RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	SRB6	P32570	121 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	RPB7	P34087	171 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	ERV15	P38312	142 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	YMR262W	P38430	313 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	PRS2	P38620	318 aa	Known RBP	2.86	□□□□□ -1.95
TPM1	YNL079C	YEA6	P39953	335 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	YER084W	P40057	128 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	FLX1	P40464	311 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	DFG10	P40526	253 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	PHB1	P40961	287 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	RPA34	P47006	233 aa	Predicted RBP	2.86	□□□□□ -1.95
TPM1	YNL079C	MRX5	P47007	382 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	SLX9	P53251	210 aa	Predicted RBP	2.86	□□□□□ -1.95
TPM1	YNL079C	VPS28	Q02767	242 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	LIP2	Q06005	328 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	YPR098C	Q06089	161 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	PIN3	Q06449	215 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	RAF1	Q06891	181 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	RRS1	Q08746	203 aa	Known RBP	2.86	□□□□□ -1.95
TPM1	YNL079C	FRE8	Q12209	686 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	MPD1	Q12404	318 aa	Known RBP	2.86	□□□□□ -1.95
TPM1	YNL079C	YPR108W-A	Q3E7B3	70 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	HEM4	P06174	275 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	CDC50	P25656	391 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	IMP1	P28627	190 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	ERG2	P32352	222 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	CLB6	P32943	380 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	YUH1	P35127	236 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	YEA4	P40004	342 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	EMC5	P40540	141 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	MCM22	P47167	239 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	SIP18	P50263	79 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	RPN14	P53196	417 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	APJ1	P53940	528 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	ERV25	P54837	211 aa	Known RBP	2.85	□□□□□ -1.95
TPM1	YNL079C	YCL001W-A	P87012	153 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	GAT3	Q07928	141 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	SDO1	Q07953	250 aa	Known RBP	2.85	□□□□□ -1.95
TPM1	YNL079C	YOL029C	Q08187	201 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	ATP16	Q12165	160 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	FOL3	Q12676	427 aa	Predicted RBP	2.85	□□□□□ -1.95
TPM1	YNL079C	VMA9	Q3E7B6	73 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	ATG40	Q99325	256 aa		2.85	□□□□□ -1.95
TPM1	YNL079C	BRR2	P32639	2163 aa	Known RBP	2.84	□□□□□ -1.95
TPM1	YNL079C	TDH1	P00360	332 aa	Known RBP	2.84	□□□□□ -1.95
TPM1	YNL079C	SOD1	P00445	154 aa	Known RBP	2.84	□□□□□ -1.95
TPM1	YNL079C	RPL35A	P0CX84	120 aa	Known RBP	2.84	□□□□□ -1.95
TPM1	YNL079C	RPL35B	P0CX85	120 aa	Known RBP	2.84	□□□□□ -1.95
TPM1	YNL079C	NOP1	P15646	327 aa	Known RBP	2.84	□□□□□ -1.95
TPM1	YNL079C	MRS4	P23500	304 aa		2.84	□□□□□ -1.95
TPM1	YNL079C	MSK1	P32048	576 aa		2.84	□□□□□ -1.95
TPM1	YNL079C	YKL162C	P36052	402 aa		2.84	□□□□□ -1.95
TPM1	YNL079C	ECM31	P38122	312 aa		2.84	□□□□□ -1.95
TPM1	YNL079C	SHG1	P38337	142 aa		2.84	□□□□□ -1.95
TPM1	YNL079C	RFC2	P40348	353 aa		2.84	□□□□□ -1.95
TPM1	YNL079C	SLM1	P40485	686 aa		2.84	□□□□□ -1.95
TPM1	YNL079C	KEG1	P43614	200 aa		2.84	□□□□□ -1.95
TPM1	YNL079C	YJR012C	P47087	207 aa		2.84	□□□□□ -1.95
TPM1	YNL079C	FMP41	P53889	259 aa	Known RBP	2.84	□□□□□ -1.95
TPM1	YNL079C	YPL077C	Q02831	240 aa		2.84	□□□□□ -1.95
TPM1	YNL079C	YDC1	Q02896	317 aa		2.84	□□□□□ -1.95
TPM1	YNL079C	MRPS17	Q03246	237 aa	Predicted RBP	2.84	□□□□□ -1.95
TPM1	YNL079C	FIT1	Q04433	528 aa		2.84	□□□□□ -1.95
TPM1	YNL079C	UPS1	Q05776	175 aa		2.84	□□□□□ -1.95
TPM1	YNL079C	PRP11	Q07350	266 aa	Predicted RBP	2.84	□□□□□ -1.95
TPM1	YNL079C	YOL118C	Q08259	102 aa		2.84	□□□□□ -1.95
TPM1	YNL079C	YPL278C	Q08990	100 aa		2.84	□□□□□ -1.95
TPM1	YNL079C	YOR192C-C	Q3E736	78 aa		2.84	□□□□□ -1.95
TPM1	YNL079C	HUG1	Q6Q5K6	68 aa		2.84	□□□□□ -1.95
TPM1	YNL079C	GCN1	P33892	2672 aa	Known RBP	2.84	□□□□□ -1.96
TPM1	YNL079C	SLM6	P38343	150 aa		2.83	□□□□□ -1.96
TPM1	YNL079C	SPC25	P40014	221 aa		2.83	□□□□□ -1.96
TPM1	YNL079C	YJR056C	P47115	236 aa		2.83	□□□□□ -1.96
TPM1	YNL079C	HAM1	P47119	197 aa	Known RBP	2.83	□□□□□ -1.96
TPM1	YNL079C	YPL067C	Q02754	198 aa		2.83	□□□□□ -1.96
TPM1	YNL079C	YMR279C	Q03263	540 aa		2.83	□□□□□ -1.96
TPM1	YNL079C	YMR082C	Q04276	118 aa		2.83	□□□□□ -1.96
TPM1	YNL079C	YMR090W	Q04304	227 aa	Known RBP	2.83	□□□□□ -1.96
TPM1	YNL079C	RIM9	Q04734	239 aa		2.83	□□□□□ -1.96
TPM1	YNL079C	PAM18	Q07914	168 aa		2.83	□□□□□ -1.96
TPM1	YNL079C	YOR292C	Q08743	309 aa		2.83	□□□□□ -1.96
TPM1	YNL079C	AIM45	Q12480	344 aa	Known RBP	2.83	□□□□□ -1.96
TPM1	YNL079C	LSO2	Q3E772	92 aa	Known RBP	2.83	□□□□□ -1.96
TPM1	YNL079C	COA2	Q3E823	68 aa		2.83	□□□□□ -1.96
TPM1	YNL079C	PCC1	Q3E833	88 aa		2.83	□□□□□ -1.96
TPM1	YNL079C	PET494	P07390	489 aa	Predicted RBP	2.82	□□□□□ -1.96
TPM1	YNL079C	YBR292C	P38357	123 aa		2.82	□□□□□ -1.96
TPM1	YNL079C	IKI1	P38874	309 aa		2.82	□□□□□ -1.96
TPM1	YNL079C	SEN34	P39707	275 aa		2.82	□□□□□ -1.96
TPM1	YNL079C	PCL7	P40186	285 aa		2.82	□□□□□ -1.96
TPM1	YNL079C	POG1	P40473	351 aa		2.82	□□□□□ -1.96
TPM1	YNL079C	UBC13	P52490	153 aa		2.82	□□□□□ -1.96
TPM1	YNL079C	ERG25	P53045	309 aa		2.82	□□□□□ -1.96
TPM1	YNL079C	HHO1	P53551	258 aa		2.82	□□□□□ -1.96
TPM1	YNL079C	YNR066C	P53752	436 aa		2.82	□□□□□ -1.96
TPM1	YNL079C	HSK3	P69852	69 aa		2.82	□□□□□ -1.96
TPM1	YNL079C	TMA23	Q03525	211 aa		2.82	□□□□□ -1.96
TPM1	YNL079C	GMC1	Q04399	608 aa		2.82	□□□□□ -1.96
TPM1	YNL079C	API2	Q04413	109 aa		2.82	□□□□□ -1.96
TPM1	YNL079C	YPL264C	Q08980	353 aa		2.82	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms