□□□□□ -2.31
snR5	snR5	SHB17	P36136	271 aa	Known RBP	0.65	□□□□□ -2.31
snR5	snR5	YNL200C	P40165	246 aa	Known RBP	0.65	□□□□□ -2.31
snR5	snR5	AIM34	Q03673	198 aa		0.65	□□□□□ -2.31
snR5	snR5	AHC2	P25649	128 aa		0.64	□□□□□ -2.31
snR5	snR5	FYV4	P38783	130 aa	Predicted RBP	0.64	□□□□□ -2.31
snR5	snR5	SBH1	P52870	82 aa		0.64	□□□□□ -2.31
snR5	snR5	NOC4	Q06512	552 aa	Predicted RBP	0.64	□□□□□ -2.31
snR5	snR5	HFA1	P32874	2273 aa		0.63	□□□□□ -2.31
snR5	snR5	HSP30	P25619	332 aa		0.63	□□□□□ -2.31
snR5	snR5	CGR1	P53188	120 aa		0.63	□□□□□ -2.31
snR5	snR5	YDC1	Q02896	317 aa		0.63	□□□□□ -2.31
snR5	snR5	TMA23	Q03525	211 aa		0.63	□□□□□ -2.31
snR5	snR5	RIM9	Q04734	239 aa		0.63	□□□□□ -2.31
snR5	snR5	KEI1	Q06346	221 aa		0.63	□□□□□ -2.31
snR5	snR5	SEC14	P24280	304 aa	Known RBP	0.62	□□□□□ -2.31
snR5	snR5	CAF4	P36130	643 aa		0.62	□□□□□ -2.31
snR5	snR5	PAC10	P48363	199 aa		0.61	□□□□□ -2.31
snR5	snR5	HHT1	P61830	136 aa		0.61	□□□□□ -2.31
snR5	snR5	CWC21	Q03375	135 aa	Known RBP	0.61	□□□□□ -2.31
snR5	snR5	GPI17	Q04080	534 aa		0.61	□□□□□ -2.31
snR5	snR5	SHH4	Q06236	168 aa		0.61	□□□□□ -2.31
snR5	snR5	YPR127W	Q06494	345 aa		0.61	□□□□□ -2.31
snR5	snR5	TRX3	P25372	127 aa		0.6	□□□□□ -2.31
snR5	snR5	YKL102C	P34249	101 aa		0.6	□□□□□ -2.31
snR5	snR5	SHG1	P38337	142 aa		0.6	□□□□□ -2.31
snR5	snR5	RFC2	P40348	353 aa		0.6	□□□□□ -2.31
snR5	snR5	YKR005C	Q02203	525 aa		0.6	□□□□□ -2.31
snR5	snR5	YOL013W-A	P0C272	63 aa	Predicted RBP	0.59	□□□□□ -2.31
snR5	snR5	VPS28	Q02767	242 aa		0.59	□□□□□ -2.31
snR5	snR5	HPT1	Q04178	221 aa	Known RBP	0.59	□□□□□ -2.31
snR5	snR5	GRX8	Q05926	109 aa		0.59	□□□□□ -2.31
snR5	snR5	YOR214C	Q12282	236 aa		0.59	□□□□□ -2.31
snR5	snR5	RIF1	P29539	1916 aa		0.58	□□□□□ -2.32
snR5	snR5	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.58	□□□□□ -2.32	not detected
snR5	snR5	CPR5	P35176	225 aa		0.58	□□□□□ -2.32
snR5	snR5	YKR041W	P36134	250 aa		0.58	□□□□□ -2.32
snR5	snR5	TTI2	P47168	421 aa		0.58	□□□□□ -2.32
snR5	snR5	RAD9	P14737	1309 aa		0.58	□□□□□ -2.32
snR5	snR5	PRE1	P22141	198 aa	Known RBP	0.57	□□□□□ -2.32
snR5	snR5	YCR001W	P25347	104 aa		0.57	□□□□□ -2.32
snR5	snR5	CLG1	P35190	452 aa		0.57	□□□□□ -2.32
snR5	snR5	NVJ1	P38881	321 aa		0.57	□□□□□ -2.32
snR5	snR5	YEL073C	P39974	107 aa		0.57	□□□□□ -2.32
snR5	snR5	NQM1	P53228	333 aa	Predicted RBP	0.57	□□□□□ -2.32
snR5	snR5	AVO2	Q04749	426 aa		0.57	□□□□□ -2.32
snR5	snR5	KIN28	P06242	306 aa		0.56	□□□□□ -2.32
snR5	snR5	HHY1	P39982	102 aa		0.56	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms