RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT1	YKL145W	STF2	P16965	84 aa		4.57	□□□□□ -1.68
RPT1	YKL145W	MIR1	P23641	311 aa	Known RBP	4.57	□□□□□ -1.68
RPT1	YKL145W	YOX1	P34161	385 aa		4.57	□□□□□ -1.68
RPT1	YKL145W	YIR035C	P40579	254 aa		4.57	□□□□□ -1.68
RPT1	YKL145W	SOL1	P50278	321 aa		4.57	□□□□□ -1.68
RPT1	YKL145W	NIF3	P53081	288 aa		4.57	□□□□□ -1.68
RPT1	YKL145W	THI74	Q04083	370 aa		4.57	□□□□□ -1.68
RPT1	YKL145W	FIT1	Q04433	528 aa		4.57	□□□□□ -1.68
RPT1	YKL145W	UPS1	Q05776	175 aa		4.57	□□□□□ -1.68
RPT1	YKL145W	YNG1	Q08465	219 aa		4.57	□□□□□ -1.68
RPT1	YKL145W	POM33	Q12164	279 aa		4.57	□□□□□ -1.68
RPT1	YKL145W	YCR024C-B	Q3E7Z8	88 aa		4.57	□□□□□ -1.68
RPT1	YKL145W	YLR365W	Q7LIF2	110 aa		4.57	□□□□□ -1.68
RPT1	YKL145W	YBR298C-A	Q8TGK4	73 aa		4.57	□□□□□ -1.68
RPT1	YKL145W	MDM10	P18409	493 aa		4.56	□□□□□ -1.68
RPT1	YKL145W	YKL187C	P34231	750 aa		4.56	□□□□□ -1.68
RPT1	YKL145W	MST27	P53176	234 aa		4.56	□□□□□ -1.68
RPT1	YKL145W	JAC1	P53193	184 aa		4.56	□□□□□ -1.68
RPT1	YKL145W	CDC39	P25655	2108 aa	Known RBP	4.56	□□□□□ -1.68
RPT1	YKL145W	QCR2	P07257	368 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	MAG1	P22134	296 aa	Known RBP	4.55	□□□□□ -1.68
RPT1	YKL145W	SEC22	P22214	214 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	RIB5	P38145	238 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	MIC12	P38341	106 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	CTR2	P38865	189 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	BMT5	P40493	336 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	GLR1	P41921	483 aa	Known RBP	4.55	□□□□□ -1.68
RPT1	YKL145W	WWM1	P43582	211 aa	Known RBP	4.55	□□□□□ -1.68
RPT1	YKL145W	TAD2	P47058	250 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	CPD1	P53314	239 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	CWC25	P53854	179 aa	Known RBP	4.55	□□□□□ -1.68
RPT1	YKL145W	HSK3	P69852	69 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	LIP2	Q06005	328 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	TMC1	Q08422	150 aa	Predicted RBP	4.55	□□□□□ -1.68
RPT1	YKL145W	CSM4	Q08955	156 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	RFM1	Q12192	310 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	YPR108W-A	Q3E7B3	70 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	ERG2	P32352	222 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	CBT1	P36038	271 aa	Predicted RBP	4.55	□□□□□ -1.68
RPT1	YKL145W	MIX23	P38162	196 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	ERG28	P40030	148 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	IRC24	P40580	263 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	YJR111C	P47148	283 aa	Known RBP	4.55	□□□□□ -1.68
RPT1	YKL145W	XPT1	P47165	209 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	YNL046W	P53956	172 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	YDR415C	Q04033	374 aa	Predicted RBP	4.55	□□□□□ -1.68
RPT1	YKL145W	GMC1	Q04399	608 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	RIM9	Q04734	239 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	RRT7	Q07829	113 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	BBP1	Q12365	385 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	TFC7	Q12415	435 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	YKL183C-A	Q3E765	70 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	HUG1	Q6Q5K6	68 aa		4.55	□□□□□ -1.68
RPT1	YKL145W	MRS4	P23500	304 aa		4.54	□□□□□ -1.68
RPT1	YKL145W	POF1	P25576	258 aa		4.54	□□□□□ -1.68
RPT1	YKL145W	AVT5	P38176	459 aa		4.54	□□□□□ -1.68
RPT1	YKL145W	YPC1	P38298	316 aa		4.54	□□□□□ -1.68
RPT1	YKL145W	PIR5	P46999	287 aa		4.54	□□□□□ -1.68
RPT1	YKL145W	YGL262W	P53054	175 aa		4.54	□□□□□ -1.68
RPT1	YKL145W	HCH1	P53834	153 aa		4.54	□□□□□ -1.68
RPT1	YKL145W	RPL21A	Q02753	160 aa	Known RBP	4.54	□□□□□ -1.68
RPT1	YKL145W	VPS28	Q02767	242 aa		4.54	□□□□□ -1.68
RPT1	YKL145W	SNA4	Q07549	140 aa		4.54	□□□□□ -1.68
RPT1	YKL145W	YOR292C	Q08743	309 aa		4.54	□□□□□ -1.68
RPT1	YKL145W	YCT1	Q12235	531 aa		4.54	□□□□□ -1.68
RPT1	YKL145W	RPL21B	Q12672	160 aa	Known RBP	4.54	□□□□□ -1.68
RPT1	YKL145W	YLR146W-A	Q2V2P1	62 aa		4.54	□□□□□ -1.68
RPT1	YKL145W	YCL048W-A	Q2V2Q2	79 aa		4.54	□□□□□ -1.68
RPT1	YKL145W	YFL068W	P0CX99	160 aa		4.53	□□□□□ -1.68
RPT1	YKL145W	YLL066W-A	P0CY00	160 aa		4.53	□□□□□ -1.68
RPT1	YKL145W	YLL067W-A	P0CY01	160 aa		4.53	□□□□□ -1.68
RPT1	YKL145W	RNA15	P25299	296 aa	Predicted RBP	4.53	□□□□□ -1.68
RPT1	YKL145W	PDC2	P32896	925 aa		4.53	□□□□□ -1.68
RPT1	YKL145W	ERV15	P38312	142 aa		4.53	□□□□□ -1.68
RPT1	YKL145W	CUE1	P38428	203 aa		4.53	□□□□□ -1.68
RPT1	YKL145W	COX14	P39103	70 aa		4.53	□□□□□ -1.68
RPT1	YKL145W	DFG10	P40526	253 aa		4.53	□□□□□ -1.68
RPT1	YKL145W	YIA6	P40556	373 aa		4.53	□□□□□ -1.68
RPT1	YKL145W	ORM1	P53224	222 aa		4.53	□□□□□ -1.68
RPT1	YKL145W	WSC2	P53832	503 aa		4.53	□□□□□ -1.68
RPT1	YKL145W	NOC4	Q06512	552 aa	Predicted RBP	4.53	□□□□□ -1.68
RPT1	YKL145W	CMC2	Q3E7A4	109 aa		4.53	□□□□□ -1.68
RPT1	YKL145W	YMR105W-A	Q8TGS8	64 aa		4.53	□□□□□ -1.68
RPT1	YKL145W	MRS3	P10566	314 aa		4.52	□□□□□ -1.69
RPT1	YKL145W	RPL16B	P26785	198 aa	Known RBP	4.52	□□□□□ -1.69
RPT1	YKL145W	PMU1	P36069	295 aa		4.52	□□□□□ -1.69
RPT1	YKL145W	VMA7	P39111	118 aa		4.52	□□□□□ -1.69
RPT1	YKL145W	SWM2	P40342	146 aa		4.52	□□□□□ -1.69
RPT1	YKL145W	RFC2	P40348	353 aa		4.52	□□□□□ -1.69
RPT1	YKL145W	PRM5	P40476	318 aa		4.52	□□□□□ -1.69
RPT1	YKL145W	ACT1	P60010	375 aa	Known RBP	4.52	□□□□□ -1.69
RPT1	YKL145W	UTP23	Q12339	254 aa	Known RBP	4.52	□□□□□ -1.69
RPT1	YKL145W	RTR2	Q12378	196 aa		4.52	□□□□□ -1.69
RPT1	YKL145W	DGK1	Q12382	290 aa		4.52	□□□□□ -1.69
RPT1	YKL145W	YMR31	P19955	123 aa		4.51	□□□□□ -1.69
RPT1	YKL145W	AGA1	P32323	725 aa		4.51	□□□□□ -1.69
RPT1	YKL145W	SRY1	P36007	326 aa		4.51	□□□□□ -1.69
RPT1	YKL145W	IKI1	P38874	309 aa		4.51	□□□□□ -1.69
RPT1	YKL145W	YNL194C	P40169	301 aa		4.51	□□□□□ -1.69
RPT1	YKL145W	YIL012W	P40551	113 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms