RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeastyeast

Gene SRD1, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRD1YCR018C YDL085C-AQ3E7B7 68 aaKnown RBP1.7□□□□□ -2.14
SRD1YCR018C ATG40Q99325 256 aa1.7□□□□□ -2.14
SRD1YCR018C ADE6P38972 1358 aaKnown RBP1.7□□□□□ -2.14
SRD1YCR018C FLO9P39712 1322 aa1.69□□□□□ -2.14
SRD1YCR018C PDR18P53756 1333 aa1.69□□□□□ -2.14
SRD1YCR018C YLR419WQ06698 1435 aaKnown RBP1.69□□□□□ -2.14
SRD1YCR018C OCH1P31755 480 aa1.69□□□□□ -2.14
SRD1YCR018C PAN3P36102 679 aaPredicted RBP1.69□□□□□ -2.14
SRD1YCR018C GAA1P39012 614 aa1.69□□□□□ -2.14
SRD1YCR018C AVT2P39981 480 aa1.69□□□□□ -2.14
SRD1YCR018C BAT2P47176 376 aaKnown RBP1.69□□□□□ -2.14
SRD1YCR018C ARO80Q04052 950 aa1.69□□□□□ -2.14
SRD1YCR018C GRX8Q05926 109 aa1.69□□□□□ -2.14
SRD1YCR018C ODC2Q99297 307 aa1.69□□□□□ -2.14
SRD1YCR018C TFC1P32367 649 aa1.68□□□□□ -2.14
SRD1YCR018C KDX1P36005 433 aa1.68□□□□□ -2.14
SRD1YCR018C SHE2P36068 246 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
SRD1YCR018C OPY1P38271 328 aa1.68□□□□□ -2.14
SRD1YCR018C YBR219CP38317 127 aa1.68□□□□□ -2.14
SRD1YCR018C TVP23P38962 199 aa1.68□□□□□ -2.14
SRD1YCR018C YEA4P40004 342 aa1.68□□□□□ -2.14
SRD1YCR018C SER2P42941 309 aa1.68□□□□□ -2.14
SRD1YCR018C ARO8P53090 500 aaKnown RBP1.68□□□□□ -2.14
SRD1YCR018C NRK1P53915 240 aa1.68□□□□□ -2.14
SRD1YCR018C NUP49Q02199 472 aa1.68□□□□□ -2.14
SRD1YCR018C YLR236CA0A023PZG4 107 aa1.67□□□□□ -2.14
SRD1YCR018C YER134CP40081 178 aa1.67□□□□□ -2.14
SRD1YCR018C ERJ5P43613 295 aaPredicted RBP1.67□□□□□ -2.14
SRD1YCR018C SKI6P46948 246 aaPredicted RBP1.67□□□□□ -2.14
SRD1YCR018C TMA22P47089 198 aaPredicted RBP1.67□□□□□ -2.14
SRD1YCR018C YJR111CP47148 283 aaKnown RBP1.67□□□□□ -2.14
SRD1YCR018C UBC12P52491 188 aa1.67□□□□□ -2.14
SRD1YCR018C SNO1Q03144 224 aa1.67□□□□□ -2.14
SRD1YCR018C DYN3Q04949 312 aa1.67□□□□□ -2.14
SRD1YCR018C YOL014WQ08110 124 aa1.67□□□□□ -2.14
SRD1YCR018C YML100W-AQ8TGT0 57 aa1.67□□□□□ -2.14
SRD1YCR018C RSF2P46974 1380 aa1.67□□□□□ -2.14
SRD1YCR018C POR1P04840 283 aaKnown RBP1.66□□□□□ -2.14
SRD1YCR018C EGD2P38879 174 aaKnown RBP1.66□□□□□ -2.14
SRD1YCR018C YMR099CQ03161 297 aaKnown RBP1.66□□□□□ -2.14
SRD1YCR018C YMR295CQ03559 197 aa1.66□□□□□ -2.14
SRD1YCR018C AIM34Q03673 198 aa1.66□□□□□ -2.14
SRD1YCR018C CUE4Q04201 117 aaPredicted RBP1.66□□□□□ -2.14
SRD1YCR018C ANT1Q06497 328 aa1.66□□□□□ -2.14
SRD1YCR018C YPR014CQ6B0W2 109 aa1.66□□□□□ -2.14
SRD1YCR018C RRP5Q05022 1729 aaKnown RBP1.66□□□□□ -2.14
SRD1YCR018C ROM2P51862 1356 aaKnown RBP1.65□□□□□ -2.15
SRD1YCR018C GCY1P14065 312 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
SRD1YCR018C TRR1P29509 319 aaKnown RBP1.65□□□□□ -2.15
SRD1YCR018C TMA19P35691 167 aaKnown RBP1.65□□□□□ -2.15
SRD1YCR018C ECM4P36156 370 aa1.65□□□□□ -2.15
SRD1YCR018C POG1P40473 351 aa1.65□□□□□ -2.15
SRD1YCR018C KNH1P50112 268 aa1.65□□□□□ -2.15
SRD1YCR018C TLG1Q03322 224 aa1.65□□□□□ -2.15
SRD1YCR018C RAD28Q12021 506 aa1.65□□□□□ -2.15
SRD1YCR018C YRF1-2P40105 1681 aa1.64□□□□□ -2.15
SRD1YCR018C RPO41P13433 1351 aaKnown RBP1.64□□□□□ -2.15
SRD1YCR018C YAR023CD6VPM8 179 aa1.64□□□□□ -2.15
SRD1YCR018C YOL162WP0CF19 215 aa1.64□□□□□ -2.15
SRD1YCR018C SRP14P38985 146 aa1.64□□□□□ -2.15
SRD1YCR018C MTW1P39731 289 aa1.64□□□□□ -2.15
SRD1YCR018C FMP32P43557 207 aa1.64□□□□□ -2.15
SRD1YCR018C TDA4P47153 279 aa1.64□□□□□ -2.15
SRD1YCR018C POP3P53833 195 aaPredicted RBP1.64□□□□□ -2.15
SRD1YCR018C BRX1Q08235 291 aaKnown RBP1.64□□□□□ -2.15
SRD1YCR018C GRE1Q08969 168 aa1.64□□□□□ -2.15
SRD1YCR018C NSP1P14907 823 aaKnown RBP1.63□□□□□ -2.15
SRD1YCR018C SPO13P23624 291 aa1.63□□□□□ -2.15
SRD1YCR018C SEC14P24280 304 aaKnown RBP1.63□□□□□ -2.15
SRD1YCR018C YKR045CP36138 183 aa1.63□□□□□ -2.15
SRD1YCR018C MPC3P53311 146 aa1.63□□□□□ -2.15
SRD1YCR018C YMR315WQ04869 349 aaKnown RBP1.63□□□□□ -2.15
SRD1YCR018C SHH4Q06236 168 aa1.63□□□□□ -2.15
SRD1YCR018C CSI2Q08054 341 aa1.63□□□□□ -2.15
SRD1YCR018C YOR342CQ12182 319 aa1.63□□□□□ -2.15
SRD1YCR018C SEC11P15367 167 aa1.62□□□□□ -2.15
SRD1YCR018C AHC2P25649 128 aa1.62□□□□□ -2.15
SRD1YCR018C MGT1P26188 188 aa1.62□□□□□ -2.15
SRD1YCR018C YIP3P53633 176 aa1.62□□□□□ -2.15
SRD1YCR018C PGA1P53896 198 aa1.62□□□□□ -2.15
SRD1YCR018C SHH3Q04487 196 aa1.62□□□□□ -2.15
SRD1YCR018C YLR162WQ06235 118 aa1.62□□□□□ -2.15
SRD1YCR018C YDL180WQ12301 547 aa1.62□□□□□ -2.15
SRD1YCR018C TY4B-HP0C2J7 1802 aa1.61□□□□□ -2.15
SRD1YCR018C TY4B-JP47024 1803 aa1.61□□□□□ -2.15
SRD1YCR018C VPS51P36116 164 aa1.61□□□□□ -2.15
SRD1YCR018C NSG1P38837 291 aa1.61□□□□□ -2.15
SRD1YCR018C YER135CP40082 130 aa1.61□□□□□ -2.15
SRD1YCR018C RPL13BP40212 199 aaKnown RBP1.61□□□□□ -2.15
SRD1YCR018C CUP9P41817 306 aa1.61□□□□□ -2.15
SRD1YCR018C VPS71Q03433 280 aa1.61□□□□□ -2.15
SRD1YCR018C YPR174CQ06616 221 aaPredicted RBP1.61□□□□□ -2.15
SRD1YCR018C MPD1Q12404 318 aaKnown RBP1.61□□□□□ -2.15
SRD1YCR018C PEX11Q12462 236 aa1.61□□□□□ -2.15
SRD1YCR018C RPL13AQ12690 199 aaPredicted RBP1.61□□□□□ -2.15
SRD1YCR018C URB1P34241 1764 aaKnown RBP1.61□□□□□ -2.15
SRD1YCR018C APC1P53886 1748 aa1.6□□□□□ -2.15
SRD1YCR018C QCR8P08525 94 aa1.6□□□□□ -2.15
SRD1YCR018C YGL010WP25338 174 aa1.6□□□□□ -2.15
SRD1YCR018C YKR041WP36134 250 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms