RNA–Protein interactions for RNA: YOL139C

CDC33, Transcript of mRNA cap binding protein and translation initiation factor eIF4E, yeast

Gene CDC33, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC33	YOL139C	RRP17	Q04031	235 aa	Predicted RBP	0.28	□□□□□ -2.36
CDC33	YOL139C	ELP6	Q04868	273 aa		0.28	□□□□□ -2.36
CDC33	YOL139C	UPS1	Q05776	175 aa		0.28	□□□□□ -2.36
CDC33	YOL139C	YPR127W	Q06494	345 aa		0.28	□□□□□ -2.36
CDC33	YOL139C	YOL014W	Q08110	124 aa		0.28	□□□□□ -2.36
CDC33	YOL139C	YIL177C	P40434	1758 aa		0.27	□□□□□ -2.37
CDC33	YOL139C	YJL225C	P40889	1758 aa		0.27	□□□□□ -2.37
CDC33	YOL139C	RPB4	P20433	221 aa	Predicted RBP	0.27	□□□□□ -2.37
CDC33	YOL139C	AHT1	P29589	182 aa		0.27	□□□□□ -2.37
CDC33	YOL139C	GSP2	P32836	220 aa	Known RBP	0.27	□□□□□ -2.37
CDC33	YOL139C	CLG1	P35190	452 aa		0.27	□□□□□ -2.37
CDC33	YOL139C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.27	□□□□□ -2.37	not detected
CDC33	YOL139C	SHB17	P36136	271 aa	Known RBP	0.27	□□□□□ -2.37
CDC33	YOL139C	RRT1	P38192	103 aa		0.27	□□□□□ -2.37
CDC33	YOL139C	NSA2	P40078	261 aa	Known RBP	0.27	□□□□□ -2.37
CDC33	YOL139C	GLC8	P41818	229 aa		0.27	□□□□□ -2.37
CDC33	YOL139C	DCV1	P43595	202 aa		0.27	□□□□□ -2.37
CDC33	YOL139C	APS3	P47064	194 aa		0.27	□□□□□ -2.37
CDC33	YOL139C	PAC10	P48363	199 aa		0.27	□□□□□ -2.37
CDC33	YOL139C	MMS2	P53152	137 aa		0.27	□□□□□ -2.37
CDC33	YOL139C	MRPS17	Q03246	237 aa	Predicted RBP	0.27	□□□□□ -2.37
CDC33	YOL139C	DML1	Q03652	475 aa		0.27	□□□□□ -2.37
CDC33	YOL139C	GRX3	Q03835	250 aa		0.27	□□□□□ -2.37
CDC33	YOL139C	FUS2	Q05670	677 aa		0.27	□□□□□ -2.37
CDC33	YOL139C	FYV12	Q08559	129 aa		0.27	□□□□□ -2.37
CDC33	YOL139C	ADF1	Q2V2Q1	113 aa		0.27	□□□□□ -2.37
CDC33	YOL139C	YML100W-A	Q8TGT0	57 aa		0.27	□□□□□ -2.37
CDC33	YOL139C	STF2	P16965	84 aa		0.26	□□□□□ -2.37
CDC33	YOL139C	YKT6	P36015	200 aa	Known RBP	0.26	□□□□□ -2.37
CDC33	YOL139C	YKR070W	P36151	352 aa	Known RBP	0.26	□□□□□ -2.37
CDC33	YOL139C	NSG1	P38837	291 aa		0.26	□□□□□ -2.37
CDC33	YOL139C	AIM2	P39721	246 aa		0.26	□□□□□ -2.37
CDC33	YOL139C	CCS1	P40202	249 aa	Known RBP	0.26	□□□□□ -2.37
CDC33	YOL139C	JAC1	P53193	184 aa		0.26	□□□□□ -2.37
CDC33	YOL139C	FIT1	Q04433	528 aa		0.26	□□□□□ -2.37
CDC33	YOL139C	GAL83	Q04739	417 aa		0.26	□□□□□ -2.37
CDC33	YOL139C	YLR036C	Q07986	203 aa		0.26	□□□□□ -2.37
CDC33	YOL139C	DGK1	Q12382	290 aa		0.26	□□□□□ -2.37
CDC33	YOL139C	MPD1	Q12404	318 aa	Known RBP	0.26	□□□□□ -2.37
CDC33	YOL139C	YMR030W-A	Q3E760	96 aa		0.26	□□□□□ -2.37
CDC33	YOL139C	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.26	□□□□□ -2.37
CDC33	YOL139C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.25	□□□□□ -2.37
CDC33	YOL139C	RPS24A	P0CX31	135 aa	Known RBP	0.25	□□□□□ -2.37
CDC33	YOL139C	RPS24B	P0CX32	135 aa	Known RBP	0.25	□□□□□ -2.37
CDC33	YOL139C	SEC14	P24280	304 aa	Known RBP	0.25	□□□□□ -2.37
CDC33	YOL139C	AHC2	P25649	128 aa		0.25	□□□□□ -2.37
CDC33	YOL139C	CPR5	P35176	225 aa		0.25	□□□□□ -2.37
CDC33	YOL139C	YKR041W	P36134	250 aa		0.25	□□□□□ -2.37
CDC33	YOL139C	YAR064W	P39563	99 aa		0.25	□□□□□ -2.37
CDC33	YOL139C	HHY1	P39982	102 aa		0.25	□□□□□ -2.37
CDC33	YOL139C	YFL051C	P43552	160 aa		0.25	□□□□□ -2.37
CDC33	YOL139C	TMA22	P47089	198 aa	Predicted RBP	0.25	□□□□□ -2.37
CDC33	YOL139C	SOL1	P50278	321 aa		0.25	□□□□□ -2.37
CDC33	YOL139C	RTC4	P53850	401 aa		0.25	□□□□□ -2.37
CDC33	YOL139C	SED1	Q01589	338 aa		0.25	□□□□□ -2.37
CDC33	YOL139C	RIM9	Q04734	239 aa		0.25	□□□□□ -2.37
CDC33	YOL139C	KEI1	Q06346	221 aa		0.25	□□□□□ -2.37
CDC33	YOL139C	YOL024W	Q08172	172 aa		0.25	□□□□□ -2.37
CDC33	YOL139C	ATG41	Q12048	136 aa		0.25	□□□□□ -2.37
CDC33	YOL139C	RIB3	Q99258	208 aa		0.25	□□□□□ -2.37
CDC33	YOL139C	MATALPHA2	P0CY08	210 aa		0.24	□□□□□ -2.37
CDC33	YOL139C	HMLALPHA2	P0CY09	210 aa		0.24	□□□□□ -2.37
CDC33	YOL139C	CBF1	P17106	351 aa		0.24	□□□□□ -2.37
CDC33	YOL139C	NTG1	P31378	399 aa		0.24	□□□□□ -2.37
CDC33	YOL139C	FMP32	P43557	207 aa		0.24	□□□□□ -2.37
CDC33	YOL139C	YJR015W	P47090	510 aa		0.24	□□□□□ -2.37
CDC33	YOL139C	TTI2	P47168	421 aa		0.24	□□□□□ -2.37
CDC33	YOL139C	YDC1	Q02896	317 aa		0.24	□□□□□ -2.37
CDC33	YOL139C	TMA23	Q03525	211 aa		0.24	□□□□□ -2.37
CDC33	YOL139C	GPI17	Q04080	534 aa		0.24	□□□□□ -2.37
CDC33	YOL139C	IGO2	Q9P305	131 aa		0.24	□□□□□ -2.37
CDC33	YOL139C	APA2	P22108	325 aa		0.23	□□□□□ -2.37
CDC33	YOL139C	YKL102C	P34249	101 aa		0.23	□□□□□ -2.37
CDC33	YOL139C	ATG8	P38182	117 aa	RIP-Chip data	0.23	□□□□□ -2.37	not detected
CDC33	YOL139C	PIR1	Q03178	341 aa		0.23	□□□□□ -2.37
CDC33	YOL139C	HPT1	Q04178	221 aa	Known RBP	0.23	□□□□□ -2.37
CDC33	YOL139C	AVO2	Q04749	426 aa		0.23	□□□□□ -2.37
CDC33	YOL139C	NOC4	Q06512	552 aa	Predicted RBP	0.23	□□□□□ -2.37
CDC33	YOL139C	PRM3	Q08931	133 aa		0.23	□□□□□ -2.37
CDC33	YOL139C	YLR422W	Q06409	1932 aa		0.23	□□□□□ -2.37
CDC33	YOL139C	HFA1	P32874	2273 aa		0.22	□□□□□ -2.37
CDC33	YOL139C	KIN28	P06242	306 aa		0.22	□□□□□ -2.37
CDC33	YOL139C	INO4	P13902	151 aa		0.22	□□□□□ -2.37
CDC33	YOL139C	YCR001W	P25347	104 aa		0.22	□□□□□ -2.37
CDC33	YOL139C	HSP30	P25619	332 aa		0.22	□□□□□ -2.37
CDC33	YOL139C	TAH1	P25638	111 aa	Predicted RBP	0.22	□□□□□ -2.37
CDC33	YOL139C	NVJ1	P38881	321 aa		0.22	□□□□□ -2.37
CDC33	YOL139C	YEL073C	P39974	107 aa		0.22	□□□□□ -2.37
CDC33	YOL139C	RFC2	P40348	353 aa		0.22	□□□□□ -2.37
CDC33	YOL139C	CCC1	P47818	322 aa		0.22	□□□□□ -2.37
CDC33	YOL139C	NQM1	P53228	333 aa	Predicted RBP	0.22	□□□□□ -2.37
CDC33	YOL139C	AIM34	Q03673	198 aa		0.22	□□□□□ -2.37
CDC33	YOL139C	GRX8	Q05926	109 aa		0.22	□□□□□ -2.37
CDC33	YOL139C	YPR014C	Q6B0W2	109 aa		0.22	□□□□□ -2.37
CDC33	YOL139C	DUR1,2	P32528	1835 aa	Known RBP	0.22	□□□□□ -2.37
CDC33	YOL139C	SPS2	P08459	502 aa		0.21	□□□□□ -2.38
CDC33	YOL139C	NUF2	P33895	451 aa		0.21	□□□□□ -2.38
CDC33	YOL139C	SHG1	P38337	142 aa		0.21	□□□□□ -2.38
CDC33	YOL139C	YKR005C	Q02203	525 aa		0.21	□□□□□ -2.38
CDC33	YOL139C	SNO1	Q03144	224 aa		0.21	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms