RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE9	YDR393W	GPA2	P10823	449 aa		0.94	□□□□□ -2.26
SHE9	YDR393W	RPO26	P20435	155 aa		0.94	□□□□□ -2.26
SHE9	YDR393W	FZF1	P32805	299 aa		0.94	□□□□□ -2.26
SHE9	YDR393W	RPT5	P33297	434 aa	Known RBP	0.94	□□□□□ -2.26
SHE9	YDR393W	CUE1	P38428	203 aa		0.94	□□□□□ -2.26
SHE9	YDR393W	YRB1	P41920	201 aa	Known RBP	0.94	□□□□□ -2.26
SHE9	YDR393W	APS3	P47064	194 aa		0.94	□□□□□ -2.26
SHE9	YDR393W	BOL2	P53082	120 aa		0.94	□□□□□ -2.26
SHE9	YDR393W	MET31	Q03081	177 aa		0.94	□□□□□ -2.26
SHE9	YDR393W	YDL180W	Q12301	547 aa		0.94	□□□□□ -2.26
SHE9	YDR393W	RRP36	Q12481	300 aa	Predicted RBP	0.94	□□□□□ -2.26
SHE9	YDR393W	YCL048W-A	Q2V2Q2	79 aa		0.94	□□□□□ -2.26
SHE9	YDR393W	YPL229W	Q99395	206 aa		0.94	□□□□□ -2.26
SHE9	YDR393W	QCR8	P08525	94 aa		0.93	□□□□□ -2.26
SHE9	YDR393W	RPL27B	P0C2H7	136 aa	Known RBP	0.93	□□□□□ -2.26
SHE9	YDR393W	YPR170W-B	P0C5R9	85 aa		0.93	□□□□□ -2.26
SHE9	YDR393W	MRPS28	P21771	286 aa		0.93	□□□□□ -2.26
SHE9	YDR393W	MRPL25	P23369	157 aa		0.93	□□□□□ -2.26
SHE9	YDR393W	CLG1	P35190	452 aa		0.93	□□□□□ -2.26
SHE9	YDR393W	TMA19	P35691	167 aa	Known RBP	0.93	□□□□□ -2.26
SHE9	YDR393W	VPS51	P36116	164 aa		0.93	□□□□□ -2.26
SHE9	YDR393W	AIM2	P39721	246 aa		0.93	□□□□□ -2.26
SHE9	YDR393W	RFC4	P40339	323 aa	Known RBP	0.93	□□□□□ -2.26
SHE9	YDR393W	GLR1	P41921	483 aa	Known RBP	0.93	□□□□□ -2.26
SHE9	YDR393W	MCM22	P47167	239 aa		0.93	□□□□□ -2.26
SHE9	YDR393W	AIF1	P52923	378 aa		0.93	□□□□□ -2.26
SHE9	YDR393W	YNL010W	P53981	241 aa	Known RBP	0.93	□□□□□ -2.26
SHE9	YDR393W	YDR249C	Q03787	373 aa		0.93	□□□□□ -2.26
SHE9	YDR393W	YLR173W	Q06247	608 aa		0.93	□□□□□ -2.26
SHE9	YDR393W	RRT8	Q08219	342 aa		0.93	□□□□□ -2.26
SHE9	YDR393W	MED4	Q12343	284 aa		0.93	□□□□□ -2.26
SHE9	YDR393W	ATG31	Q12421	196 aa		0.93	□□□□□ -2.26
SHE9	YDR393W	LSO2	Q3E772	92 aa	Known RBP	0.93	□□□□□ -2.26
SHE9	YDR393W	QCR6	P00127	147 aa		0.92	□□□□□ -2.26
SHE9	YDR393W	RPL22A	P05749	121 aa	Known RBP	0.92	□□□□□ -2.26
SHE9	YDR393W	MGT1	P26188	188 aa		0.92	□□□□□ -2.26
SHE9	YDR393W	AUA1	P32450	94 aa		0.92	□□□□□ -2.26
SHE9	YDR393W	SRB4	P32569	687 aa		0.92	□□□□□ -2.26
SHE9	YDR393W	NSG1	P38837	291 aa		0.92	□□□□□ -2.26
SHE9	YDR393W	SAY1	P53324	424 aa		0.92	□□□□□ -2.26
SHE9	YDR393W	DID2	P69771	204 aa		0.92	□□□□□ -2.26
SHE9	YDR393W	NCE101	Q02820	53 aa		0.92	□□□□□ -2.26
SHE9	YDR393W	RCE1	Q03530	315 aa		0.92	□□□□□ -2.26
SHE9	YDR393W	FMN1	Q03778	218 aa		0.92	□□□□□ -2.26
SHE9	YDR393W	CSN9	Q03981	162 aa		0.92	□□□□□ -2.26
SHE9	YDR393W	YMR030W-A	Q3E760	96 aa		0.92	□□□□□ -2.26
SHE9	YDR393W	YHR139C-A	O13536	103 aa		0.91	□□□□□ -2.26
SHE9	YDR393W	RPL39	P04650	51 aa		0.91	□□□□□ -2.26
SHE9	YDR393W	RHO1	P06780	209 aa	Known RBP	0.91	□□□□□ -2.26
SHE9	YDR393W	CMD1	P06787	147 aa	Known RBP	0.91	□□□□□ -2.26
SHE9	YDR393W	CBF1	P17106	351 aa		0.91	□□□□□ -2.26
SHE9	YDR393W	FIG1	P38224	298 aa		0.91	□□□□□ -2.26
SHE9	YDR393W	DOG2	P38773	246 aa		0.91	□□□□□ -2.26
SHE9	YDR393W	YER034W	P40022	185 aa	Known RBP	0.91	□□□□□ -2.26
SHE9	YDR393W	PEX17	P40155	199 aa		0.91	□□□□□ -2.26
SHE9	YDR393W	FMP32	P43557	207 aa		0.91	□□□□□ -2.26
SHE9	YDR393W	FIP1	P45976	327 aa		0.91	□□□□□ -2.26
SHE9	YDR393W	SIP18	P50263	79 aa		0.91	□□□□□ -2.26
SHE9	YDR393W	NSA1	P53136	463 aa	Predicted RBP	0.91	□□□□□ -2.26
SHE9	YDR393W	SNZ1	Q03148	297 aa		0.91	□□□□□ -2.26
SHE9	YDR393W	CDC123	Q05791	360 aa		0.91	□□□□□ -2.26
SHE9	YDR393W	FIT3	Q08907	204 aa		0.91	□□□□□ -2.26
SHE9	YDR393W	YPL162C	Q12042	273 aa		0.91	□□□□□ -2.26
SHE9	YDR393W	TIM9	O74700	87 aa		0.9	□□□□□ -2.27
SHE9	YDR393W	REP2	P03872	296 aa		0.9	□□□□□ -2.27
SHE9	YDR393W	SPT3	P06844	337 aa		0.9	□□□□□ -2.27
SHE9	YDR393W	RPB4	P20433	221 aa	Predicted RBP	0.9	□□□□□ -2.27
SHE9	YDR393W	APA2	P22108	325 aa		0.9	□□□□□ -2.27
SHE9	YDR393W	ATG22	P25568	528 aa		0.9	□□□□□ -2.27
SHE9	YDR393W	SSO1	P32867	290 aa		0.9	□□□□□ -2.27
SHE9	YDR393W	VPS21	P36017	210 aa	Known RBP	0.9	□□□□□ -2.27
SHE9	YDR393W	IRC22	P40006	225 aa		0.9	□□□□□ -2.27
SHE9	YDR393W	FMC1	P40491	155 aa		0.9	□□□□□ -2.27
SHE9	YDR393W	YRB2	P40517	327 aa		0.9	□□□□□ -2.27
SHE9	YDR393W	YNL140C	P53910	189 aa		0.9	□□□□□ -2.27
SHE9	YDR393W	SWP1	Q02795	286 aa		0.9	□□□□□ -2.27
SHE9	YDR393W	NHP10	Q03435	203 aa		0.9	□□□□□ -2.27
SHE9	YDR393W	ANT1	Q06497	328 aa		0.9	□□□□□ -2.27
SHE9	YDR393W	PRP11	Q07350	266 aa	Predicted RBP	0.9	□□□□□ -2.27
SHE9	YDR393W	CDC10	P25342	322 aa	Known RBP	0.89	□□□□□ -2.27
SHE9	YDR393W	MRPL28	P36527	147 aa		0.89	□□□□□ -2.27
SHE9	YDR393W	POP4	P38336	279 aa		0.89	□□□□□ -2.27
SHE9	YDR393W	TCD1	P38756	429 aa		0.89	□□□□□ -2.27
SHE9	YDR393W	GAT4	P40569	121 aa		0.89	□□□□□ -2.27
SHE9	YDR393W	RPS12	P48589	143 aa	Known RBP	0.89	□□□□□ -2.27
SHE9	YDR393W	EFM5	P53200	248 aa	Known RBP	0.89	□□□□□ -2.27
SHE9	YDR393W	YNR064C	P53750	290 aa		0.89	□□□□□ -2.27
SHE9	YDR393W	YDR102C	Q03864	110 aa		0.89	□□□□□ -2.27
SHE9	YDR393W	LPP1	Q04396	274 aa		0.89	□□□□□ -2.27
SHE9	YDR393W	MCP1	Q12106	302 aa		0.89	□□□□□ -2.27
SHE9	YDR393W	RUD3	Q12234	484 aa	Known RBP	0.89	□□□□□ -2.27
SHE9	YDR393W	YJL197C-A	P0C5P0	93 aa		0.88	□□□□□ -2.27
SHE9	YDR393W	YLR156W	P0CE96	114 aa		0.88	□□□□□ -2.27
SHE9	YDR393W	YLR159W	P0CE97	114 aa		0.88	□□□□□ -2.27
SHE9	YDR393W	YLR161W	P0CE98	114 aa		0.88	□□□□□ -2.27
SHE9	YDR393W	YHR212W-A	P0CX91	67 aa		0.88	□□□□□ -2.27
SHE9	YDR393W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.88	□□□□□ -2.27	not detected
SHE9	YDR393W	KSS1	P14681	368 aa		0.88	□□□□□ -2.27
SHE9	YDR393W	TFC1	P32367	649 aa		0.88	□□□□□ -2.27
SHE9	YDR393W	UMP1	P38293	148 aa		0.88	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms