RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W IDP1P21954 428 aaKnown RBP2.38□□□□□ -2.03
HSH49YOR319W TVP23P38962 199 aa2.38□□□□□ -2.03
HSH49YOR319W YNL200CP40165 246 aaKnown RBP2.38□□□□□ -2.03
HSH49YOR319W GLR1P41921 483 aaKnown RBP2.38□□□□□ -2.03
HSH49YOR319W YMR253CQ04835 414 aa2.38□□□□□ -2.03
HSH49YOR319W IRC23Q08416 157 aa2.38□□□□□ -2.03
HSH49YOR319W UBI4P0CG63 381 aaKnown RBP2.37□□□□□ -2.03
HSH49YOR319W MDH2P22133 377 aa2.37□□□□□ -2.03
HSH49YOR319W PAM17P36147 197 aa2.37□□□□□ -2.03
HSH49YOR319W NRG2P38082 220 aa2.37□□□□□ -2.03
HSH49YOR319W CSH1P38287 376 aa2.37□□□□□ -2.03
HSH49YOR319W FYV4P38783 130 aaPredicted RBP2.37□□□□□ -2.03
HSH49YOR319W MOG1P47123 218 aa2.37□□□□□ -2.03
HSH49YOR319W NQM1P53228 333 aaPredicted RBP2.37□□□□□ -2.03
HSH49YOR319W POP3P53833 195 aaPredicted RBP2.37□□□□□ -2.03
HSH49YOR319W DIG2Q03373 323 aaKnown RBP2.37□□□□□ -2.03
HSH49YOR319W RRP17Q04031 235 aaPredicted RBP2.37□□□□□ -2.03
HSH49YOR319W GAL83Q04739 417 aa2.37□□□□□ -2.03
HSH49YOR319W SML1Q04964 104 aa2.37□□□□□ -2.03
HSH49YOR319W ANT1Q06497 328 aa2.37□□□□□ -2.03
HSH49YOR319W BOL1Q3E793 110 aa2.37□□□□□ -2.03
HSH49YOR319W PBI2P0CT04 75 aaKnown RBP2.36□□□□□ -2.03
HSH49YOR319W SEC11P15367 167 aa2.36□□□□□ -2.03
HSH49YOR319W STP22P25604 385 aa2.36□□□□□ -2.03
HSH49YOR319W APQ12P40532 138 aa2.36□□□□□ -2.03
HSH49YOR319W KNH1P50112 268 aa2.36□□□□□ -2.03
HSH49YOR319W SBH1P52870 82 aa2.36□□□□□ -2.03
HSH49YOR319W YNL033WP53964 284 aa2.36□□□□□ -2.03
HSH49YOR319W YKR005CQ02203 525 aa2.36□□□□□ -2.03
HSH49YOR319W VPS28Q02767 242 aa2.36□□□□□ -2.03
HSH49YOR319W YDC1Q02896 317 aa2.36□□□□□ -2.03
HSH49YOR319W YPR202WQ08993 238 aa2.36□□□□□ -2.03
HSH49YOR319W RAD28Q12021 506 aa2.36□□□□□ -2.03
HSH49YOR319W ATP20Q12233 115 aa2.36□□□□□ -2.03
HSH49YOR319W PEX34P25584 144 aa2.35□□□□□ -2.03
HSH49YOR319W HSP30P25619 332 aa2.35□□□□□ -2.03
HSH49YOR319W PEP8P40335 379 aa2.35□□□□□ -2.03
HSH49YOR319W DLS1P40366 167 aa2.35□□□□□ -2.03
HSH49YOR319W BUD25P85052 153 aa2.35□□□□□ -2.03
HSH49YOR319W PET54P10834 293 aa2.34□□□□□ -2.03
HSH49YOR319W TMA19P35691 167 aaKnown RBP2.34□□□□□ -2.03
HSH49YOR319W VMA22P38784 181 aa2.34□□□□□ -2.03
HSH49YOR319W AYR1P40471 297 aa2.34□□□□□ -2.03
HSH49YOR319W ORM1P53224 222 aa2.34□□□□□ -2.03
HSH49YOR319W GRX5Q02784 150 aa2.34□□□□□ -2.03
HSH49YOR319W FYV12Q08559 129 aa2.34□□□□□ -2.03
HSH49YOR319W YHR086W-AQ3E746 53 aa2.34□□□□□ -2.03
HSH49YOR319W YOR1P53049 1477 aa2.33□□□□□ -2.04
HSH49YOR319W RPL2AP0CX45 254 aaKnown RBP2.33□□□□□ -2.04
HSH49YOR319W RPL2BP0CX46 254 aaKnown RBP2.33□□□□□ -2.04
HSH49YOR319W RPL30P14120 105 aaKnown RBP2.33□□□□□ -2.04
HSH49YOR319W UBC8P28263 218 aa2.33□□□□□ -2.04
HSH49YOR319W CPR5P35176 225 aa2.33□□□□□ -2.04
HSH49YOR319W RRT1P38192 103 aa2.33□□□□□ -2.04
HSH49YOR319W YBR220CP38318 560 aa2.33□□□□□ -2.04
HSH49YOR319W PKR1Q03880 122 aaKnown RBP2.33□□□□□ -2.04
HSH49YOR319W YPR174CQ06616 221 aaPredicted RBP2.33□□□□□ -2.04
HSH49YOR319W RAD6P06104 172 aa2.32□□□□□ -2.04
HSH49YOR319W ATP5P09457 212 aa2.32□□□□□ -2.04
HSH49YOR319W HHT1P61830 136 aa2.32□□□□□ -2.04
HSH49YOR319W DAD4P69851 72 aa2.32□□□□□ -2.04
HSH49YOR319W RAV2Q03956 351 aa2.32□□□□□ -2.04
HSH49YOR319W PRP11Q07350 266 aaPredicted RBP2.32□□□□□ -2.04
HSH49YOR319W TRM3Q07527 1436 aa2.32□□□□□ -2.04
HSH49YOR319W FAS1P07149 2051 aaKnown RBP2.31□□□□□ -2.04
HSH49YOR319W IPI1P38803 334 aaPredicted RBP2.31□□□□□ -2.04
HSH49YOR319W IGO1P53897 168 aa2.31□□□□□ -2.04
HSH49YOR319W RNH202Q05635 350 aa2.31□□□□□ -2.04
HSH49YOR319W SYM1Q06563 197 aa2.31□□□□□ -2.04
HSH49YOR319W YPD1Q07688 167 aa2.31□□□□□ -2.04
HSH49YOR319W YPR013CQ12145 317 aa2.31□□□□□ -2.04
HSH49YOR319W YOR015WQ12169 119 aa2.31□□□□□ -2.04
HSH49YOR319W SFK1P35735 353 aa2.3□□□□□ -2.04
HSH49YOR319W YAP3P38749 330 aa2.3□□□□□ -2.04
HSH49YOR319W SOK1P40317 901 aa2.3□□□□□ -2.04
HSH49YOR319W YPL073CP40323 161 aa2.3□□□□□ -2.04
HSH49YOR319W YOR381W-AQ3E804 55 aa2.3□□□□□ -2.04
HSH49YOR319W YLR422WQ06409 1932 aa2.3□□□□□ -2.04
HSH49YOR319W FLO9P39712 1322 aa2.29□□□□□ -2.04
HSH49YOR319W ACP1P32463 125 aa2.29□□□□□ -2.04
HSH49YOR319W GSP2P32836 220 aaKnown RBP2.29□□□□□ -2.04
HSH49YOR319W PTC1P35182 281 aa2.29□□□□□ -2.04
HSH49YOR319W RIO2P40160 425 aaKnown RBP2.29□□□□□ -2.04
HSH49YOR319W THG1P53215 237 aaKnown RBP2.29□□□□□ -2.04
HSH49YOR319W TAF2P23255 1407 aa2.28□□□□□ -2.04
HSH49YOR319W YHL018WP38744 120 aaPredicted RBP2.28□□□□□ -2.04
HSH49YOR319W YEL028WP39989 153 aa2.28□□□□□ -2.04
HSH49YOR319W YER135CP40082 130 aa2.28□□□□□ -2.04
HSH49YOR319W FIP1P45976 327 aa2.28□□□□□ -2.04
HSH49YOR319W PIR1Q03178 341 aa2.28□□□□□ -2.04
HSH49YOR319W DML1Q03652 475 aa2.28□□□□□ -2.04
HSH49YOR319W YRA2P36036 203 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
HSH49YOR319W YEL073CP39974 107 aa2.27□□□□□ -2.05
HSH49YOR319W YDR391CQ04170 232 aa2.27□□□□□ -2.05
HSH49YOR319W YHR007C-AQ07074 71 aa2.27□□□□□ -2.05
HSH49YOR319W MDM35O60200 86 aa2.26□□□□□ -2.05
HSH49YOR319W COX8P04039 78 aa2.26□□□□□ -2.05
HSH49YOR319W UPS2P35200 230 aa2.26□□□□□ -2.05
HSH49YOR319W YKR045CP36138 183 aa2.26□□□□□ -2.05
HSH49YOR319W YBR219CP38317 127 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms