RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C SIM1P40472 476 aa2.78□□□□□ -1.96
SGN1YIR001C IRC18P47056 224 aa2.78□□□□□ -1.96
SGN1YIR001C RBL2P48606 106 aaKnown RBP2.78□□□□□ -1.96
SGN1YIR001C MST27P53176 234 aa2.78□□□□□ -1.96
SGN1YIR001C RTT103Q05543 409 aa2.78□□□□□ -1.96
SGN1YIR001C YDL242WQ07746 117 aa2.78□□□□□ -1.96
SGN1YIR001C PAM18Q07914 168 aa2.78□□□□□ -1.96
SGN1YIR001C RAD28Q12021 506 aa2.78□□□□□ -1.96
SGN1YIR001C DCP1Q12517 231 aaPredicted RBP2.78□□□□□ -1.96
SGN1YIR001C YBR255C-AQ3E776 120 aa2.78□□□□□ -1.96
SGN1YIR001C SOD1P00445 154 aaKnown RBP2.77□□□□□ -1.97
SGN1YIR001C CYC3P06182 269 aa2.77□□□□□ -1.97
SGN1YIR001C MIR1P23641 311 aaKnown RBP2.77□□□□□ -1.97
SGN1YIR001C RRT1P38192 103 aa2.77□□□□□ -1.97
SGN1YIR001C LAG1P38703 411 aa2.77□□□□□ -1.97
SGN1YIR001C COS8P38723 381 aa2.77□□□□□ -1.97
SGN1YIR001C HTD2P38790 280 aaKnown RBP2.77□□□□□ -1.97
SGN1YIR001C BFR1P38934 470 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97 RIP-Chip
SGN1YIR001C YAR068WP39564 161 aa2.77□□□□□ -1.97
SGN1YIR001C POR2P40478 281 aa2.77□□□□□ -1.97
SGN1YIR001C YIL024CP40543 189 aa2.77□□□□□ -1.97
SGN1YIR001C CAT5P41735 233 aa2.77□□□□□ -1.97
SGN1YIR001C ARP3P47117 449 aaKnown RBP2.77□□□□□ -1.97
SGN1YIR001C TDA4P47153 279 aa2.77□□□□□ -1.97
SGN1YIR001C OCA2P53949 197 aa2.77□□□□□ -1.97
SGN1YIR001C RCF1Q03713 159 aa2.77□□□□□ -1.97
SGN1YIR001C ATG39Q06159 398 aa2.77□□□□□ -1.97
SGN1YIR001C KEI1Q06346 221 aa2.77□□□□□ -1.97
SGN1YIR001C MRPL35Q06678 367 aa2.77□□□□□ -1.97
SGN1YIR001C YPR013CQ12145 317 aa2.77□□□□□ -1.97
SGN1YIR001C AGC1Q12482 902 aa2.77□□□□□ -1.97
SGN1YIR001C SUS1Q6WNK7 96 aa2.77□□□□□ -1.97
SGN1YIR001C PET20Q99373 253 aa2.77□□□□□ -1.97
SGN1YIR001C CAP2P13517 287 aa2.76□□□□□ -1.97
SGN1YIR001C ECM25P32525 599 aa2.76□□□□□ -1.97
SGN1YIR001C MRPL27P36526 146 aaPredicted RBP2.76□□□□□ -1.97
SGN1YIR001C FMP23P38231 175 aa2.76□□□□□ -1.97
SGN1YIR001C GOS1P38736 223 aa2.76□□□□□ -1.97
SGN1YIR001C HAL1Q01766 294 aa2.76□□□□□ -1.97
SGN1YIR001C SCP1Q08873 200 aa2.76□□□□□ -1.97
SGN1YIR001C PRM4Q12498 284 aa2.76□□□□□ -1.97
SGN1YIR001C YGL258W-AQ3E740 77 aa2.76□□□□□ -1.97
SGN1YIR001C URA5P13298 226 aaKnown RBP2.75□□□□□ -1.97
SGN1YIR001C SIP1P32578 815 aa2.75□□□□□ -1.97
SGN1YIR001C FMT1P32785 401 aa2.75□□□□□ -1.97
SGN1YIR001C YBL071CP38185 102 aa2.75□□□□□ -1.97
SGN1YIR001C POP8P38208 133 aa2.75□□□□□ -1.97
SGN1YIR001C RTC3P38804 111 aaPredicted RBP2.75□□□□□ -1.97
SGN1YIR001C SNF11P38956 169 aa2.75□□□□□ -1.97
SGN1YIR001C SNU13P39990 126 aaKnown RBP2.75□□□□□ -1.97
SGN1YIR001C AIM20P40451 204 aa2.75□□□□□ -1.97
SGN1YIR001C DFG10P40526 253 aa2.75□□□□□ -1.97
SGN1YIR001C GAT4P40569 121 aa2.75□□□□□ -1.97
SGN1YIR001C MIC26P50087 233 aa2.75□□□□□ -1.97
SGN1YIR001C EST3Q03096 181 aa2.75□□□□□ -1.97
SGN1YIR001C THI74Q04083 370 aa2.75□□□□□ -1.97
SGN1YIR001C MGR3Q04472 501 aa2.75□□□□□ -1.97
SGN1YIR001C YOR283WQ12040 230 aaKnown RBP2.75□□□□□ -1.97
SGN1YIR001C ATG5Q12380 294 aa2.75□□□□□ -1.97
SGN1YIR001C PAA1Q12447 191 aaKnown RBP2.75□□□□□ -1.97
SGN1YIR001C YOR011W-AQ3E807 68 aa2.75□□□□□ -1.97
SGN1YIR001C ZRC1P20107 442 aa2.74□□□□□ -1.97
SGN1YIR001C UPS2P35200 230 aa2.74□□□□□ -1.97
SGN1YIR001C PAN3P36102 679 aaPredicted RBP2.74□□□□□ -1.97
SGN1YIR001C AVT5P38176 459 aa2.74□□□□□ -1.97
SGN1YIR001C NSA2P40078 261 aaKnown RBP2.74□□□□□ -1.97
SGN1YIR001C TMA20P89886 181 aaPredicted RBP2.74□□□□□ -1.97
SGN1YIR001C DYN2Q02647 92 aa2.74□□□□□ -1.97
SGN1YIR001C SYM1Q06563 197 aa2.74□□□□□ -1.97
SGN1YIR001C LDS2Q08218 356 aa2.74□□□□□ -1.97
SGN1YIR001C PEX27Q08580 376 aa2.74□□□□□ -1.97
SGN1YIR001C TIM18Q08749 192 aa2.74□□□□□ -1.97
SGN1YIR001C FEX1Q08913 375 aa2.74□□□□□ -1.97
SGN1YIR001C FEX2Q08991 375 aa2.74□□□□□ -1.97
SGN1YIR001C ATX2Q12067 313 aa2.74□□□□□ -1.97
SGN1YIR001C CPR4P25334 318 aa2.73□□□□□ -1.97
SGN1YIR001C GPX2P38143 162 aa2.73□□□□□ -1.97
SGN1YIR001C ERV15P38312 142 aa2.73□□□□□ -1.97
SGN1YIR001C VMA22P38784 181 aa2.73□□□□□ -1.97
SGN1YIR001C YHR122WP38829 231 aa2.73□□□□□ -1.97
SGN1YIR001C HPA3P39979 161 aa2.73□□□□□ -1.97
SGN1YIR001C JLP2P40206 208 aa2.73□□□□□ -1.97
SGN1YIR001C RTS2P40962 232 aa2.73□□□□□ -1.97
SGN1YIR001C GPI2P46961 280 aa2.73□□□□□ -1.97
SGN1YIR001C LSM1P47017 172 aaKnown RBP2.73□□□□□ -1.97
SGN1YIR001C AIM25P47140 327 aa2.73□□□□□ -1.97
SGN1YIR001C SGF11Q03067 99 aa2.73□□□□□ -1.97
SGN1YIR001C FMP42Q04991 504 aa2.73□□□□□ -1.97
SGN1YIR001C HTZ1Q12692 134 aaKnown RBP2.73□□□□□ -1.97
SGN1YIR001C CMC1P36064 111 aa2.72□□□□□ -1.97
SGN1YIR001C RRF1P38771 230 aa2.72□□□□□ -1.97
SGN1YIR001C GVP36P40531 326 aaKnown RBP2.72□□□□□ -1.97
SGN1YIR001C RPR2P40571 144 aa2.72□□□□□ -1.97
SGN1YIR001C YGR050CP53231 118 aa2.72□□□□□ -1.97
SGN1YIR001C YIP3P53633 176 aa2.72□□□□□ -1.97
SGN1YIR001C DCS1Q06151 350 aa2.72□□□□□ -1.97
SGN1YIR001C MSH5Q12175 901 aa2.72□□□□□ -1.97
SGN1YIR001C QCR2P07257 368 aa2.71□□□□□ -1.98
SGN1YIR001C YCR001WP25347 104 aa2.71□□□□□ -1.98
SGN1YIR001C POP5P28005 173 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms