RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A YPL264CQ08980 353 aa2.28□□□□□ -2.04
YSF3YNL138W-A SNU23Q12368 194 aaPredicted RBP2.28□□□□□ -2.04
YSF3YNL138W-A YKL183C-AQ3E765 70 aa2.28□□□□□ -2.04
YSF3YNL138W-A QCR7P00128 127 aa2.27□□□□□ -2.05
YSF3YNL138W-A HTB1P02293 131 aaKnown RBP2.27□□□□□ -2.05
YSF3YNL138W-A HTB2P02294 131 aa2.27□□□□□ -2.05
YSF3YNL138W-A IDH1P28834 360 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
YSF3YNL138W-A HOM6P31116 359 aaKnown RBP2.27□□□□□ -2.05
YSF3YNL138W-A ACP1P32463 125 aa2.27□□□□□ -2.05
YSF3YNL138W-A ALK2P32789 676 aaPredicted RBP2.27□□□□□ -2.05
YSF3YNL138W-A CBT1P36038 271 aaPredicted RBP2.27□□□□□ -2.05
YSF3YNL138W-A SHG1P38337 142 aa2.27□□□□□ -2.05
YSF3YNL138W-A MIC12P38341 106 aa2.27□□□□□ -2.05
YSF3YNL138W-A MPC1P53157 130 aaKnown RBP2.27□□□□□ -2.05
YSF3YNL138W-A YNL010WP53981 241 aaKnown RBP2.27□□□□□ -2.05
YSF3YNL138W-A YDR274CP87283 123 aa2.27□□□□□ -2.05
YSF3YNL138W-A SEC13Q04491 297 aaKnown RBP2.27□□□□□ -2.05
YSF3YNL138W-A SML1Q04964 104 aa2.27□□□□□ -2.05
YSF3YNL138W-A FAR8Q05040 523 aa2.27□□□□□ -2.05
YSF3YNL138W-A YPR098CQ06089 161 aa2.27□□□□□ -2.05
YSF3YNL138W-A RDS3Q06835 107 aaPredicted RBP2.27□□□□□ -2.05
YSF3YNL138W-A RIO1Q12196 484 aaKnown RBP2.27□□□□□ -2.05
YSF3YNL138W-A YCT1Q12235 531 aa2.27□□□□□ -2.05
YSF3YNL138W-A ATO3Q12359 275 aa2.27□□□□□ -2.05
YSF3YNL138W-A DCN1Q12395 269 aa2.27□□□□□ -2.05
YSF3YNL138W-A FBA1P14540 359 aaKnown RBP2.26□□□□□ -2.05
YSF3YNL138W-A PHO85P17157 305 aa2.26□□□□□ -2.05
YSF3YNL138W-A DPB2P24482 689 aaPredicted RBP2.26□□□□□ -2.05
YSF3YNL138W-A ROX3P25046 220 aa2.26□□□□□ -2.05
YSF3YNL138W-A POF1P25576 258 aa2.26□□□□□ -2.05
YSF3YNL138W-A IMP1P28627 190 aa2.26□□□□□ -2.05
YSF3YNL138W-A EDC2P40023 145 aaPredicted RBP2.26□□□□□ -2.05
YSF3YNL138W-A RGI1P40043 161 aaPredicted RBP2.26□□□□□ -2.05
YSF3YNL138W-A YFR035CP43608 114 aa2.26□□□□□ -2.05
YSF3YNL138W-A IRC18P47056 224 aa2.26□□□□□ -2.05
YSF3YNL138W-A NUP57P48837 541 aa2.26□□□□□ -2.05
YSF3YNL138W-A CWC23P52868 283 aaPredicted RBP2.26□□□□□ -2.05
YSF3YNL138W-A MGA1P53050 456 aa2.26□□□□□ -2.05
YSF3YNL138W-A USE1P53146 245 aa2.26□□□□□ -2.05
YSF3YNL138W-A CAB4P53332 305 aa2.26□□□□□ -2.05
YSF3YNL138W-A DML1Q03652 475 aa2.26□□□□□ -2.05
YSF3YNL138W-A GPI17Q04080 534 aa2.26□□□□□ -2.05
YSF3YNL138W-A PEX10Q05568 337 aa2.26□□□□□ -2.05
YSF3YNL138W-A DXO1Q06349 442 aa2.26□□□□□ -2.05
YSF3YNL138W-A SAS5Q99314 248 aa2.26□□□□□ -2.05
YSF3YNL138W-A YMR316C-AI2HB70 103 aa2.25□□□□□ -2.05
YSF3YNL138W-A MSW1P04803 379 aa2.25□□□□□ -2.05
YSF3YNL138W-A PET494P07390 489 aaPredicted RBP2.25□□□□□ -2.05
YSF3YNL138W-A YCR025CP25352 136 aa2.25□□□□□ -2.05
YSF3YNL138W-A YKL075CP36083 450 aa2.25□□□□□ -2.05
YSF3YNL138W-A MRPL17P36528 281 aa2.25□□□□□ -2.05
YSF3YNL138W-A YNL194CP40169 301 aa2.25□□□□□ -2.05
YSF3YNL138W-A POG1P40473 351 aa2.25□□□□□ -2.05
YSF3YNL138W-A MRPL49P40858 161 aaPredicted RBP2.25□□□□□ -2.05
YSF3YNL138W-A XPT1P47165 209 aa2.25□□□□□ -2.05
YSF3YNL138W-A MAL13P53338 473 aa2.25□□□□□ -2.05
YSF3YNL138W-A YML018CQ03730 393 aa2.25□□□□□ -2.05
YSF3YNL138W-A YDR248CQ03786 193 aa2.25□□□□□ -2.05
YSF3YNL138W-A YHP1Q04116 353 aa2.25□□□□□ -2.05
YSF3YNL138W-A PRM3Q08931 133 aa2.25□□□□□ -2.05
YSF3YNL138W-A IES3Q12345 250 aa2.25□□□□□ -2.05
YSF3YNL138W-A YOL163WP0CF20 169 aa2.24□□□□□ -2.05
YSF3YNL138W-A PRE7P23724 241 aaKnown RBP2.24□□□□□ -2.05
YSF3YNL138W-A RFA3P26755 122 aaKnown RBP2.24□□□□□ -2.05
YSF3YNL138W-A RPC19P28000 142 aaKnown RBP2.24□□□□□ -2.05
YSF3YNL138W-A QRI5P32344 111 aa2.24□□□□□ -2.05
YSF3YNL138W-A SMB1P40018 196 aaKnown RBP2.24□□□□□ -2.05
YSF3YNL138W-A YJL144WP47009 104 aa2.24□□□□□ -2.05
YSF3YNL138W-A YJL016WP47072 561 aa2.24□□□□□ -2.05
YSF3YNL138W-A YJR056CP47115 236 aa2.24□□□□□ -2.05
YSF3YNL138W-A MCM22P47167 239 aa2.24□□□□□ -2.05
YSF3YNL138W-A TPN1P53099 579 aa2.24□□□□□ -2.05
YSF3YNL138W-A FYV6P53913 173 aa2.24□□□□□ -2.05
YSF3YNL138W-A NUP49Q02199 472 aa2.24□□□□□ -2.05
YSF3YNL138W-A YML108WQ03759 105 aa2.24□□□□□ -2.05
YSF3YNL138W-A TVP15Q03860 143 aa2.24□□□□□ -2.05
YSF3YNL138W-A YPR063CQ12160 140 aa2.24□□□□□ -2.05
YSF3YNL138W-A YAL063C-AQ3E791 96 aa2.24□□□□□ -2.05
YSF3YNL138W-A YDR157WA0A023PZE8 133 aa2.23□□□□□ -2.05
YSF3YNL138W-A RPL28P02406 149 aaKnown RBP2.23□□□□□ -2.05
YSF3YNL138W-A QCR2P07257 368 aa2.23□□□□□ -2.05
YSF3YNL138W-A TRR1P29509 319 aaKnown RBP2.23□□□□□ -2.05
YSF3YNL138W-A MRPL3P36516 390 aa2.23□□□□□ -2.05
YSF3YNL138W-A POP7P38291 140 aa2.23□□□□□ -2.05
YSF3YNL138W-A SMX2P40204 77 aaKnown RBP2.23□□□□□ -2.05
YSF3YNL138W-A YGR201CP42936 225 aa2.23□□□□□ -2.05
YSF3YNL138W-A YFR045WP43617 309 aa2.23□□□□□ -2.05
YSF3YNL138W-A YGL159WP53110 370 aa2.23□□□□□ -2.05
YSF3YNL138W-A YNL095CP53932 642 aa2.23□□□□□ -2.05
YSF3YNL138W-A DIG2Q03373 323 aaKnown RBP2.23□□□□□ -2.05
YSF3YNL138W-A MIX17Q03667 156 aa2.23□□□□□ -2.05
YSF3YNL138W-A HEM25Q07534 307 aa2.23□□□□□ -2.05
YSF3YNL138W-A SYC1Q08553 188 aaPredicted RBP2.23□□□□□ -2.05
YSF3YNL138W-A YPL119C-AQ3E751 87 aa2.23□□□□□ -2.05
YSF3YNL138W-A URA6P15700 204 aa2.22□□□□□ -2.05
YSF3YNL138W-A CDC10P25342 322 aaKnown RBP2.22□□□□□ -2.05
YSF3YNL138W-A NTF2P33331 125 aaKnown RBP2.22□□□□□ -2.05
YSF3YNL138W-A ECM31P38122 312 aa2.22□□□□□ -2.05
YSF3YNL138W-A ECM33P38248 429 aaKnown RBP2.22□□□□□ -2.05
YSF3YNL138W-A MED8P38304 223 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms