RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W TTI2P47168 421 aa3.15□□□□□ -1.9
SWI1YPL016W LOA1Q06508 300 aa3.15□□□□□ -1.9
SWI1YPL016W IZH2Q12442 317 aa3.15□□□□□ -1.9
SWI1YPL016W MSI1P13712 422 aa3.15□□□□□ -1.91
SWI1YPL016W PUB1P32588 453 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91 RIP-Chip
SWI1YPL016W DER1P38307 211 aa3.15□□□□□ -1.91
SWI1YPL016W GZF3P42944 551 aaKnown RBP3.15□□□□□ -1.91
SWI1YPL016W BRP1P53194 125 aa3.15□□□□□ -1.91
SWI1YPL016W AHT1P29589 182 aa3.15□□□□□ -1.91
SWI1YPL016W DSS4P32601 143 aa3.15□□□□□ -1.91
SWI1YPL016W PAU2P32612 120 aa3.15□□□□□ -1.91
SWI1YPL016W SFH5P47008 294 aa3.15□□□□□ -1.91
SWI1YPL016W YNR048WP53740 393 aa3.15□□□□□ -1.91
SWI1YPL016W GRX8Q05926 109 aa3.15□□□□□ -1.91
SWI1YPL016W PAI3P01094 68 aa3.14□□□□□ -1.91
SWI1YPL016W INO4P13902 151 aa3.14□□□□□ -1.91
SWI1YPL016W UBC5P15732 148 aa3.14□□□□□ -1.91
SWI1YPL016W CBP4P37267 147 aa3.14□□□□□ -1.91
SWI1YPL016W YIL012WP40551 113 aa3.14□□□□□ -1.91
SWI1YPL016W LCB3P47013 409 aa3.14□□□□□ -1.91
SWI1YPL016W YGL262WP53054 175 aa3.14□□□□□ -1.91
SWI1YPL016W WSC3Q12215 556 aa3.14□□□□□ -1.91
SWI1YPL016W YDR157WA0A023PZE8 133 aa3.14□□□□□ -1.91
SWI1YPL016W SEC4P07560 215 aaKnown RBP3.14□□□□□ -1.91
SWI1YPL016W MOT3P54785 490 aaKnown RBP3.14□□□□□ -1.91
SWI1YPL016W LPP1Q04396 274 aa3.14□□□□□ -1.91
SWI1YPL016W RSF1Q05043 376 aa3.14□□□□□ -1.91
SWI1YPL016W YPQ1Q12010 308 aa3.14□□□□□ -1.91
SWI1YPL016W CYC3P06182 269 aa3.14□□□□□ -1.91
SWI1YPL016W CMC1P36064 111 aa3.14□□□□□ -1.91
SWI1YPL016W DOG2P38773 246 aa3.14□□□□□ -1.91
SWI1YPL016W SEC72P39742 193 aaKnown RBP3.14□□□□□ -1.91
SWI1YPL016W RTT102P53330 157 aa3.14□□□□□ -1.91
SWI1YPL016W GTO3Q04806 366 aa3.14□□□□□ -1.91
SWI1YPL016W YPR053CQ6Q5F3 151 aa3.14□□□□□ -1.91
SWI1YPL016W RPL12AP0CX53 165 aaKnown RBP3.13□□□□□ -1.91
SWI1YPL016W RPL12BP0CX54 165 aa3.13□□□□□ -1.91
SWI1YPL016W MNS1P32906 549 aa3.13□□□□□ -1.91
SWI1YPL016W SUR2P38992 349 aa3.13□□□□□ -1.91
SWI1YPL016W YJL193WP39542 402 aa3.13□□□□□ -1.91
SWI1YPL016W XBP1P40489 647 aa3.13□□□□□ -1.91
SWI1YPL016W SNO3P43544 222 aa3.13□□□□□ -1.91
SWI1YPL016W YGR039WP53225 103 aa3.13□□□□□ -1.91
SWI1YPL016W YNR040WP53736 256 aa3.13□□□□□ -1.91
SWI1YPL016W SNO2P53823 222 aa3.13□□□□□ -1.91
SWI1YPL016W CNL1Q06333 122 aa3.13□□□□□ -1.91
SWI1YPL016W FAS1P07149 2051 aaKnown RBP3.13□□□□□ -1.91
SWI1YPL016W CTA1P15202 515 aa3.13□□□□□ -1.91
SWI1YPL016W SPS18P32572 300 aa3.13□□□□□ -1.91
SWI1YPL016W YHR127WP38833 243 aaKnown RBP3.13□□□□□ -1.91
SWI1YPL016W YGL010WP25338 174 aa3.13□□□□□ -1.91
SWI1YPL016W GEX1P25596 615 aa3.13□□□□□ -1.91
SWI1YPL016W YKU70P32807 602 aa3.13□□□□□ -1.91
SWI1YPL016W OST2P46964 130 aa3.13□□□□□ -1.91
SWI1YPL016W CDH1P53197 566 aa3.13□□□□□ -1.91
SWI1YPL016W CRH1P53301 507 aa3.13□□□□□ -1.91
SWI1YPL016W CPD1P53314 239 aa3.13□□□□□ -1.91
SWI1YPL016W APM1Q00776 475 aaPredicted RBP3.13□□□□□ -1.91
SWI1YPL016W TRM13Q12383 476 aa3.13□□□□□ -1.91
SWI1YPL016W SWM2P40342 146 aa3.12□□□□□ -1.91
SWI1YPL016W UPS1Q05776 175 aa3.12□□□□□ -1.91
SWI1YPL016W YDL242WQ07746 117 aa3.12□□□□□ -1.91
SWI1YPL016W OPI10Q08202 246 aa3.12□□□□□ -1.91
SWI1YPL016W SEC16P48415 2195 aaKnown RBP3.12□□□□□ -1.91
SWI1YPL016W OXA1P39952 402 aa3.12□□□□□ -1.91
SWI1YPL016W AQR1P53943 586 aa3.12□□□□□ -1.91
SWI1YPL016W THI74Q04083 370 aa3.12□□□□□ -1.91
SWI1YPL016W YPL162CQ12042 273 aa3.12□□□□□ -1.91
SWI1YPL016W AYT1Q12226 474 aa3.12□□□□□ -1.91
SWI1YPL016W TAD3Q9URQ3 322 aa3.12□□□□□ -1.91
SWI1YPL016W Q0010Q9ZZX9 128 aa3.12□□□□□ -1.91
SWI1YPL016W MRPL20P22354 195 aaPredicted RBP3.12□□□□□ -1.91
SWI1YPL016W SSN3P39073 555 aa3.12□□□□□ -1.91
SWI1YPL016W YAR068WP39564 161 aa3.12□□□□□ -1.91
SWI1YPL016W YJL213WP40896 331 aa3.12□□□□□ -1.91
SWI1YPL016W LST8P41318 303 aa3.12□□□□□ -1.91
SWI1YPL016W HAC1P41546 238 aa3.12□□□□□ -1.91
SWI1YPL016W SPG3Q04398 127 aaPredicted RBP3.12□□□□□ -1.91
SWI1YPL016W YLR146W-AQ2V2P1 62 aa3.12□□□□□ -1.91
SWI1YPL016W YPT1P01123 206 aaKnown RBP3.12□□□□□ -1.91
SWI1YPL016W GPX1P36014 167 aa3.12□□□□□ -1.91
SWI1YPL016W ATF1P40353 525 aa3.12□□□□□ -1.91
SWI1YPL016W YRA1Q12159 226 aaKnown RBP3.12□□□□□ -1.91
SWI1YPL016W YOR029WQ12243 111 aa3.12□□□□□ -1.91
SWI1YPL016W ORT1Q12375 292 aa3.12□□□□□ -1.91
SWI1YPL016W YBR255C-AQ3E776 120 aa3.12□□□□□ -1.91
SWI1YPL016W RPS28BP0C0X0 67 aaKnown RBP3.11□□□□□ -1.91
SWI1YPL016W URK1P27515 501 aa3.11□□□□□ -1.91
SWI1YPL016W YKR041WP36134 250 aa3.11□□□□□ -1.91
SWI1YPL016W YIL163CP40448 117 aa3.11□□□□□ -1.91
SWI1YPL016W YFR057WP43625 151 aa3.11□□□□□ -1.91
SWI1YPL016W AIR2Q12476 344 aaKnown RBP3.11□□□□□ -1.91
SWI1YPL016W YAL063C-AQ3E791 96 aa3.11□□□□□ -1.91
SWI1YPL016W RPS28AQ3E7X9 67 aaPredicted RBP3.11□□□□□ -1.91
SWI1YPL016W RRT15Q3E811 62 aa3.11□□□□□ -1.91
SWI1YPL016W PRS4P38063 326 aaPredicted RBP3.11□□□□□ -1.91
SWI1YPL016W MRP21P38175 177 aa3.11□□□□□ -1.91
SWI1YPL016W GPP2P40106 250 aaKnown RBP3.11□□□□□ -1.91
SWI1YPL016W ERG26P53199 349 aaKnown RBP3.11□□□□□ -1.91
SWI1YPL016W MRPL19P53875 158 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms