RNA–Protein interactions for RNA: YHR152W

SPO12, Transcript of Nucleolar protein of unknown function, yeastyeast

Gene SPO12, Length 522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO12YHR152W UBR2Q07963 1872 aa2.78□□□□□ -1.96
SPO12YHR152W CMD1P06787 147 aaKnown RBP2.78□□□□□ -1.96
SPO12YHR152W RPL2AP0CX45 254 aaKnown RBP2.78□□□□□ -1.96
SPO12YHR152W RPL2BP0CX46 254 aaKnown RBP2.78□□□□□ -1.96
SPO12YHR152W GPA2P10823 449 aa2.78□□□□□ -1.96
SPO12YHR152W FES1P38260 290 aa2.78□□□□□ -1.96
SPO12YHR152W TTI2P47168 421 aa2.78□□□□□ -1.96
SPO12YHR152W PRP11Q07350 266 aaPredicted RBP2.78□□□□□ -1.96
SPO12YHR152W YPR013CQ12145 317 aa2.78□□□□□ -1.96
SPO12YHR152W ATP20Q12233 115 aa2.78□□□□□ -1.96
SPO12YHR152W YHL018WP38744 120 aaPredicted RBP2.77□□□□□ -1.97
SPO12YHR152W DAD4P69851 72 aa2.77□□□□□ -1.97
SPO12YHR152W HSK3P69852 69 aa2.77□□□□□ -1.97
SPO12YHR152W YHR007C-AQ07074 71 aa2.77□□□□□ -1.97
SPO12YHR152W YLR422WQ06409 1932 aa2.77□□□□□ -1.97
SPO12YHR152W MDM35O60200 86 aa2.76□□□□□ -1.97
SPO12YHR152W QCR8P08525 94 aa2.76□□□□□ -1.97
SPO12YHR152W YNL200CP40165 246 aaKnown RBP2.76□□□□□ -1.97
SPO12YHR152W SBH1P52870 82 aa2.76□□□□□ -1.97
SPO12YHR152W GAL83Q04739 417 aa2.76□□□□□ -1.97
SPO12YHR152W SMD2Q06217 110 aaKnown RBP2.76□□□□□ -1.97
SPO12YHR152W MPA43P53583 542 aaPredicted RBP2.75□□□□□ -1.97
SPO12YHR152W DAS2Q12084 232 aa2.75□□□□□ -1.97
SPO12YHR152W QCR6P00127 147 aa2.74□□□□□ -1.97
SPO12YHR152W STP22P25604 385 aa2.74□□□□□ -1.97
SPO12YHR152W CPR5P35176 225 aa2.74□□□□□ -1.97
SPO12YHR152W FYV4P38783 130 aaPredicted RBP2.74□□□□□ -1.97
SPO12YHR152W XPT1P47165 209 aa2.74□□□□□ -1.97
SPO12YHR152W THG1P53215 237 aaKnown RBP2.74□□□□□ -1.97
SPO12YHR152W YPR127WQ06494 345 aa2.74□□□□□ -1.97
SPO12YHR152W COX8P04039 78 aa2.73□□□□□ -1.97
SPO12YHR152W QCR2P07257 368 aa2.73□□□□□ -1.97
SPO12YHR152W FPR1P20081 114 aaKnown RBP2.73□□□□□ -1.97
SPO12YHR152W RRT1P38192 103 aa2.73□□□□□ -1.97
SPO12YHR152W ARC19P33204 171 aaKnown RBP2.72□□□□□ -1.97
SPO12YHR152W SFK1P35735 353 aa2.72□□□□□ -1.97
SPO12YHR152W CSH1P38287 376 aa2.72□□□□□ -1.97
SPO12YHR152W YLR053CQ12026 108 aa2.72□□□□□ -1.97
SPO12YHR152W AME1P38313 324 aa2.71□□□□□ -1.98
SPO12YHR152W FLX1P40464 311 aa2.71□□□□□ -1.98
SPO12YHR152W MZM1Q03429 123 aaPredicted RBP2.71□□□□□ -1.98
SPO12YHR152W FIT2Q08906 153 aa2.71□□□□□ -1.98
SPO12YHR152W YOR214CQ12282 236 aa2.71□□□□□ -1.98
SPO12YHR152W RDI1Q12434 202 aa2.71□□□□□ -1.98
SPO12YHR152W GSP2P32836 220 aaKnown RBP2.7□□□□□ -1.98
SPO12YHR152W TIM13P53299 105 aa2.7□□□□□ -1.98
SPO12YHR152W VPS28Q02767 242 aa2.7□□□□□ -1.98
SPO12YHR152W HSP30P25619 332 aa2.69□□□□□ -1.98
SPO12YHR152W NUF2P33895 451 aa2.69□□□□□ -1.98
SPO12YHR152W YAE1P47118 141 aaPredicted RBP2.69□□□□□ -1.98
SPO12YHR152W TMA20P89886 181 aaPredicted RBP2.69□□□□□ -1.98
SPO12YHR152W THI74Q04083 370 aa2.69□□□□□ -1.98
SPO12YHR152W YOR015WQ12169 119 aa2.69□□□□□ -1.98
SPO12YHR152W YNL146C-AQ3E7Z1 64 aa2.69□□□□□ -1.98
SPO12YHR152W MSB2P32334 1306 aa2.68□□□□□ -1.98
SPO12YHR152W YCR023CP25351 611 aa2.68□□□□□ -1.98
SPO12YHR152W YKR005CQ02203 525 aa2.68□□□□□ -1.98
SPO12YHR152W RCE1Q03530 315 aa2.68□□□□□ -1.98
SPO12YHR152W PST2Q12335 198 aaKnown RBP2.68□□□□□ -1.98
SPO12YHR152W HPA3P39979 161 aa2.67□□□□□ -1.98
SPO12YHR152W EDC3P39998 551 aaKnown RBP2.67□□□□□ -1.98
SPO12YHR152W PIR1Q03178 341 aa2.67□□□□□ -1.98
SPO12YHR152W HYR1P40581 163 aaKnown RBP2.66□□□□□ -1.98
SPO12YHR152W GLR1P41921 483 aaKnown RBP2.66□□□□□ -1.98
SPO12YHR152W YFH7P43591 353 aa2.66□□□□□ -1.98
SPO12YHR152W ALB1P47019 175 aaPredicted RBP2.66□□□□□ -1.98
SPO12YHR152W YGL101WP53144 215 aa2.66□□□□□ -1.98
SPO12YHR152W CWC27Q02770 301 aa2.66□□□□□ -1.98
SPO12YHR152W NSL1Q12143 216 aa2.66□□□□□ -1.98
SPO12YHR152W YOR381W-AQ3E804 55 aa2.66□□□□□ -1.98
SPO12YHR152W RIO2P40160 425 aaKnown RBP2.65□□□□□ -1.99
SPO12YHR152W YGL235WP53071 178 aa2.65□□□□□ -1.99
SPO12YHR152W GRX5Q02784 150 aa2.65□□□□□ -1.99
SPO12YHR152W MAK3Q03503 176 aa2.65□□□□□ -1.99
SPO12YHR152W RAD6P06104 172 aa2.64□□□□□ -1.99
SPO12YHR152W RPB7P34087 171 aa2.64□□□□□ -1.99
SPO12YHR152W UBC7Q02159 165 aa2.64□□□□□ -1.99
SPO12YHR152W DML1Q03652 475 aa2.64□□□□□ -1.99
SPO12YHR152W RRP17Q04031 235 aaPredicted RBP2.64□□□□□ -1.99
SPO12YHR152W UBC6P33296 250 aaPredicted RBP2.63□□□□□ -1.99
SPO12YHR152W DER1P38307 211 aa2.63□□□□□ -1.99
SPO12YHR152W YHL042WP38729 150 aa2.63□□□□□ -1.99
SPO12YHR152W NSE4P43124 402 aa2.63□□□□□ -1.99
SPO12YHR152W YMR252CQ04814 134 aa2.63□□□□□ -1.99
SPO12YHR152W UPS1Q05776 175 aa2.63□□□□□ -1.99
SPO12YHR152W YHP1Q04116 353 aa2.62□□□□□ -1.99
SPO12YHR152W RIM9Q04734 239 aa2.62□□□□□ -1.99
SPO12YHR152W ATG41Q12048 136 aa2.62□□□□□ -1.99
SPO12YHR152W RPS28BP0C0X0 67 aaKnown RBP2.61□□□□□ -1.99
SPO12YHR152W UBI4P0CG63 381 aaKnown RBP2.61□□□□□ -1.99
SPO12YHR152W MPM1P40364 252 aa2.61□□□□□ -1.99
SPO12YHR152W RPS28AQ3E7X9 67 aaPredicted RBP2.61□□□□□ -1.99
SPO12YHR152W TRM3Q07527 1436 aa2.6□□□□□ -1.99
SPO12YHR152W YRA2P36036 203 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
SPO12YHR152W ORM1P53224 222 aa2.6□□□□□ -1.99
SPO12YHR152W LSM3P57743 89 aaKnown RBP2.6□□□□□ -1.99
SPO12YHR152W YDR476CQ03362 224 aa2.6□□□□□ -1.99
SPO12YHR152W SYM1Q06563 197 aa2.6□□□□□ -1.99
SPO12YHR152W STF2P16965 84 aa2.59□□□□□ -1.99
SPO12YHR152W MAK31P23059 88 aa2.59□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms