RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W IDP1P21954 428 aaKnown RBP1.5□□□□□ -2.17
SRP1YNL189W BUB2P26448 306 aaPredicted RBP1.5□□□□□ -2.17
SRP1YNL189W YBR209WP38311 105 aa1.5□□□□□ -2.17
SRP1YNL189W SER2P42941 309 aa1.5□□□□□ -2.17
SRP1YNL189W FMP32P43557 207 aa1.5□□□□□ -2.17
SRP1YNL189W YFL019CP43576 117 aa1.5□□□□□ -2.17
SRP1YNL189W CCC1P47818 322 aa1.5□□□□□ -2.17
SRP1YNL189W VMA10P48836 114 aaKnown RBP1.5□□□□□ -2.17
SRP1YNL189W DYN3Q04949 312 aa1.5□□□□□ -2.17
SRP1YNL189W SHH4Q06236 168 aa1.5□□□□□ -2.17
SRP1YNL189W YDL085C-AQ3E7B7 68 aaKnown RBP1.5□□□□□ -2.17
SRP1YNL189W RAD50P12753 1312 aa1.49□□□□□ -2.17
SRP1YNL189W RPO41P13433 1351 aaKnown RBP1.49□□□□□ -2.17
SRP1YNL189W FPR1P20081 114 aaKnown RBP1.49□□□□□ -2.17
SRP1YNL189W HSP30P25619 332 aa1.49□□□□□ -2.17
SRP1YNL189W TMA19P35691 167 aaKnown RBP1.49□□□□□ -2.17
SRP1YNL189W YNL200CP40165 246 aaKnown RBP1.49□□□□□ -2.17
SRP1YNL189W MPA43P53583 542 aaPredicted RBP1.49□□□□□ -2.17
SRP1YNL189W YDR476CQ03362 224 aa1.49□□□□□ -2.17
SRP1YNL189W HPT1Q04178 221 aaKnown RBP1.49□□□□□ -2.17
SRP1YNL189W DGA1Q08650 418 aa1.49□□□□□ -2.17
SRP1YNL189W YOR289WQ12012 251 aaPredicted RBP1.49□□□□□ -2.17
SRP1YNL189W RAD28Q12021 506 aa1.49□□□□□ -2.17
SRP1YNL189W DGK1Q12382 290 aa1.49□□□□□ -2.17
SRP1YNL189W TAF2P23255 1407 aa1.49□□□□□ -2.17
SRP1YNL189W SPO13P23624 291 aa1.48□□□□□ -2.17
SRP1YNL189W SHE2P36068 246 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
SRP1YNL189W YEA4P40004 342 aa1.48□□□□□ -2.17
SRP1YNL189W TDA4P47153 279 aa1.48□□□□□ -2.17
SRP1YNL189W RCF2P53721 224 aa1.48□□□□□ -2.17
SRP1YNL189W YPD1Q07688 167 aa1.48□□□□□ -2.17
SRP1YNL189W YOL014WQ08110 124 aa1.48□□□□□ -2.17
SRP1YNL189W FYV12Q08559 129 aa1.48□□□□□ -2.17
SRP1YNL189W YPR202WQ08993 238 aa1.48□□□□□ -2.17
SRP1YNL189W DAS2Q12084 232 aa1.48□□□□□ -2.17
SRP1YNL189W MPD1Q12404 318 aaKnown RBP1.48□□□□□ -2.17
SRP1YNL189W YLR361C-AQ3E795 98 aa1.48□□□□□ -2.17
SRP1YNL189W FAS1P07149 2051 aaKnown RBP1.48□□□□□ -2.17
SRP1YNL189W CMD1P06787 147 aaKnown RBP1.48□□□□□ -2.17
SRP1YNL189W GPA2P10823 449 aa1.48□□□□□ -2.17
SRP1YNL189W SEC14P24280 304 aaKnown RBP1.48□□□□□ -2.17
SRP1YNL189W TFC1P32367 649 aa1.48□□□□□ -2.17
SRP1YNL189W SFK1P35735 353 aa1.48□□□□□ -2.17
SRP1YNL189W FYV4P38783 130 aaPredicted RBP1.48□□□□□ -2.17
SRP1YNL189W PHB1P40961 287 aa1.48□□□□□ -2.17
SRP1YNL189W APS3P47064 194 aa1.48□□□□□ -2.17
SRP1YNL189W GPI14P47088 403 aaKnown RBP1.48□□□□□ -2.17
SRP1YNL189W ORM1P53224 222 aa1.48□□□□□ -2.17
SRP1YNL189W YLR046CQ12253 270 aa1.48□□□□□ -2.17
SRP1YNL189W YAR023CD6VPM8 179 aa1.47□□□□□ -2.17
SRP1YNL189W TOP2P06786 1428 aaKnown RBP1.47□□□□□ -2.17
SRP1YNL189W SEC11P15367 167 aa1.47□□□□□ -2.17
SRP1YNL189W PEX34P25584 144 aa1.47□□□□□ -2.17
SRP1YNL189W UTP11P34247 250 aaPredicted RBP1.47□□□□□ -2.17
SRP1YNL189W PAN3P36102 679 aaPredicted RBP1.47□□□□□ -2.17
SRP1YNL189W TVP38P36164 337 aa1.47□□□□□ -2.17
SRP1YNL189W MOG1P47123 218 aa1.47□□□□□ -2.17
SRP1YNL189W DYN2Q02647 92 aa1.47□□□□□ -2.17
SRP1YNL189W YMR099CQ03161 297 aaKnown RBP1.47□□□□□ -2.17
SRP1YNL189W PLP1Q04004 230 aa1.47□□□□□ -2.17
SRP1YNL189W THI74Q04083 370 aa1.47□□□□□ -2.17
SRP1YNL189W YDR278CQ05612 105 aa1.47□□□□□ -2.17
SRP1YNL189W YOR342CQ12182 319 aa1.47□□□□□ -2.17
SRP1YNL189W EFG1Q3E705 233 aaKnown RBP1.47□□□□□ -2.17
SRP1YNL189W SLO1Q3E784 85 aa1.47□□□□□ -2.17
SRP1YNL189W RIB3Q99258 208 aa1.47□□□□□ -2.17
SRP1YNL189W Q0144Q9ZZW2 109 aa1.47□□□□□ -2.17
SRP1YNL189W SKI3P17883 1432 aaKnown RBP1.46□□□□□ -2.18
SRP1YNL189W SNT2P53127 1403 aa1.46□□□□□ -2.18
SRP1YNL189W UBI4P0CG63 381 aaKnown RBP1.46□□□□□ -2.18
SRP1YNL189W SUA7P29055 345 aaPredicted RBP1.46□□□□□ -2.18
SRP1YNL189W RPS1AP33442 255 aaKnown RBP1.46□□□□□ -2.18
SRP1YNL189W PRS3P38689 320 aaKnown RBP1.46□□□□□ -2.18
SRP1YNL189W TVP23P38962 199 aa1.46□□□□□ -2.18
SRP1YNL189W YER137CP40083 148 aaKnown RBP1.46□□□□□ -2.18
SRP1YNL189W RFC2P40348 353 aa1.46□□□□□ -2.18
SRP1YNL189W YJR015WP47090 510 aa1.46□□□□□ -2.18
SRP1YNL189W TTI2P47168 421 aa1.46□□□□□ -2.18
SRP1YNL189W PKR1Q03880 122 aaKnown RBP1.46□□□□□ -2.18
SRP1YNL189W YDL180WQ12301 547 aa1.46□□□□□ -2.18
SRP1YNL189W YML100W-AQ8TGT0 57 aa1.46□□□□□ -2.18
SRP1YNL189W ODC2Q99297 307 aa1.46□□□□□ -2.18
SRP1YNL189W PBI2P0CT04 75 aaKnown RBP1.45□□□□□ -2.18
SRP1YNL189W IPI1P38803 334 aaPredicted RBP1.45□□□□□ -2.18
SRP1YNL189W TMA20P89886 181 aaPredicted RBP1.45□□□□□ -2.18
SRP1YNL189W UBC7Q02159 165 aa1.45□□□□□ -2.18
SRP1YNL189W RAV2Q03956 351 aa1.45□□□□□ -2.18
SRP1YNL189W CUE4Q04201 117 aaPredicted RBP1.45□□□□□ -2.18
SRP1YNL189W PHO85P17157 305 aa1.44□□□□□ -2.18
SRP1YNL189W GSP1P32835 219 aaKnown RBP1.44□□□□□ -2.18
SRP1YNL189W GSP2P32836 220 aaKnown RBP1.44□□□□□ -2.18
SRP1YNL189W TRS20P38334 175 aa1.44□□□□□ -2.18
SRP1YNL189W YER134CP40081 178 aa1.44□□□□□ -2.18
SRP1YNL189W YPL073CP40323 161 aa1.44□□□□□ -2.18
SRP1YNL189W ALB1P47019 175 aaPredicted RBP1.44□□□□□ -2.18
SRP1YNL189W YGL101WP53144 215 aa1.44□□□□□ -2.18
SRP1YNL189W PST2Q12335 198 aaKnown RBP1.44□□□□□ -2.18
SRP1YNL189W KIN28P06242 306 aa1.44□□□□□ -2.18
SRP1YNL189W TIR1P10863 254 aa1.44□□□□□ -2.18
SRP1YNL189W NSG1P38837 291 aa1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 76.8 ms