RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C MSB2P32334 1306 aa2.42□□□□□ -2.02
CTF18YMR078C RAD51P25454 400 aa2.42□□□□□ -2.02
CTF18YMR078C SRP14P38985 146 aa2.42□□□□□ -2.02
CTF18YMR078C THG1P53215 237 aaKnown RBP2.42□□□□□ -2.02
CTF18YMR078C PRP11Q07350 266 aaPredicted RBP2.42□□□□□ -2.02
CTF18YMR078C HPT1Q04178 221 aaKnown RBP2.41□□□□□ -2.02
CTF18YMR078C FIT2Q08906 153 aa2.41□□□□□ -2.02
CTF18YMR078C COX8P04039 78 aa2.41□□□□□ -2.02
CTF18YMR078C RFC2P40348 353 aa2.41□□□□□ -2.02
CTF18YMR078C FLX1P40464 311 aa2.41□□□□□ -2.02
CTF18YMR078C YHR007C-AQ07074 71 aa2.41□□□□□ -2.02
CTF18YMR078C YNL200CP40165 246 aaKnown RBP2.4□□□□□ -2.03
CTF18YMR078C PST2Q12335 198 aaKnown RBP2.4□□□□□ -2.03
CTF18YMR078C YNL146C-AQ3E7Z1 64 aa2.4□□□□□ -2.03
CTF18YMR078C YAE1P47118 141 aaPredicted RBP2.4□□□□□ -2.03
CTF18YMR078C SEC14P24280 304 aaKnown RBP2.39□□□□□ -2.03
CTF18YMR078C FYV4P38783 130 aaPredicted RBP2.39□□□□□ -2.03
CTF18YMR078C UBC7Q02159 165 aa2.39□□□□□ -2.03
CTF18YMR078C YER121WP40076 114 aa2.38□□□□□ -2.03
CTF18YMR078C GAL83Q04739 417 aa2.38□□□□□ -2.03
CTF18YMR078C ECM4P36156 370 aa2.38□□□□□ -2.03
CTF18YMR078C PEX11Q12462 236 aa2.38□□□□□ -2.03
CTF18YMR078C NSA2P40078 261 aaKnown RBP2.37□□□□□ -2.03
CTF18YMR078C RME1P32338 300 aaKnown RBP2.37□□□□□ -2.03
CTF18YMR078C TTI2P47168 421 aa2.37□□□□□ -2.03
CTF18YMR078C SBH1P52870 82 aa2.37□□□□□ -2.03
CTF18YMR078C DAS2Q12084 232 aa2.37□□□□□ -2.03
CTF18YMR078C YLR050CQ12155 161 aaKnown RBP2.37□□□□□ -2.03
CTF18YMR078C RRT1P38192 103 aa2.36□□□□□ -2.03
CTF18YMR078C HSK3P69852 69 aa2.36□□□□□ -2.03
CTF18YMR078C YMR252CQ04814 134 aa2.36□□□□□ -2.03
CTF18YMR078C AQY2P0CD90 149 aa2.35□□□□□ -2.03
CTF18YMR078C CSH1P38287 376 aa2.35□□□□□ -2.03
CTF18YMR078C RIO2P40160 425 aaKnown RBP2.35□□□□□ -2.03
CTF18YMR078C YFH7P43591 353 aa2.35□□□□□ -2.03
CTF18YMR078C YLR422WQ06409 1932 aa2.35□□□□□ -2.03
CTF18YMR078C STP22P25604 385 aa2.34□□□□□ -2.03
CTF18YMR078C HPA3P39979 161 aa2.34□□□□□ -2.03
CTF18YMR078C HYR1P40581 163 aaKnown RBP2.34□□□□□ -2.04
CTF18YMR078C CWC27Q02770 301 aa2.34□□□□□ -2.04
CTF18YMR078C GSP2P32836 220 aaKnown RBP2.33□□□□□ -2.04
CTF18YMR078C YEL008WP40001 126 aa2.33□□□□□ -2.04
CTF18YMR078C RCE1Q03530 315 aa2.33□□□□□ -2.04
CTF18YMR078C CMC2Q3E7A4 109 aa2.33□□□□□ -2.04
CTF18YMR078C RPB7P34087 171 aa2.32□□□□□ -2.04
CTF18YMR078C SFK1P35735 353 aa2.32□□□□□ -2.04
CTF18YMR078C YHL042WP38729 150 aa2.32□□□□□ -2.04
CTF18YMR078C YFL065CP43539 102 aa2.32□□□□□ -2.04
CTF18YMR078C YOR214CQ12282 236 aa2.31□□□□□ -2.04
CTF18YMR078C ACC1Q00955 2233 aaKnown RBP2.31□□□□□ -2.04
CTF18YMR078C VPS51P36116 164 aa2.3□□□□□ -2.04
CTF18YMR078C MPM1P40364 252 aa2.3□□□□□ -2.04
CTF18YMR078C ALB1P47019 175 aaPredicted RBP2.3□□□□□ -2.04
CTF18YMR078C YOR381W-AQ3E804 55 aa2.3□□□□□ -2.04
CTF18YMR078C YCR023CP25351 611 aa2.3□□□□□ -2.04
CTF18YMR078C UPS1Q05776 175 aa2.3□□□□□ -2.04
CTF18YMR078C YPR127WQ06494 345 aa2.3□□□□□ -2.04
CTF18YMR078C YOR015WQ12169 119 aa2.3□□□□□ -2.04
CTF18YMR078C EDC3P39998 551 aaKnown RBP2.29□□□□□ -2.04
CTF18YMR078C HSP30P25619 332 aa2.29□□□□□ -2.04
CTF18YMR078C PIR1Q03178 341 aa2.29□□□□□ -2.04
CTF18YMR078C NSE4P43124 402 aa2.28□□□□□ -2.04
CTF18YMR078C YKR005CQ02203 525 aa2.28□□□□□ -2.04
CTF18YMR078C DML1Q03652 475 aa2.28□□□□□ -2.04
CTF18YMR078C RRP17Q04031 235 aaPredicted RBP2.27□□□□□ -2.05
CTF18YMR078C THI74Q04083 370 aa2.27□□□□□ -2.05
CTF18YMR078C RIM9Q04734 239 aa2.27□□□□□ -2.05
CTF18YMR078C CMD1P06787 147 aaKnown RBP2.27□□□□□ -2.05
CTF18YMR078C YHP1Q04116 353 aa2.27□□□□□ -2.05
CTF18YMR078C VPS28Q02767 242 aa2.26□□□□□ -2.05
CTF18YMR078C PLP1Q04004 230 aa2.26□□□□□ -2.05
CTF18YMR078C YCL042WP25572 119 aa2.25□□□□□ -2.05
CTF18YMR078C FES1P38260 290 aa2.25□□□□□ -2.05
CTF18YMR078C XPT1P47165 209 aa2.25□□□□□ -2.05
CTF18YMR078C ATG41Q12048 136 aa2.25□□□□□ -2.05
CTF18YMR078C UPS3Q04006 179 aa2.25□□□□□ -2.05
CTF18YMR078C RDI1Q12434 202 aa2.25□□□□□ -2.05
CTF18YMR078C VAR1P02381 398 aa2.24□□□□□ -2.05
CTF18YMR078C SEN2P16658 377 aa2.24□□□□□ -2.05
CTF18YMR078C STF2P16965 84 aa2.24□□□□□ -2.05
CTF18YMR078C YGL235WP53071 178 aa2.24□□□□□ -2.05
CTF18YMR078C YEL067CP39978 195 aa2.23□□□□□ -2.05
CTF18YMR078C SMD2Q06217 110 aaKnown RBP2.23□□□□□ -2.05
CTF18YMR078C ELP6Q04868 273 aa2.23□□□□□ -2.05
CTF18YMR078C YHR212W-AP0CX91 67 aa2.22□□□□□ -2.05
CTF18YMR078C COA3Q3E7B2 85 aa2.22□□□□□ -2.05
CTF18YMR078C NUF2P33895 451 aa2.22□□□□□ -2.05
CTF18YMR078C YEL028WP39989 153 aa2.22□□□□□ -2.05
CTF18YMR078C TIM13P53299 105 aa2.22□□□□□ -2.05
CTF18YMR078C AME1P38313 324 aa2.21□□□□□ -2.06
CTF18YMR078C CCS1P40202 249 aaKnown RBP2.2□□□□□ -2.06
CTF18YMR078C YGL101WP53144 215 aa2.2□□□□□ -2.06
CTF18YMR078C YLR053CQ12026 108 aa2.2□□□□□ -2.06
CTF18YMR078C TAR1Q8TGM6 124 aa2.2□□□□□ -2.06
CTF18YMR078C RAD6P06104 172 aa2.19□□□□□ -2.06
CTF18YMR078C MAK31P23059 88 aa2.19□□□□□ -2.06
CTF18YMR078C ETR1P38071 380 aa2.19□□□□□ -2.06
CTF18YMR078C YEL073CP39974 107 aa2.19□□□□□ -2.06
CTF18YMR078C SYM1Q06563 197 aa2.19□□□□□ -2.06
CTF18YMR078C UBI4P0CG63 381 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms