RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W CBF1P17106 351 aa0.4□□□□□ -2.35
BFR2YDR299W SPC25P40014 221 aa0.4□□□□□ -2.35
BFR2YDR299W GLR1P41921 483 aaKnown RBP0.4□□□□□ -2.35
BFR2YDR299W HOP2P53187 214 aa0.4□□□□□ -2.35
BFR2YDR299W YNL033WP53964 284 aa0.4□□□□□ -2.35
BFR2YDR299W MET31Q03081 177 aa0.4□□□□□ -2.35
BFR2YDR299W YMR099CQ03161 297 aaKnown RBP0.4□□□□□ -2.35
BFR2YDR299W YMR253CQ04835 414 aa0.4□□□□□ -2.35
BFR2YDR299W YPR127WQ06494 345 aa0.4□□□□□ -2.35
BFR2YDR299W DAS2Q12084 232 aa0.4□□□□□ -2.35
BFR2YDR299W COA3Q3E7B2 85 aa0.4□□□□□ -2.35
BFR2YDR299W YML100W-AQ8TGT0 57 aa0.4□□□□□ -2.35
BFR2YDR299W SLH1P53327 1967 aaKnown RBP0.4□□□□□ -2.35
BFR2YDR299W AQY2P0CD90 149 aa0.39□□□□□ -2.35
BFR2YDR299W YHR212W-AP0CX91 67 aa0.39□□□□□ -2.35
BFR2YDR299W NSP1P14907 823 aaKnown RBP0.39□□□□□ -2.35
BFR2YDR299W STF2P16965 84 aa0.39□□□□□ -2.35
BFR2YDR299W PRE1P22141 198 aaKnown RBP0.39□□□□□ -2.35
BFR2YDR299W HSP30P25619 332 aa0.39□□□□□ -2.35
BFR2YDR299W AHT1P29589 182 aa0.39□□□□□ -2.35
BFR2YDR299W UGX2P32772 223 aa0.39□□□□□ -2.35
BFR2YDR299W UBC6P33296 250 aaPredicted RBP0.39□□□□□ -2.35
BFR2YDR299W PAM17P36147 197 aa0.39□□□□□ -2.35
BFR2YDR299W HUA1P40325 198 aa0.39□□□□□ -2.35
BFR2YDR299W YFL019CP43576 117 aa0.39□□□□□ -2.35
BFR2YDR299W DCV1P43595 202 aa0.39□□□□□ -2.35
BFR2YDR299W APS3P47064 194 aa0.39□□□□□ -2.35
BFR2YDR299W RPL37AP49166 88 aaKnown RBP0.39□□□□□ -2.35
BFR2YDR299W NQM1P53228 333 aaPredicted RBP0.39□□□□□ -2.35
BFR2YDR299W VPS28Q02767 242 aa0.39□□□□□ -2.35
BFR2YDR299W PIR1Q03178 341 aa0.39□□□□□ -2.35
BFR2YDR299W DML1Q03652 475 aa0.39□□□□□ -2.35
BFR2YDR299W AIM34Q03673 198 aa0.39□□□□□ -2.35
BFR2YDR299W ARO80Q04052 950 aa0.39□□□□□ -2.35
BFR2YDR299W SHH4Q06236 168 aa0.39□□□□□ -2.35
BFR2YDR299W YOL014WQ08110 124 aa0.39□□□□□ -2.35
BFR2YDR299W BRX1Q08235 291 aaKnown RBP0.39□□□□□ -2.35
BFR2YDR299W TRX3P25372 127 aa0.38□□□□□ -2.35
BFR2YDR299W TAH1P25638 111 aaPredicted RBP0.38□□□□□ -2.35
BFR2YDR299W AHC2P25649 128 aa0.38□□□□□ -2.35
BFR2YDR299W ADE1P27616 306 aa0.38□□□□□ -2.35
BFR2YDR299W TRR1P29509 319 aaKnown RBP0.38□□□□□ -2.35
BFR2YDR299W ATP7P30902 174 aa0.38□□□□□ -2.35
BFR2YDR299W RFC2P40348 353 aa0.38□□□□□ -2.35
BFR2YDR299W MOB1P40484 314 aa0.38□□□□□ -2.35
BFR2YDR299W NSE4P43124 402 aa0.38□□□□□ -2.35
BFR2YDR299W YJR015WP47090 510 aa0.38□□□□□ -2.35
BFR2YDR299W YJR111CP47148 283 aaKnown RBP0.38□□□□□ -2.35
BFR2YDR299W RPL37BP51402 88 aaKnown RBP0.38□□□□□ -2.35
BFR2YDR299W YGL230CP53074 147 aa0.38□□□□□ -2.35
BFR2YDR299W YLR460CP54007 376 aa0.38□□□□□ -2.35
BFR2YDR299W YML079WQ03629 201 aa0.38□□□□□ -2.35
BFR2YDR299W YHP1Q04116 353 aa0.38□□□□□ -2.35
BFR2YDR299W RNH202Q05635 350 aa0.38□□□□□ -2.35
BFR2YDR299W NAT3Q06504 195 aa0.38□□□□□ -2.35
BFR2YDR299W NOC4Q06512 552 aaPredicted RBP0.38□□□□□ -2.35
BFR2YDR299W YPR203WQ08994 102 aa0.38□□□□□ -2.35
BFR2YDR299W YOR214CQ12282 236 aa0.38□□□□□ -2.35
BFR2YDR299W ARG80P07249 177 aa0.38□□□□□ -2.35
BFR2YDR299W SRP102P36057 244 aaPredicted RBP0.38□□□□□ -2.35
BFR2YDR299W RRT1P38192 103 aa0.38□□□□□ -2.35
BFR2YDR299W YAR064WP39563 99 aa0.38□□□□□ -2.35
BFR2YDR299W CCS1P40202 249 aaKnown RBP0.38□□□□□ -2.35
BFR2YDR299W PAC10P48363 199 aa0.38□□□□□ -2.35
BFR2YDR299W GIM3P53900 129 aa0.38□□□□□ -2.35
BFR2YDR299W TMA20P89886 181 aaPredicted RBP0.38□□□□□ -2.35
BFR2YDR299W YKR005CQ02203 525 aa0.38□□□□□ -2.35
BFR2YDR299W GPI17Q04080 534 aa0.38□□□□□ -2.35
BFR2YDR299W FIT1Q04433 528 aa0.38□□□□□ -2.35
BFR2YDR299W ELP6Q04868 273 aa0.38□□□□□ -2.35
BFR2YDR299W HRD1Q08109 551 aa0.38□□□□□ -2.35
BFR2YDR299W FIT2Q08906 153 aa0.38□□□□□ -2.35
BFR2YDR299W ATP20Q12233 115 aa0.38□□□□□ -2.35
BFR2YDR299W GIS3Q12418 502 aa0.38□□□□□ -2.35
BFR2YDR299W YOR381W-AQ3E804 55 aa0.38□□□□□ -2.35
BFR2YDR299W YCL012CQ8J0M4 134 aa0.38□□□□□ -2.35
BFR2YDR299W RAD6P06104 172 aa0.37□□□□□ -2.35
BFR2YDR299W RPS25BP0C0T4 108 aaKnown RBP0.37□□□□□ -2.35
BFR2YDR299W SEN2P16658 377 aa0.37□□□□□ -2.35
BFR2YDR299W YCL042WP25572 119 aa0.37□□□□□ -2.35
BFR2YDR299W YKL102CP34249 101 aa0.37□□□□□ -2.35
BFR2YDR299W VPS51P36116 164 aa0.37□□□□□ -2.35
BFR2YDR299W YKR070WP36151 352 aaKnown RBP0.37□□□□□ -2.35
BFR2YDR299W ETR1P38071 380 aa0.37□□□□□ -2.35
BFR2YDR299W EGD2P38879 174 aaKnown RBP0.37□□□□□ -2.35
BFR2YDR299W NVJ1P38881 321 aa0.37□□□□□ -2.35
BFR2YDR299W YEL008WP40001 126 aa0.37□□□□□ -2.35
BFR2YDR299W YGR269WP40326 108 aa0.37□□□□□ -2.35
BFR2YDR299W MPM1P40364 252 aa0.37□□□□□ -2.35
BFR2YDR299W GPI14P47088 403 aaKnown RBP0.37□□□□□ -2.35
BFR2YDR299W YGL235WP53071 178 aa0.37□□□□□ -2.35
BFR2YDR299W YNL140CP53910 189 aa0.37□□□□□ -2.35
BFR2YDR299W YDC1Q02896 317 aa0.37□□□□□ -2.35
BFR2YDR299W TMA23Q03525 211 aa0.37□□□□□ -2.35
BFR2YDR299W UPS1Q05776 175 aa0.37□□□□□ -2.35
BFR2YDR299W KEI1Q06346 221 aa0.37□□□□□ -2.35
BFR2YDR299W ATG41Q12048 136 aa0.37□□□□□ -2.35
BFR2YDR299W CCW12Q12127 133 aa0.37□□□□□ -2.35
BFR2YDR299W RPS25AQ3E792 108 aaPredicted RBP0.37□□□□□ -2.35
BFR2YDR299W TAR1Q8TGM6 124 aa0.37□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 151.1 ms