RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C YPR114WQ06107 315 aa1.55□□□□□ -2.16
RTT101YJL047C ATG39Q06159 398 aa1.55□□□□□ -2.16
RTT101YJL047C MCH1Q07376 486 aa1.55□□□□□ -2.16
RTT101YJL047C YER039C-AP0CD97 72 aa1.55□□□□□ -2.16
RTT101YJL047C RPC19P28000 142 aaKnown RBP1.55□□□□□ -2.16
RTT101YJL047C SRP21P32342 167 aa1.55□□□□□ -2.16
RTT101YJL047C SKG1P36169 355 aa1.55□□□□□ -2.16
RTT101YJL047C KRE9P39005 276 aa1.55□□□□□ -2.16
RTT101YJL047C BUD25P85052 153 aa1.55□□□□□ -2.16
RTT101YJL047C GAL83Q04739 417 aa1.55□□□□□ -2.16
RTT101YJL047C YMR253CQ04835 414 aa1.55□□□□□ -2.16
RTT101YJL047C YLR412C-AQ3E742 68 aa1.55□□□□□ -2.16
RTT101YJL047C YNL277W-AQ3E7Z0 62 aa1.55□□□□□ -2.16
RTT101YJL047C SPT15P13393 240 aaKnown RBP1.54□□□□□ -2.16
RTT101YJL047C VMA11P32842 164 aa1.54□□□□□ -2.16
RTT101YJL047C MRPL27P36526 146 aaPredicted RBP1.54□□□□□ -2.16
RTT101YJL047C GPI18P38211 433 aa1.54□□□□□ -2.16
RTT101YJL047C YBR220CP38318 560 aa1.54□□□□□ -2.16
RTT101YJL047C CTR2P38865 189 aa1.54□□□□□ -2.16
RTT101YJL047C YKR005CQ02203 525 aa1.54□□□□□ -2.16
RTT101YJL047C YMR099CQ03161 297 aaKnown RBP1.54□□□□□ -2.16
RTT101YJL047C TMA23Q03525 211 aa1.54□□□□□ -2.16
RTT101YJL047C SPG3Q04398 127 aaPredicted RBP1.54□□□□□ -2.16
RTT101YJL047C SRL1Q08673 210 aa1.54□□□□□ -2.16
RTT101YJL047C SPP41P38904 1435 aa1.54□□□□□ -2.16
RTT101YJL047C YAR023CD6VPM8 179 aa1.54□□□□□ -2.16
RTT101YJL047C TIM9O74700 87 aa1.54□□□□□ -2.16
RTT101YJL047C SHB17P36136 271 aaKnown RBP1.54□□□□□ -2.16
RTT101YJL047C ETR1P38071 380 aa1.54□□□□□ -2.16
RTT101YJL047C AIM2P39721 246 aa1.54□□□□□ -2.16
RTT101YJL047C YIL054WP40524 105 aa1.54□□□□□ -2.16
RTT101YJL047C YNL033WP53964 284 aa1.54□□□□□ -2.16
RTT101YJL047C YNL019CP53975 284 aa1.54□□□□□ -2.16
RTT101YJL047C YDR274CP87283 123 aa1.54□□□□□ -2.16
RTT101YJL047C SAE3P89114 91 aa1.54□□□□□ -2.16
RTT101YJL047C CWC27Q02770 301 aa1.54□□□□□ -2.16
RTT101YJL047C FCF1Q05498 189 aaPredicted RBP1.54□□□□□ -2.16
RTT101YJL047C YTH1Q06102 208 aaPredicted RBP1.54□□□□□ -2.16
RTT101YJL047C IES3Q12345 250 aa1.54□□□□□ -2.16
RTT101YJL047C ISD11Q6Q560 94 aa1.54□□□□□ -2.16
RTT101YJL047C YCL001W-BQ96VH2 84 aa1.54□□□□□ -2.16
RTT101YJL047C MYO2P19524 1574 aaKnown RBP1.53□□□□□ -2.16
RTT101YJL047C YEL009C-AA0A023PZF2 135 aa1.53□□□□□ -2.16
RTT101YJL047C RPL9AP05738 191 aaKnown RBP1.53□□□□□ -2.16
RTT101YJL047C PCL1P24867 279 aa1.53□□□□□ -2.16
RTT101YJL047C ARO2P28777 376 aaKnown RBP1.53□□□□□ -2.16
RTT101YJL047C AHT1P29589 182 aa1.53□□□□□ -2.16
RTT101YJL047C COS8P38723 381 aa1.53□□□□□ -2.16
RTT101YJL047C YHR125WP38831 101 aa1.53□□□□□ -2.16
RTT101YJL047C SMD3P43321 101 aaKnown RBP1.53□□□□□ -2.16
RTT101YJL047C RPL9BP51401 191 aaKnown RBP1.53□□□□□ -2.16
RTT101YJL047C YNR062CP53748 327 aa1.53□□□□□ -2.16
RTT101YJL047C EST3Q03096 181 aa1.53□□□□□ -2.16
RTT101YJL047C FSF1Q12029 327 aaKnown RBP1.53□□□□□ -2.16
RTT101YJL047C YBR298C-AQ8TGK4 73 aa1.53□□□□□ -2.16
RTT101YJL047C YRF1-3P0CX14 1859 aa1.53□□□□□ -2.16
RTT101YJL047C YRF1-7P0CX15 1859 aa1.53□□□□□ -2.16
RTT101YJL047C YRF1-6P53819 1859 aa1.53□□□□□ -2.16
RTT101YJL047C TSC11P40061 1430 aa1.53□□□□□ -2.16
RTT101YJL047C COX4P04037 155 aa1.52□□□□□ -2.17
RTT101YJL047C HIS3P06633 220 aa1.52□□□□□ -2.17
RTT101YJL047C RAD10P06838 210 aa1.52□□□□□ -2.17
RTT101YJL047C ADH3P07246 375 aaKnown RBP1.52□□□□□ -2.17
RTT101YJL047C HTD2P38790 280 aaKnown RBP1.52□□□□□ -2.17
RTT101YJL047C YER134CP40081 178 aa1.52□□□□□ -2.17
RTT101YJL047C RPS12P48589 143 aaKnown RBP1.52□□□□□ -2.17
RTT101YJL047C AIF1P52923 378 aa1.52□□□□□ -2.17
RTT101YJL047C YGR017WP53210 297 aa1.52□□□□□ -2.17
RTT101YJL047C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
RTT101YJL047C PPT2Q12036 173 aa1.52□□□□□ -2.17
RTT101YJL047C YOR214CQ12282 236 aa1.52□□□□□ -2.17
RTT101YJL047C YHR032W-AP0C5N6 59 aa1.52□□□□□ -2.17
RTT101YJL047C YOR062CP36025 268 aa1.52□□□□□ -2.17
RTT101YJL047C ARC15P40518 154 aaRIP-Chip data1.52□□□□□ -2.17not detected
RTT101YJL047C SBH1P52870 82 aa1.52□□□□□ -2.17
RTT101YJL047C GEP7P53171 287 aa1.52□□□□□ -2.17
RTT101YJL047C MPC3P53311 146 aa1.52□□□□□ -2.17
RTT101YJL047C AIM11P87275 137 aa1.52□□□□□ -2.17
RTT101YJL047C TVP18Q04767 167 aa1.52□□□□□ -2.17
RTT101YJL047C GPA2P10823 449 aa1.51□□□□□ -2.17
RTT101YJL047C YEL028WP39989 153 aa1.51□□□□□ -2.17
RTT101YJL047C ECO1P43605 281 aa1.51□□□□□ -2.17
RTT101YJL047C VPS28Q02767 242 aa1.51□□□□□ -2.17
RTT101YJL047C YLR042CQ07990 161 aa1.51□□□□□ -2.17
RTT101YJL047C ATP20Q12233 115 aa1.51□□□□□ -2.17
RTT101YJL047C HUT1Q12520 339 aa1.51□□□□□ -2.17
RTT101YJL047C YNL162W-AQ3E7A8 72 aa1.51□□□□□ -2.17
RTT101YJL047C TRM732Q03496 1420 aa1.51□□□□□ -2.17
RTT101YJL047C VAR1P02381 398 aa1.51□□□□□ -2.17
RTT101YJL047C NSP1P14907 823 aaKnown RBP1.51□□□□□ -2.17
RTT101YJL047C DDR48P18899 430 aaKnown RBP1.51□□□□□ -2.17
RTT101YJL047C MRS4P23500 304 aa1.51□□□□□ -2.17
RTT101YJL047C GAT4P40569 121 aa1.51□□□□□ -2.17
RTT101YJL047C GON7P46984 123 aa1.51□□□□□ -2.17
RTT101YJL047C SMD1Q02260 146 aaPredicted RBP1.51□□□□□ -2.17
RTT101YJL047C MRPS16Q02608 121 aa1.51□□□□□ -2.17
RTT101YJL047C YML122CQ03207 126 aa1.51□□□□□ -2.17
RTT101YJL047C ANT1Q06497 328 aa1.51□□□□□ -2.17
RTT101YJL047C SYM1Q06563 197 aa1.51□□□□□ -2.17
RTT101YJL047C ODC2Q99297 307 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms