RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	TOS2	P50078	622 aa		4.15	□□□□□ -1.75
CLF1	YLR117C	SCW4	P53334	386 aa	Known RBP	4.15	□□□□□ -1.75
CLF1	YLR117C	YIP3	P53633	176 aa		4.15	□□□□□ -1.75
CLF1	YLR117C	CRZ1	P53968	678 aa		4.15	□□□□□ -1.75
CLF1	YLR117C	YMR206W	Q03695	313 aa		4.15	□□□□□ -1.75
CLF1	YLR117C	RIM9	Q04734	239 aa		4.15	□□□□□ -1.75
CLF1	YLR117C	PIN2	Q12057	282 aa		4.15	□□□□□ -1.75
CLF1	YLR117C	CCH1	P50077	2039 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	POX1	P13711	748 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	TIM23	P32897	222 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	MRPL16	P38064	232 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	XBP1	P40489	647 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	YJL213W	P40896	331 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	YOR105W	Q08504	108 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	NPC2	Q12408	173 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	RPS22B	Q3E7Y3	130 aa	Known RBP	4.14	□□□□□ -1.75
CLF1	YLR117C	MRS1	P07266	363 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	FCY2	P17064	533 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	CMC1	P36064	111 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	ELO1	P39540	310 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	YNL195C	P40168	261 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	SHR5	P41912	237 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	OST2	P46964	130 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	MIC27	P50945	234 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	YGL235W	P53071	178 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	YMR210W	Q03649	449 aa		4.14	□□□□□ -1.75
CLF1	YLR117C	YMR310C	Q04867	317 aa	Predicted RBP	4.14	□□□□□ -1.75
CLF1	YLR117C	POC4	Q12245	148 aa	Predicted RBP	4.14	□□□□□ -1.75
CLF1	YLR117C	RPL27A	P0C2H6	136 aa	Known RBP	4.13	□□□□□ -1.75
CLF1	YLR117C	RPL27B	P0C2H7	136 aa	Known RBP	4.13	□□□□□ -1.75
CLF1	YLR117C	MDH2	P22133	377 aa		4.13	□□□□□ -1.75
CLF1	YLR117C	ECM14	P38836	430 aa		4.13	□□□□□ -1.75
CLF1	YLR117C	BUD8	P41698	603 aa		4.13	□□□□□ -1.75
CLF1	YLR117C	GPI2	P46961	280 aa		4.13	□□□□□ -1.75
CLF1	YLR117C	NUP53	Q03790	475 aa		4.13	□□□□□ -1.75
CLF1	YLR117C	ARC18	Q05933	178 aa	Known RBP	4.13	□□□□□ -1.75
CLF1	YLR117C	LIP2	Q06005	328 aa		4.13	□□□□□ -1.75
CLF1	YLR117C	YTH1	Q06102	208 aa	Predicted RBP	4.13	□□□□□ -1.75
CLF1	YLR117C	SWT1	Q12104	458 aa		4.13	□□□□□ -1.75
CLF1	YLR117C	ATG40	Q99325	256 aa		4.13	□□□□□ -1.75
CLF1	YLR117C	YDR157W	A0A023PZE8	133 aa		4.12	□□□□□ -1.75
CLF1	YLR117C	SHB17	P36136	271 aa	Known RBP	4.12	□□□□□ -1.75
CLF1	YLR117C	MIC12	P38341	106 aa		4.12	□□□□□ -1.75
CLF1	YLR117C	YER076C	P40049	302 aa		4.12	□□□□□ -1.75
CLF1	YLR117C	RPL34B	P40525	121 aa	Known RBP	4.12	□□□□□ -1.75
CLF1	YLR117C	MPP6	P53725	186 aa	Predicted RBP	4.12	□□□□□ -1.75
CLF1	YLR117C	RPL34A	P87262	121 aa	Predicted RBP	4.12	□□□□□ -1.75
CLF1	YLR117C	YMR090W	Q04304	227 aa	Known RBP	4.12	□□□□□ -1.75
CLF1	YLR117C	LPP1	Q04396	274 aa		4.12	□□□□□ -1.75
CLF1	YLR117C	DGA1	Q08650	418 aa		4.12	□□□□□ -1.75
CLF1	YLR117C	JID1	Q12350	301 aa		4.12	□□□□□ -1.75
CLF1	YLR117C	RPS22A	P0C0W1	130 aa	Known RBP	4.12	□□□□□ -1.75
CLF1	YLR117C	CUP2	P15315	225 aa		4.12	□□□□□ -1.75
CLF1	YLR117C	NPR1	P22211	790 aa		4.12	□□□□□ -1.75
CLF1	YLR117C	ERG8	P24521	451 aa		4.12	□□□□□ -1.75
CLF1	YLR117C	ARO4	P32449	370 aa	Known RBP	4.12	□□□□□ -1.75
CLF1	YLR117C	SGE1	P33335	543 aa		4.12	□□□□□ -1.75
CLF1	YLR117C	PAM17	P36147	197 aa		4.12	□□□□□ -1.75
CLF1	YLR117C	UBC9	P50623	157 aa	Predicted RBP	4.12	□□□□□ -1.75
CLF1	YLR117C	UBC7	Q02159	165 aa		4.12	□□□□□ -1.75
CLF1	YLR117C	SNT309	Q06091	175 aa	Predicted RBP	4.12	□□□□□ -1.75
CLF1	YLR117C	YBL112C	Q3E7Y4	105 aa		4.12	□□□□□ -1.75
CLF1	YLR117C	UBA3	Q99344	299 aa		4.12	□□□□□ -1.75
CLF1	YLR117C	YPL229W	Q99395	206 aa		4.12	□□□□□ -1.75
CLF1	YLR117C	SOD1	P00445	154 aa	Known RBP	4.11	□□□□□ -1.75
CLF1	YLR117C	CYC3	P06182	269 aa		4.11	□□□□□ -1.75
CLF1	YLR117C	TIR2	P33890	251 aa		4.11	□□□□□ -1.75
CLF1	YLR117C	KKQ8	P36004	724 aa		4.11	□□□□□ -1.75
CLF1	YLR117C	TRM7	P38238	310 aa	Known RBP	4.11	□□□□□ -1.75
CLF1	YLR117C	YBR184W	P38299	523 aa		4.11	□□□□□ -1.75
CLF1	YLR117C	MSO1	P53604	210 aa	Known RBP	4.11	□□□□□ -1.75
CLF1	YLR117C	TRM112	P53738	135 aa	Predicted RBP	4.11	□□□□□ -1.75
CLF1	YLR117C	PAM18	Q07914	168 aa		4.11	□□□□□ -1.75
CLF1	YLR117C	PRP46	Q12417	451 aa	Predicted RBP	4.11	□□□□□ -1.75
CLF1	YLR117C	RPL12A	P0CX53	165 aa	Known RBP	4.1	□□□□□ -1.75
CLF1	YLR117C	RPL12B	P0CX54	165 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	HMRA1	P0CY11	126 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	ECM34	P38728	170 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	SRP14	P38985	146 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	YAR068W	P39564	161 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	YJR096W	P47137	282 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	YNR064C	P53750	290 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	YLR152C	P54072	576 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	VPS71	Q03433	280 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	BET5	Q03630	159 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	YLR296W	Q05898	108 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	SMT3	Q12306	101 aa	Known RBP	4.1	□□□□□ -1.75
CLF1	YLR117C	RPS28B	P0C0X0	67 aa	Known RBP	4.1	□□□□□ -1.75
CLF1	YLR117C	YBR121C-A	P0C5L4	52 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	YER039C-A	P0CD97	72 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	RPL1A	P0CX43	217 aa	Known RBP	4.1	□□□□□ -1.75
CLF1	YLR117C	RPL1B	P0CX44	217 aa	Known RBP	4.1	□□□□□ -1.75
CLF1	YLR117C	ANS1	P38832	159 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	YJL118W	P47022	219 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	YGL118C	P53132	145 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	CRH1	P53301	507 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	YDL211C	Q12121	372 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.1	□□□□□ -1.75
CLF1	YLR117C	TAD3	Q9URQ3	322 aa		4.1	□□□□□ -1.75
CLF1	YLR117C	MSB2	P32334	1306 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms