RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C DEG1P31115 442 aaKnown RBP7.43□□□□□ -1.22
SSL2YIL143C RIM9Q04734 239 aa7.43□□□□□ -1.22
SSL2YIL143C LDS2Q08218 356 aa7.43□□□□□ -1.22
SSL2YIL143C YOR292CQ08743 309 aa7.43□□□□□ -1.22
SSL2YIL143C YPR071WQ12346 211 aa7.43□□□□□ -1.22
SSL2YIL143C MPD1Q12404 318 aaKnown RBP7.43□□□□□ -1.22
SSL2YIL143C RPL9AP05738 191 aaKnown RBP7.42□□□□□ -1.22
SSL2YIL143C SAG1P20840 650 aa7.42□□□□□ -1.22
SSL2YIL143C CUE1P38428 203 aa7.42□□□□□ -1.22
SSL2YIL143C UIP3P39547 235 aa7.42□□□□□ -1.22
SSL2YIL143C XPT1P47165 209 aa7.42□□□□□ -1.22
SSL2YIL143C RPL9BP51401 191 aaKnown RBP7.42□□□□□ -1.22
SSL2YIL143C CRH1P53301 507 aa7.42□□□□□ -1.22
SSL2YIL143C MIX14Q04341 121 aa7.42□□□□□ -1.22
SSL2YIL143C GTO3Q04806 366 aa7.42□□□□□ -1.22
SSL2YIL143C MCH2P36032 473 aa7.42□□□□□ -1.22
SSL2YIL143C SUT1P53032 299 aaKnown RBP7.42□□□□□ -1.22
SSL2YIL143C YNL165WP53891 406 aa7.42□□□□□ -1.22
SSL2YIL143C RFU1Q08003 200 aa7.42□□□□□ -1.22
SSL2YIL143C WTM2Q12206 467 aa7.42□□□□□ -1.22
SSL2YIL143C ATG40Q99325 256 aa7.42□□□□□ -1.22
SSL2YIL143C CDC40P40968 455 aaPredicted RBP7.41□□□□□ -1.22
SSL2YIL143C COX16P47081 118 aa7.41□□□□□ -1.22
SSL2YIL143C PCP1P53259 346 aa7.41□□□□□ -1.22
SSL2YIL143C TNA1P53322 534 aa7.41□□□□□ -1.22
SSL2YIL143C SDC1Q03323 175 aa7.41□□□□□ -1.22
SSL2YIL143C TCA17P32613 152 aa7.41□□□□□ -1.22
SSL2YIL143C CGI121Q03705 181 aaKnown RBP7.41□□□□□ -1.22
SSL2YIL143C CSI2Q08054 341 aa7.41□□□□□ -1.22
SSL2YIL143C POC4Q12245 148 aaPredicted RBP7.41□□□□□ -1.22
SSL2YIL143C VPS63O13549 108 aa7.4□□□□□ -1.22
SSL2YIL143C RPS22AP0C0W1 130 aaKnown RBP7.4□□□□□ -1.22
SSL2YIL143C MSI1P13712 422 aa7.4□□□□□ -1.22
SSL2YIL143C IMP1P28627 190 aa7.4□□□□□ -1.22
SSL2YIL143C COX15P40086 486 aa7.4□□□□□ -1.22
SSL2YIL143C YIP5P53108 310 aa7.4□□□□□ -1.22
SSL2YIL143C RPL21AQ02753 160 aaKnown RBP7.4□□□□□ -1.22
SSL2YIL143C ATG21Q02887 496 aa7.4□□□□□ -1.22
SSL2YIL143C LOA1Q06508 300 aa7.4□□□□□ -1.22
SSL2YIL143C RPL21BQ12672 160 aaKnown RBP7.4□□□□□ -1.22
SSL2YIL143C BEM2P39960 2167 aaKnown RBP7.4□□□□□ -1.22
SSL2YIL143C DER1P38307 211 aa7.4□□□□□ -1.23
SSL2YIL143C WSC2P53832 503 aa7.4□□□□□ -1.23
SSL2YIL143C YMR254CQ04838 102 aa7.4□□□□□ -1.23
SSL2YIL143C MIG1P27705 504 aa7.39□□□□□ -1.23
SSL2YIL143C SPS18P32572 300 aa7.39□□□□□ -1.23
SSL2YIL143C YCK3P39962 524 aa7.39□□□□□ -1.23
SSL2YIL143C YIL163CP40448 117 aa7.39□□□□□ -1.23
SSL2YIL143C GPI2P46961 280 aa7.39□□□□□ -1.23
SSL2YIL143C YPL077CQ02831 240 aa7.39□□□□□ -1.23
SSL2YIL143C FIT3Q08907 204 aa7.39□□□□□ -1.23
SSL2YIL143C YPL067CQ02754 198 aa7.39□□□□□ -1.23
SSL2YIL143C YOR376WQ08900 122 aa7.39□□□□□ -1.23
SSL2YIL143C PHD1P36093 366 aa7.38□□□□□ -1.23
SSL2YIL143C RPB11P38902 120 aa7.38□□□□□ -1.23
SSL2YIL143C YER121WP40076 114 aa7.38□□□□□ -1.23
SSL2YIL143C YOR105WQ08504 108 aa7.38□□□□□ -1.23
SSL2YIL143C SMT3Q12306 101 aaKnown RBP7.38□□□□□ -1.23
SSL2YIL143C DFR1P07807 211 aaKnown RBP RIP-Chip data7.38□□□□□ -1.23not detected
SSL2YIL143C RPL31AP0C2H8 113 aaKnown RBP7.38□□□□□ -1.23
SSL2YIL143C RPL31BP0C2H9 113 aaKnown RBP7.38□□□□□ -1.23
SSL2YIL143C YER134CP40081 178 aa7.38□□□□□ -1.23
SSL2YIL143C ARP3P47117 449 aaKnown RBP7.38□□□□□ -1.23
SSL2YIL143C GEP5Q12393 293 aa7.38□□□□□ -1.23
SSL2YIL143C PAM17P36147 197 aa7.37□□□□□ -1.23
SSL2YIL143C YIL029CP40538 142 aa7.37□□□□□ -1.23
SSL2YIL143C IZH1Q03419 316 aa7.37□□□□□ -1.23
SSL2YIL143C POM34Q12445 299 aa7.37□□□□□ -1.23
SSL2YIL143C SUA7P29055 345 aaPredicted RBP7.37□□□□□ -1.23
SSL2YIL143C DSK2P48510 373 aa7.37□□□□□ -1.23
SSL2YIL143C SRP14P38985 146 aa7.36□□□□□ -1.23
SSL2YIL143C DFG10P40526 253 aa7.36□□□□□ -1.23
SSL2YIL143C OST1P41543 476 aaKnown RBP7.36□□□□□ -1.23
SSL2YIL143C DYN2Q02647 92 aa7.36□□□□□ -1.23
SSL2YIL143C CWC27Q02770 301 aa7.36□□□□□ -1.23
SSL2YIL143C COQ11Q05892 277 aa7.36□□□□□ -1.23
SSL2YIL143C AME1P38313 324 aa7.36□□□□□ -1.23
SSL2YIL143C YJR015WP47090 510 aa7.36□□□□□ -1.23
SSL2YIL143C FLO9P39712 1322 aa7.36□□□□□ -1.23
SSL2YIL143C HAP3P13434 144 aa7.35□□□□□ -1.23
SSL2YIL143C CDC26P14724 124 aa7.35□□□□□ -1.23
SSL2YIL143C PRM5P40476 318 aa7.35□□□□□ -1.23
SSL2YIL143C YCR024C-BQ3E7Z8 88 aa7.35□□□□□ -1.23
SSL2YIL143C COX1P00401 534 aa7.35□□□□□ -1.23
SSL2YIL143C MIX23P38162 196 aa7.35□□□□□ -1.23
SSL2YIL143C YBR090CP38253 122 aa7.35□□□□□ -1.23
SSL2YIL143C DUG3P53871 357 aa7.35□□□□□ -1.23
SSL2YIL143C MCH1Q07376 486 aa7.35□□□□□ -1.23
SSL2YIL143C HRD1Q08109 551 aa7.35□□□□□ -1.23
SSL2YIL143C YOL024WQ08172 172 aa7.35□□□□□ -1.23
SSL2YIL143C TPT1Q12272 230 aaKnown RBP7.35□□□□□ -1.23
SSL2YIL143C YDL180WQ12301 547 aa7.35□□□□□ -1.23
SSL2YIL143C RNA15P25299 296 aaPredicted RBP7.34□□□□□ -1.23
SSL2YIL143C RPS2P25443 254 aaKnown RBP7.34□□□□□ -1.23
SSL2YIL143C SHH3Q04487 196 aa7.34□□□□□ -1.23
SSL2YIL143C PRP11Q07350 266 aaPredicted RBP7.34□□□□□ -1.23
SSL2YIL143C BOL1Q3E793 110 aa7.34□□□□□ -1.23
SSL2YIL143C CYB5P40312 120 aa7.34□□□□□ -1.23
SSL2YIL143C PRY1P47032 299 aa7.34□□□□□ -1.23
SSL2YIL143C YDR034W-BQ6Q5X2 51 aa7.34□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 52.8 ms