RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	MRPL16	P38064	232 aa		3.23	□□□□□ -1.89
RPO21	YDL140C	GRH1	Q04410	372 aa	Known RBP	3.23	□□□□□ -1.89
RPO21	YDL140C	ENV10	Q99382	181 aa		3.23	□□□□□ -1.89
RPO21	YDL140C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.23	□□□□□ -1.89	not detected
RPO21	YDL140C	ERV2	Q12284	196 aa		3.23	□□□□□ -1.89
RPO21	YDL140C	PRR2	Q12310	699 aa		3.23	□□□□□ -1.89
RPO21	YDL140C	BPH1	P25356	2167 aa		3.23	□□□□□ -1.89
RPO21	YDL140C	TOR2	P32600	2474 aa	Known RBP	3.23	□□□□□ -1.89
RPO21	YDL140C	CBF1	P17106	351 aa		3.22	□□□□□ -1.89
RPO21	YDL140C	SAS2	P40963	338 aa		3.22	□□□□□ -1.89
RPO21	YDL140C	RNY1	Q02933	434 aa	Known RBP	3.22	□□□□□ -1.89
RPO21	YDL140C	YHR139C-A	O13536	103 aa		3.22	□□□□□ -1.89
RPO21	YDL140C	ATG22	P25568	528 aa		3.22	□□□□□ -1.89
RPO21	YDL140C	AST1	P35183	429 aa		3.22	□□□□□ -1.89
RPO21	YDL140C	VHS2	P40463	436 aa		3.22	□□□□□ -1.89
RPO21	YDL140C	URM1	P40554	99 aa	Predicted RBP	3.22	□□□□□ -1.89
RPO21	YDL140C	TY1A-NL1	Q12391	440 aa	Known RBP	3.22	□□□□□ -1.89
RPO21	YDL140C	YER039C-A	P0CD97	72 aa		3.22	□□□□□ -1.89
RPO21	YDL140C	DOA4	P32571	926 aa		3.22	□□□□□ -1.89
RPO21	YDL140C	LHP1	P33399	275 aa	Known RBP	3.22	□□□□□ -1.89
RPO21	YDL140C	SPR6	Q01684	191 aa		3.22	□□□□□ -1.89
RPO21	YDL140C	YGL258W-A	Q3E740	77 aa		3.22	□□□□□ -1.89
RPO21	YDL140C	LSM8	P47093	109 aa	Known RBP	3.22	□□□□□ -1.89
RPO21	YDL140C	NIF3	P53081	288 aa		3.22	□□□□□ -1.89
RPO21	YDL140C	UTP15	Q04305	513 aa	Known RBP	3.22	□□□□□ -1.89
RPO21	YDL140C	COX5B	P00425	151 aa		3.21	□□□□□ -1.89
RPO21	YDL140C	COX7	P10174	60 aa		3.21	□□□□□ -1.89
RPO21	YDL140C	CDH1	P53197	566 aa		3.21	□□□□□ -1.89
RPO21	YDL140C	TIM21	P53220	239 aa		3.21	□□□□□ -1.89
RPO21	YDL140C	NAT3	Q06504	195 aa		3.21	□□□□□ -1.89
RPO21	YDL140C	SET6	Q12529	373 aa		3.21	□□□□□ -1.89
RPO21	YDL140C	YEL009C-A	A0A023PZF2	135 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	MRS1	P07266	363 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	RPS25B	P0C0T4	108 aa	Known RBP	3.21	□□□□□ -1.9
RPO21	YDL140C	PCL1	P24867	279 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	ANS1	P38832	159 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	CWC25	P53854	179 aa	Known RBP	3.21	□□□□□ -1.9
RPO21	YDL140C	DXO1	Q06349	442 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	POS5	Q06892	414 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	USV1	Q12132	391 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	RPS25A	Q3E792	108 aa	Predicted RBP	3.21	□□□□□ -1.9
RPO21	YDL140C	TY1B-H	O13535	1793 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	TY1B-DR5	P0C2I2	1755 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	TY1B-DR6	P0C2I3	1755 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	TY1B-LR2	P0C2I5	1755 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	3.21	□□□□□ -1.9
RPO21	YDL140C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	3.21	□□□□□ -1.9
RPO21	YDL140C	TY1B-PR2	P0C2J0	1756 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	3.21	□□□□□ -1.9
RPO21	YDL140C	TY1B-JR1	P47098	1755 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	TY1B-ML2	Q03434	1755 aa	Known RBP	3.21	□□□□□ -1.9
RPO21	YDL140C	TY1B-ER1	Q03612	1755 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	TY1B-ML1	Q04711	1755 aa	Known RBP	3.21	□□□□□ -1.9
RPO21	YDL140C	TY1B-GR2	Q12269	1755 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	TY1B-OL	Q12273	1755 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	TY1B-PL	Q12414	1755 aa	Known RBP	3.21	□□□□□ -1.9
RPO21	YDL140C	TY2B-B	Q12491	1770 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	MRPL6	P32904	214 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	ALP1	P38971	573 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	YER134C	P40081	178 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	ORM1	P53224	222 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	LCL1	Q02786	101 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	TY1A-MR1	Q04215	440 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	ATG41	Q12048	136 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	YDR029W	Q12111	104 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	TY1A-BL	Q12266	440 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	YPS3	Q12303	508 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	NTF2	P33331	125 aa	Known RBP	3.21	□□□□□ -1.9
RPO21	YDL140C	YJR120W	P47157	116 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	YMR253C	Q04835	414 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	VAM10	Q08474	114 aa		3.21	□□□□□ -1.9
RPO21	YDL140C	NCE102	Q12207	173 aa	RIP-Chip data	3.21	□□□□□ -1.9	not detected
RPO21	YDL140C	URB1	P34241	1764 aa	Known RBP	3.2	□□□□□ -1.9
RPO21	YDL140C	VPS63	O13549	108 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	QCR9	P22289	66 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	CBT1	P36038	271 aa	Predicted RBP	3.2	□□□□□ -1.9
RPO21	YDL140C	THG1	P53215	237 aa	Known RBP	3.2	□□□□□ -1.9
RPO21	YDL140C	YDR042C	Q03205	200 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	YMR082C	Q04276	118 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	GIM5	Q04493	163 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	YFL012W	P43580	148 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	MCH1	Q07376	486 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	SAG1	P20840	650 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	NHP2	P32495	156 aa	Predicted RBP	3.2	□□□□□ -1.9
RPO21	YDL140C	UTR5	P32630	166 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	CIN4	P39110	191 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	PNC1	P53184	216 aa	Known RBP	3.2	□□□□□ -1.9
RPO21	YDL140C	HHT1	P61830	136 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	DAL4	Q04895	635 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	RNH202	Q05635	350 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	SFH1	Q06168	426 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	MRPL31	P14063	131 aa	Predicted RBP	3.2	□□□□□ -1.9
RPO21	YDL140C	CPR4	P25334	318 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	SRB6	P32570	121 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	RMD6	P39975	231 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	YCH1	P42937	148 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	ARP3	P47117	449 aa	Known RBP	3.2	□□□□□ -1.9
RPO21	YDL140C	BSC1	Q12140	328 aa		3.2	□□□□□ -1.9
RPO21	YDL140C	RTC6	O14464	93 aa		3.19	□□□□□ -1.9
RPO21	YDL140C	RPL42A	P0CX27	106 aa	Known RBP	3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms