RNA–Protein interactions for RNA: snR41

snR41, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR41, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR41snR41 STE18P18852 110 aa-0.17□□□□□ -2.44
snR41snR41 CBT1P36038 271 aaPredicted RBP-0.17□□□□□ -2.44
snR41snR41 GPI14P47088 403 aaKnown RBP-0.17□□□□□ -2.44
snR41snR41 YLR031WQ07978 186 aa-0.17□□□□□ -2.44
snR41snR41 PRP18P33411 251 aaPredicted RBP-0.18□□□□□ -2.44
snR41snR41 IKI1P38874 309 aa-0.18□□□□□ -2.44
snR41snR41 CCS1P40202 249 aaKnown RBP-0.18□□□□□ -2.44
snR41snR41 YFL019CP43576 117 aa-0.18□□□□□ -2.44
snR41snR41 PIR1Q03178 341 aa-0.18□□□□□ -2.44
snR41snR41 CDC33P07260 213 aaKnown RBP-0.19□□□□□ -2.44
snR41snR41 RTR1P40084 226 aaPredicted RBP-0.19□□□□□ -2.44
snR41snR41 DML1Q03652 475 aa-0.19□□□□□ -2.44
snR41snR41 YOR342CQ12182 319 aa-0.19□□□□□ -2.44
snR41snR41 ATP20Q12233 115 aa-0.19□□□□□ -2.44
snR41snR41 PTC1P35182 281 aa-0.2□□□□□ -2.44
snR41snR41 RFC4P40339 323 aaKnown RBP-0.2□□□□□ -2.44
snR41snR41 YLR422WQ06409 1932 aa-0.21□□□□□ -2.44
snR41snR41 MRS1P07266 363 aa-0.21□□□□□ -2.44
snR41snR41 RPS24AP0CX31 135 aaKnown RBP-0.21□□□□□ -2.44
snR41snR41 RPS24BP0CX32 135 aaKnown RBP-0.21□□□□□ -2.44
snR41snR41 COQ1P18900 473 aa-0.21□□□□□ -2.44
snR41snR41 NTG1P31378 399 aa-0.21□□□□□ -2.44
snR41snR41 NSA2P40078 261 aaKnown RBP-0.21□□□□□ -2.44
snR41snR41 ATG41Q12048 136 aa-0.21□□□□□ -2.44
snR41snR41 RRT1P38192 103 aa-0.22□□□□□ -2.44
snR41snR41 YKR005CQ02203 525 aa-0.22□□□□□ -2.44
snR41snR41 PRE1P22141 198 aaKnown RBP-0.23□□□□□ -2.45
snR41snR41 RFA3P26755 122 aaKnown RBP-0.23□□□□□ -2.45
snR41snR41 TMA22P47089 198 aaPredicted RBP-0.23□□□□□ -2.45
snR41snR41 NRK1P53915 240 aa-0.23□□□□□ -2.45
snR41snR41 YLR412C-AQ3E742 68 aa-0.23□□□□□ -2.45
snR41snR41 YLR307C-AQ3E825 87 aa-0.23□□□□□ -2.45
snR41snR41 YRA2P36036 203 aaKnown RBP RIP-Chip data-0.24□□□□□ -2.45not detected
snR41snR41 POG1P40473 351 aa-0.24□□□□□ -2.45
snR41snR41 FCY1Q12178 158 aa-0.24□□□□□ -2.45
snR41snR41 YOR381W-AQ3E804 55 aa-0.24□□□□□ -2.45
snR41snR41 RPL43AP0CX25 92 aaKnown RBP-0.25□□□□□ -2.45
snR41snR41 RPL43BP0CX26 92 aa-0.25□□□□□ -2.45
snR41snR41 YNL184CP53876 108 aa-0.25□□□□□ -2.45
snR41snR41 HHT1P61830 136 aa-0.25□□□□□ -2.45
snR41snR41 GRX5Q02784 150 aa-0.25□□□□□ -2.45
snR41snR41 NSG1P38837 291 aa-0.26□□□□□ -2.45
snR41snR41 AVO2Q04749 426 aa-0.26□□□□□ -2.45
snR41snR41 RUD3Q12234 484 aaKnown RBP-0.26□□□□□ -2.45
snR41snR41 ROM2P51862 1356 aaKnown RBP-0.27□□□□□ -2.45
snR41snR41 KIN28P06242 306 aa-0.27□□□□□ -2.45
snR41snR41 MSS2P40990 351 aa-0.27□□□□□ -2.45
snR41snR41 YMR141CP40211 102 aa-0.28□□□□□ -2.45
snR41snR41 CIN5P40917 295 aa-0.28□□□□□ -2.45
snR41snR41 YLR157W-EP0CF00 54 aa-0.29□□□□□ -2.46
snR41snR41 CLG1P35190 452 aa-0.29□□□□□ -2.46
snR41snR41 SBH1P52870 82 aa-0.29□□□□□ -2.46
snR41snR41 RIM9Q04734 239 aa-0.29□□□□□ -2.46
snR41snR41 PGA1P53896 198 aa-0.3□□□□□ -2.46
snR41snR41 ARO80Q04052 950 aa-0.3□□□□□ -2.46
snR41snR41 GAL83Q04739 417 aa-0.3□□□□□ -2.46
snR41snR41 APS3P47064 194 aa-0.31□□□□□ -2.46
snR41snR41 CCC1P47818 322 aa-0.31□□□□□ -2.46
snR41snR41 MMS2P53152 137 aa-0.31□□□□□ -2.46
snR41snR41 MGR2Q02889 113 aa-0.31□□□□□ -2.46
snR41snR41 GPI17Q04080 534 aa-0.31□□□□□ -2.46
snR41snR41 SEN15Q04675 128 aa-0.31□□□□□ -2.46
snR41snR41 RIF1P29539 1916 aa-0.31□□□□□ -2.46
snR41snR41 HTB1P02293 131 aaKnown RBP-0.32□□□□□ -2.46
snR41snR41 HTB2P02294 131 aa-0.32□□□□□ -2.46
snR41snR41 PAC10P48363 199 aa-0.32□□□□□ -2.46
snR41snR41 YCL012CQ8J0M4 134 aa-0.32□□□□□ -2.46
snR41snR41 RPS22AP0C0W1 130 aaKnown RBP-0.33□□□□□ -2.46
snR41snR41 HSP30P25619 332 aa-0.33□□□□□ -2.46
snR41snR41 YNL122CP53921 115 aaPredicted RBP-0.33□□□□□ -2.46
snR41snR41 YOR072WQ08486 104 aa-0.33□□□□□ -2.46
snR41snR41 RPS22BQ3E7Y3 130 aaKnown RBP-0.33□□□□□ -2.46
snR41snR41 IGO2Q9P305 131 aa-0.33□□□□□ -2.46
snR41snR41 GCY1P14065 312 aaKnown RBP RIP-Chip data-0.34□□□□□ -2.46not detected
snR41snR41 ADE1P27616 306 aa-0.34□□□□□ -2.46
snR41snR41 YPR014CQ6B0W2 109 aa-0.34□□□□□ -2.46
snR41snR41 YBR027CP38220 110 aa-0.35□□□□□ -2.47
snR41snR41 YNL200CP40165 246 aaKnown RBP-0.35□□□□□ -2.47
snR41snR41 GLC8P41818 229 aa-0.35□□□□□ -2.47
snR41snR41 RPS25BP0C0T4 108 aaKnown RBP-0.36□□□□□ -2.47
snR41snR41 SEC14P24280 304 aaKnown RBP-0.36□□□□□ -2.47
snR41snR41 FYV4P38783 130 aaPredicted RBP-0.36□□□□□ -2.47
snR41snR41 MOB1P40484 314 aa-0.36□□□□□ -2.47
snR41snR41 PGA2P53903 129 aa-0.36□□□□□ -2.47
snR41snR41 HRD1Q08109 551 aa-0.36□□□□□ -2.47
snR41snR41 YDL157CQ12082 118 aa-0.36□□□□□ -2.47
snR41snR41 MPD1Q12404 318 aaKnown RBP-0.36□□□□□ -2.47
snR41snR41 RPS25AQ3E792 108 aaPredicted RBP-0.36□□□□□ -2.47
snR41snR41 HAP2P06774 265 aa-0.37□□□□□ -2.47
snR41snR41 ARG80P07249 177 aa-0.37□□□□□ -2.47
snR41snR41 YML079WQ03629 201 aa-0.37□□□□□ -2.47
snR41snR41 YPR127WQ06494 345 aa-0.37□□□□□ -2.47
snR41snR41 YDL085C-AQ3E7B7 68 aaKnown RBP-0.37□□□□□ -2.47
snR41snR41 YHR140WP38842 239 aa-0.38□□□□□ -2.47
snR41snR41 YGR269WP40326 108 aa-0.38□□□□□ -2.47
snR41snR41 YOL024WQ08172 172 aa-0.38□□□□□ -2.47
snR41snR41 VAM10Q08474 114 aa-0.38□□□□□ -2.47
snR41snR41 RTC4P53850 401 aa-0.39□□□□□ -2.47
snR41snR41 VPS28Q02767 242 aa-0.39□□□□□ -2.47
snR41snR41 MRPS17Q03246 237 aaPredicted RBP-0.39□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms