RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeastyeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APQ12YIL040W FMP27Q06179 2628 aa-0.64□□□□□ -2.51
APQ12YIL040W RHO1P06780 209 aaKnown RBP-0.64□□□□□ -2.51
APQ12YIL040W MER1P16523 270 aa-0.64□□□□□ -2.51
APQ12YIL040W TAF14P35189 244 aa-0.64□□□□□ -2.51
APQ12YIL040W RFC2P40348 353 aa-0.64□□□□□ -2.51
APQ12YIL040W YLR283WQ05867 314 aa-0.64□□□□□ -2.51
APQ12YIL040W HRD1Q08109 551 aa-0.64□□□□□ -2.51
APQ12YIL040W YDR157WA0A023PZE8 133 aa-0.65□□□□□ -2.51
APQ12YIL040W RPL28P02406 149 aaKnown RBP-0.65□□□□□ -2.51
APQ12YIL040W STE18P18852 110 aa-0.65□□□□□ -2.51
APQ12YIL040W APS3P47064 194 aa-0.65□□□□□ -2.51
APQ12YIL040W GPI17Q04080 534 aa-0.65□□□□□ -2.51
APQ12YIL040W ATG41Q12048 136 aa-0.65□□□□□ -2.51
APQ12YIL040W DAS2Q12084 232 aa-0.65□□□□□ -2.51
APQ12YIL040W YML100W-AQ8TGT0 57 aa-0.65□□□□□ -2.51
APQ12YIL040W URA2P07259 2214 aaKnown RBP-0.66□□□□□ -2.51
APQ12YIL040W MATALPHA1P0CY06 175 aa-0.66□□□□□ -2.52
APQ12YIL040W HMLALPHA1P0CY07 175 aa-0.66□□□□□ -2.52
APQ12YIL040W DDR48P18899 430 aaKnown RBP-0.66□□□□□ -2.52
APQ12YIL040W YMR31P19955 123 aa-0.66□□□□□ -2.52
APQ12YIL040W RPL24BP24000 155 aaKnown RBP-0.66□□□□□ -2.52
APQ12YIL040W NTG1P31378 399 aa-0.66□□□□□ -2.52
APQ12YIL040W YBR027CP38220 110 aa-0.66□□□□□ -2.52
APQ12YIL040W TRM5P38793 499 aa-0.66□□□□□ -2.52
APQ12YIL040W FMC1P40491 155 aa-0.66□□□□□ -2.52
APQ12YIL040W IRC18P47056 224 aa-0.66□□□□□ -2.52
APQ12YIL040W ADO1P47143 340 aaKnown RBP-0.66□□□□□ -2.52
APQ12YIL040W RNH1Q04740 348 aa-0.66□□□□□ -2.52
APQ12YIL040W VAM10Q08474 114 aa-0.66□□□□□ -2.52
APQ12YIL040W MDM32Q12171 622 aa-0.66□□□□□ -2.52
APQ12YIL040W ATP20Q12233 115 aa-0.66□□□□□ -2.52
APQ12YIL040W MBF1O14467 151 aaKnown RBP-0.67□□□□□ -2.52
APQ12YIL040W YRA2P36036 203 aaKnown RBP RIP-Chip data-0.67□□□□□ -2.52not detected
APQ12YIL040W RRT1P38192 103 aa-0.67□□□□□ -2.52
APQ12YIL040W YFL019CP43576 117 aa-0.67□□□□□ -2.52
APQ12YIL040W YMR315WQ04869 349 aaKnown RBP-0.67□□□□□ -2.52
APQ12YIL040W YMR321CQ04898 105 aa-0.67□□□□□ -2.52
APQ12YIL040W FUS2Q05670 677 aa-0.67□□□□□ -2.52
APQ12YIL040W YLR036CQ07986 203 aa-0.67□□□□□ -2.52
APQ12YIL040W THP2O13539 261 aaKnown RBP-0.68□□□□□ -2.52
APQ12YIL040W VMA6P32366 345 aaKnown RBP-0.68□□□□□ -2.52
APQ12YIL040W MIC12P38341 106 aa-0.68□□□□□ -2.52
APQ12YIL040W MVB12P42939 101 aa-0.68□□□□□ -2.52
APQ12YIL040W TDA4P47153 279 aa-0.68□□□□□ -2.52
APQ12YIL040W FMN1Q03778 218 aa-0.68□□□□□ -2.52
APQ12YIL040W YOR381W-AQ3E804 55 aa-0.68□□□□□ -2.52
APQ12YIL040W YLR422WQ06409 1932 aa-0.68□□□□□ -2.52
APQ12YIL040W YCR016WP25617 290 aaKnown RBP-0.69□□□□□ -2.52
APQ12YIL040W ATG8P38182 117 aaRIP-Chip data-0.69□□□□□ -2.52not detected
APQ12YIL040W FMP23P38231 175 aa-0.69□□□□□ -2.52
APQ12YIL040W NSA2P40078 261 aaKnown RBP-0.69□□□□□ -2.52
APQ12YIL040W NRK1P53915 240 aa-0.69□□□□□ -2.52
APQ12YIL040W GRX5Q02784 150 aa-0.69□□□□□ -2.52
APQ12YIL040W RIM9Q04734 239 aa-0.69□□□□□ -2.52
APQ12YIL040W GCN1P33892 2672 aaKnown RBP-0.69□□□□□ -2.52
APQ12YIL040W TOR2P32600 2474 aaKnown RBP-0.7□□□□□ -2.52
APQ12YIL040W POL2P21951 2222 aaKnown RBP-0.7□□□□□ -2.52
APQ12YIL040W RPS24AP0CX31 135 aaKnown RBP-0.7□□□□□ -2.52
APQ12YIL040W RPS24BP0CX32 135 aaKnown RBP-0.7□□□□□ -2.52
APQ12YIL040W SPS18P32572 300 aa-0.7□□□□□ -2.52
APQ12YIL040W YCR087C-AP37263 153 aa-0.7□□□□□ -2.52
APQ12YIL040W RTC3P38804 111 aaPredicted RBP-0.7□□□□□ -2.52
APQ12YIL040W GLC8P41818 229 aa-0.7□□□□□ -2.52
APQ12YIL040W YLR031WQ07978 186 aa-0.7□□□□□ -2.52
APQ12YIL040W YKL183C-AQ3E765 70 aa-0.7□□□□□ -2.52
APQ12YIL040W RIB3Q99258 208 aa-0.7□□□□□ -2.52
APQ12YIL040W TAF2P23255 1407 aa-0.71□□□□□ -2.52
APQ12YIL040W MYO1P08964 1928 aa-0.71□□□□□ -2.52
APQ12YIL040W RIF1P29539 1916 aa-0.71□□□□□ -2.52
APQ12YIL040W YBR121C-AP0C5L4 52 aa-0.71□□□□□ -2.52
APQ12YIL040W GCY1P14065 312 aaKnown RBP RIP-Chip data-0.71□□□□□ -2.52not detected
APQ12YIL040W PHO13P19881 312 aa-0.71□□□□□ -2.52
APQ12YIL040W YUH1P35127 236 aa-0.71□□□□□ -2.52
APQ12YIL040W RFC4P40339 323 aaKnown RBP-0.71□□□□□ -2.52
APQ12YIL040W PET117Q02771 107 aa-0.71□□□□□ -2.52
APQ12YIL040W YDL157CQ12082 118 aa-0.71□□□□□ -2.52
APQ12YIL040W RUD3Q12234 484 aaKnown RBP-0.71□□□□□ -2.52
APQ12YIL040W UTP20P35194 2493 aaKnown RBP-0.71□□□□□ -2.52
APQ12YIL040W LAA1P39526 2014 aa-0.71□□□□□ -2.52
APQ12YIL040W TEL1P38110 2787 aa-0.71□□□□□ -2.52
APQ12YIL040W TOR1P35169 2470 aa-0.72□□□□□ -2.52
APQ12YIL040W RPS25BP0C0T4 108 aaKnown RBP-0.72□□□□□ -2.52
APQ12YIL040W MATALPHA2P0CY08 210 aa-0.72□□□□□ -2.52
APQ12YIL040W HMLALPHA2P0CY09 210 aa-0.72□□□□□ -2.52
APQ12YIL040W RTR1P40084 226 aaPredicted RBP-0.72□□□□□ -2.52
APQ12YIL040W YGR269WP40326 108 aa-0.72□□□□□ -2.52
APQ12YIL040W TMA22P47089 198 aaPredicted RBP-0.72□□□□□ -2.52
APQ12YIL040W SBH1P52870 82 aa-0.72□□□□□ -2.52
APQ12YIL040W YPR127WQ06494 345 aa-0.72□□□□□ -2.52
APQ12YIL040W YLR412C-AQ3E742 68 aa-0.72□□□□□ -2.52
APQ12YIL040W RPS25AQ3E792 108 aaPredicted RBP-0.72□□□□□ -2.52
APQ12YIL040W HUG1Q6Q5K6 68 aa-0.72□□□□□ -2.52
APQ12YIL040W FAS2P19097 1887 aaKnown RBP-0.72□□□□□ -2.52
APQ12YIL040W GSC2P40989 1895 aa-0.73□□□□□ -2.53
APQ12YIL040W CDC33P07260 213 aaKnown RBP-0.73□□□□□ -2.53
APQ12YIL040W SPT14P32363 452 aa-0.73□□□□□ -2.53
APQ12YIL040W PRP18P33411 251 aaPredicted RBP-0.73□□□□□ -2.53
APQ12YIL040W CAF4P36130 643 aa-0.73□□□□□ -2.53
APQ12YIL040W NSG1P38837 291 aa-0.73□□□□□ -2.53
APQ12YIL040W YRB1P41920 201 aaKnown RBP-0.73□□□□□ -2.53
Retrieved 100 of 5,963 RNA–protein pairs in 71.1 ms