RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W YMR310CQ04867 317 aaPredicted RBP2.05□□□□□ -2.08
SNX41YDR425W HRD1Q08109 551 aa2.05□□□□□ -2.08
SNX41YDR425W CSM4Q08955 156 aa2.05□□□□□ -2.08
SNX41YDR425W YDL157CQ12082 118 aa2.05□□□□□ -2.08
SNX41YDR425W VAM3Q12241 283 aa2.05□□□□□ -2.08
SNX41YDR425W SLO1Q3E784 85 aa2.05□□□□□ -2.08
SNX41YDR425W MBF1O14467 151 aaKnown RBP2.04□□□□□ -2.08
SNX41YDR425W TRP1P00912 224 aa2.04□□□□□ -2.08
SNX41YDR425W STE7P06784 515 aa2.04□□□□□ -2.08
SNX41YDR425W CPA1P07258 411 aaKnown RBP2.04□□□□□ -2.08
SNX41YDR425W PAU1P0CE88 120 aa2.04□□□□□ -2.08
SNX41YDR425W PAU14P0CE89 120 aa2.04□□□□□ -2.08
SNX41YDR425W PAU6P0CE90 120 aa2.04□□□□□ -2.08
SNX41YDR425W PAU18P0CE91 120 aa2.04□□□□□ -2.08
SNX41YDR425W PAU8P0CE92 120 aa2.04□□□□□ -2.08
SNX41YDR425W PAU11P0CE93 120 aa2.04□□□□□ -2.08
SNX41YDR425W URA5P13298 226 aaKnown RBP2.04□□□□□ -2.08
SNX41YDR425W ARF2P19146 181 aaKnown RBP2.04□□□□□ -2.08
SNX41YDR425W RPI1P23250 407 aaKnown RBP2.04□□□□□ -2.08
SNX41YDR425W YCR025CP25352 136 aa2.04□□□□□ -2.08
SNX41YDR425W ERG3P32353 365 aa2.04□□□□□ -2.08
SNX41YDR425W ARO4P32449 370 aaKnown RBP2.04□□□□□ -2.08
SNX41YDR425W KKQ8P36004 724 aa2.04□□□□□ -2.08
SNX41YDR425W LSM2P38203 95 aaKnown RBP2.04□□□□□ -2.08
SNX41YDR425W AME1P38313 324 aa2.04□□□□□ -2.08
SNX41YDR425W PAU13P38725 120 aa2.04□□□□□ -2.08
SNX41YDR425W DOG1P38774 246 aa2.04□□□□□ -2.08
SNX41YDR425W YPT35P38815 214 aaKnown RBP2.04□□□□□ -2.08
SNX41YDR425W YJL028WP47062 111 aa2.04□□□□□ -2.08
SNX41YDR425W MIC26P50087 233 aa2.04□□□□□ -2.08
SNX41YDR425W YGL235WP53071 178 aa2.04□□□□□ -2.08
SNX41YDR425W RPN14P53196 417 aa2.04□□□□□ -2.08
SNX41YDR425W YGR017WP53210 297 aa2.04□□□□□ -2.08
SNX41YDR425W LST7P53237 242 aa2.04□□□□□ -2.08
SNX41YDR425W DIA1P54005 336 aa2.04□□□□□ -2.08
SNX41YDR425W PAU10Q03050 120 aa2.04□□□□□ -2.08
SNX41YDR425W THI74Q04083 370 aa2.04□□□□□ -2.08
SNX41YDR425W YMR082CQ04276 118 aa2.04□□□□□ -2.08
SNX41YDR425W GIM5Q04493 163 aa2.04□□□□□ -2.08
SNX41YDR425W ADH6Q04894 360 aaKnown RBP2.04□□□□□ -2.08
SNX41YDR425W SNT309Q06091 175 aaPredicted RBP2.04□□□□□ -2.08
SNX41YDR425W PAU20Q08322 120 aa2.04□□□□□ -2.08
SNX41YDR425W FCY22Q12119 530 aa2.04□□□□□ -2.08
SNX41YDR425W YDL211CQ12121 372 aa2.04□□□□□ -2.08
SNX41YDR425W PAU9Q3E770 120 aa2.04□□□□□ -2.08
SNX41YDR425W COA2Q3E823 68 aa2.04□□□□□ -2.08
SNX41YDR425W DET1Q99288 334 aaKnown RBP2.04□□□□□ -2.08
SNX41YDR425W Q0144Q9ZZW2 109 aa2.04□□□□□ -2.08
SNX41YDR425W YLR422WQ06409 1932 aa2.04□□□□□ -2.08
SNX41YDR425W GSC2P40989 1895 aa2.03□□□□□ -2.08
SNX41YDR425W CYC3P06182 269 aa2.03□□□□□ -2.08
SNX41YDR425W SPO13P23624 291 aa2.03□□□□□ -2.08
SNX41YDR425W YGL010WP25338 174 aa2.03□□□□□ -2.08
SNX41YDR425W MDH3P32419 343 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
SNX41YDR425W RML2P32611 393 aa2.03□□□□□ -2.08
SNX41YDR425W MGM101P32787 269 aaKnown RBP2.03□□□□□ -2.08
SNX41YDR425W PAU16P35994 123 aa2.03□□□□□ -2.08
SNX41YDR425W UMP1P38293 148 aa2.03□□□□□ -2.08
SNX41YDR425W OM14P38325 134 aa2.03□□□□□ -2.08
SNX41YDR425W YHL044WP38727 235 aa2.03□□□□□ -2.08
SNX41YDR425W PFS1P38872 237 aa2.03□□□□□ -2.08
SNX41YDR425W YER134CP40081 178 aa2.03□□□□□ -2.08
SNX41YDR425W RPL13BP40212 199 aaKnown RBP2.03□□□□□ -2.08
SNX41YDR425W SMD3P43321 101 aaKnown RBP2.03□□□□□ -2.08
SNX41YDR425W TTI2P47168 421 aa2.03□□□□□ -2.08
SNX41YDR425W MRPL19P53875 158 aa2.03□□□□□ -2.08
SNX41YDR425W DAD3P69850 94 aa2.03□□□□□ -2.08
SNX41YDR425W YML096WQ04489 525 aa2.03□□□□□ -2.08
SNX41YDR425W RTN1Q04947 295 aaKnown RBP2.03□□□□□ -2.08
SNX41YDR425W YOL024WQ08172 172 aa2.03□□□□□ -2.08
SNX41YDR425W HRT1Q08273 121 aa2.03□□□□□ -2.08
SNX41YDR425W MCT1Q12283 360 aa2.03□□□□□ -2.08
SNX41YDR425W PRR2Q12310 699 aa2.03□□□□□ -2.08
SNX41YDR425W YDR262WQ12331 272 aa2.03□□□□□ -2.08
SNX41YDR425W HUT1Q12520 339 aa2.03□□□□□ -2.08
SNX41YDR425W RPL13AQ12690 199 aaPredicted RBP2.03□□□□□ -2.08
SNX41YDR425W MSB2P32334 1306 aa2.03□□□□□ -2.08
SNX41YDR425W FMP49A0A023PZB3 126 aa2.03□□□□□ -2.09
SNX41YDR425W AHT1P29589 182 aa2.03□□□□□ -2.09
SNX41YDR425W TIM12P32830 109 aa2.03□□□□□ -2.09
SNX41YDR425W YKL187CP34231 750 aa2.03□□□□□ -2.09
SNX41YDR425W YKL102CP34249 101 aa2.03□□□□□ -2.09
SNX41YDR425W FIG1P38224 298 aa2.03□□□□□ -2.09
SNX41YDR425W LOC1P43586 204 aaPredicted RBP2.03□□□□□ -2.09
SNX41YDR425W RPA43P46669 326 aa2.03□□□□□ -2.09
SNX41YDR425W RNH201P53942 307 aa2.03□□□□□ -2.09
SNX41YDR425W APS2Q00381 147 aa2.03□□□□□ -2.09
SNX41YDR425W RPL21AQ02753 160 aaKnown RBP2.03□□□□□ -2.09
SNX41YDR425W SEI1Q06058 285 aa2.03□□□□□ -2.09
SNX41YDR425W CNL1Q06333 122 aa2.03□□□□□ -2.09
SNX41YDR425W CTS2Q06350 511 aa2.03□□□□□ -2.09
SNX41YDR425W YPR147CQ06522 304 aaKnown RBP2.03□□□□□ -2.09
SNX41YDR425W FSF1Q12029 327 aaKnown RBP2.03□□□□□ -2.09
SNX41YDR425W YLR050CQ12155 161 aaKnown RBP2.03□□□□□ -2.09
SNX41YDR425W RPL21BQ12672 160 aaKnown RBP2.03□□□□□ -2.09
SNX41YDR425W SCS22Q6Q595 175 aa2.03□□□□□ -2.09
SNX41YDR425W UBA3Q99344 299 aa2.03□□□□□ -2.09
SNX41YDR425W LAA1P39526 2014 aa2.03□□□□□ -2.09
SNX41YDR425W ECM29P38737 1868 aa2.02□□□□□ -2.09
SNX41YDR425W PAI3P01094 68 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms