RNA–Protein interactions for RNA: YIL115C

NUP159, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP159, Length 4,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP159	YIL115C	YJR015W	P47090	510 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	EAF6	P47128	113 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	DAP1	Q12091	152 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	YPR015C	Q12531	247 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	YRF1-2	P40105	1681 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	UTP10	P42945	1769 aa	Known RBP	3.14	□□□□□ -1.91
NUP159	YIL115C	REC114	P32841	428 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	MRPL24	P36525	258 aa	Predicted RBP	3.14	□□□□□ -1.91
NUP159	YIL115C	MRPL27	P36526	146 aa	Predicted RBP	3.14	□□□□□ -1.91
NUP159	YIL115C	FRM2	P37261	193 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	SLM6	P38343	150 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	FMO1	P38866	432 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	HUA1	P40325	198 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	OST2	P46964	130 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	YPR098C	Q06089	161 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	TY1B-NL2	Q99337	1749 aa	Known RBP	3.14	□□□□□ -1.91
NUP159	YIL115C	MRPL20	P22354	195 aa	Predicted RBP	3.14	□□□□□ -1.91
NUP159	YIL115C	TIM12	P32830	109 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	GPX1	P36014	167 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
NUP159	YIL115C	YGR117C	P53270	476 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	MSO1	P53604	210 aa	Known RBP	3.14	□□□□□ -1.91
NUP159	YIL115C	YPQ1	Q12010	308 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	YDR029W	Q12111	104 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	TAD3	Q9URQ3	322 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	RRP5	Q05022	1729 aa	Known RBP	3.14	□□□□□ -1.91
NUP159	YIL115C	COX9	P07255	59 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	YER181C	P40097	107 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	YNR064C	P53750	290 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	POP3	P53833	195 aa	Predicted RBP	3.14	□□□□□ -1.91
NUP159	YIL115C	SUR7	P54003	302 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	MRX11	Q03079	207 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	YMR007W	Q03675	126 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	YOR292C	Q08743	309 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	YPR071W	Q12346	211 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	ATG40	Q99325	256 aa		3.14	□□□□□ -1.91
NUP159	YIL115C	ACC1	Q00955	2233 aa	Known RBP	3.13	□□□□□ -1.91
NUP159	YIL115C	CCS1	P40202	249 aa	Known RBP	3.13	□□□□□ -1.91
NUP159	YIL115C	CYB5	P40312	120 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	YNR048W	P53740	393 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	YPL014W	Q02606	381 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	DPP1	Q05521	289 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	RFM1	Q12192	310 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	RPL23A	P0CX41	137 aa	Known RBP	3.13	□□□□□ -1.91
NUP159	YIL115C	RPL23B	P0CX42	137 aa	Known RBP	3.13	□□□□□ -1.91
NUP159	YIL115C	QCR9	P22289	66 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	HSP12	P22943	109 aa	Known RBP	3.13	□□□□□ -1.91
NUP159	YIL115C	FYV4	P38783	130 aa	Predicted RBP	3.13	□□□□□ -1.91
NUP159	YIL115C	GPI2	P46961	280 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	YIP1	P53039	248 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	YGL230C	P53074	147 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	MTC3	P53077	123 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	SLG1	P54867	378 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	PET191	Q02772	108 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	YMR082C	Q04276	118 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	SNT309	Q06091	175 aa	Predicted RBP	3.13	□□□□□ -1.91
NUP159	YIL115C	MIM1	Q08176	113 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	YOL029C	Q08187	201 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	MBF1	O14467	151 aa	Known RBP	3.13	□□□□□ -1.91
NUP159	YIL115C	YJU3	P28321	313 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	YOX1	P34161	385 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	MCH2	P36032	473 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	YIP5	P53108	310 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	MST27	P53176	234 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	NUP53	Q03790	475 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	SCW10	Q04951	389 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	YIL102C-A	Q2V2P5	75 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	YLR149C	Q99296	730 aa		3.13	□□□□□ -1.91
NUP159	YIL115C	HEM4	P06174	275 aa		3.12	□□□□□ -1.91
NUP159	YIL115C	HEM13	P11353	328 aa	Known RBP	3.12	□□□□□ -1.91
NUP159	YIL115C	CBS1	P14066	229 aa		3.12	□□□□□ -1.91
NUP159	YIL115C	LCL3	P53153	274 aa		3.12	□□□□□ -1.91
NUP159	YIL115C	POX1	P13711	748 aa		3.12	□□□□□ -1.91
NUP159	YIL115C	MAC1	P35192	417 aa		3.12	□□□□□ -1.91
NUP159	YIL115C	YKL070W	P36087	169 aa		3.12	□□□□□ -1.91
NUP159	YIL115C	DSE2	P38844	325 aa		3.12	□□□□□ -1.91
NUP159	YIL115C	YNL198C	P40166	100 aa		3.12	□□□□□ -1.91
NUP159	YIL115C	ERV1	P27882	189 aa		3.12	□□□□□ -1.91
NUP159	YIL115C	AIM11	P87275	137 aa		3.12	□□□□□ -1.91
NUP159	YIL115C	AYT1	Q12226	474 aa		3.12	□□□□□ -1.91
NUP159	YIL115C	YLR118C	Q12354	227 aa		3.12	□□□□□ -1.91
NUP159	YIL115C	IRS4	P36115	615 aa	Known RBP	3.12	□□□□□ -1.91
NUP159	YIL115C	YJL028W	P47062	111 aa		3.12	□□□□□ -1.91
NUP159	YIL115C	YJR115W	P47152	169 aa		3.12	□□□□□ -1.91
NUP159	YIL115C	RDL2	Q08742	149 aa	Known RBP	3.12	□□□□□ -1.91
NUP159	YIL115C	PFA4	Q12006	378 aa		3.12	□□□□□ -1.91
NUP159	YIL115C	TAO3	P40468	2376 aa		3.11	□□□□□ -1.91
NUP159	YIL115C	SEC11	P15367	167 aa		3.11	□□□□□ -1.91
NUP159	YIL115C	CUP9	P41817	306 aa		3.11	□□□□□ -1.91
NUP159	YIL115C	CAX4	P53223	239 aa		3.11	□□□□□ -1.91
NUP159	YIL115C	YDR102C	Q03864	110 aa		3.11	□□□□□ -1.91
NUP159	YIL115C	GPI19	Q04082	140 aa		3.11	□□□□□ -1.91
NUP159	YIL115C	IRC13	Q08630	104 aa		3.11	□□□□□ -1.91
NUP159	YIL115C	YOR376W	Q08900	122 aa		3.11	□□□□□ -1.91
NUP159	YIL115C	MRPS5	P33759	307 aa		3.11	□□□□□ -1.91
NUP159	YIL115C	WSC4	P38739	605 aa		3.11	□□□□□ -1.91
NUP159	YIL115C	SHR5	P41912	237 aa		3.11	□□□□□ -1.91
NUP159	YIL115C	ATP23	P53722	227 aa		3.11	□□□□□ -1.91
NUP159	YIL115C	SEN1	Q00416	2231 aa	Known RBP	3.11	□□□□□ -1.91
NUP159	YIL115C	CHO1	P08456	276 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms