RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C MSA1Q08471 629 aa4.69□□□□□ -1.66
PDB1YBR221C YDL180WQ12301 547 aa4.69□□□□□ -1.66
PDB1YBR221C SAS5Q99314 248 aa4.69□□□□□ -1.66
PDB1YBR221C SPS2P08459 502 aa4.68□□□□□ -1.66
PDB1YBR221C TIR1P10863 254 aa4.68□□□□□ -1.66
PDB1YBR221C CCA1P21269 546 aa4.68□□□□□ -1.66
PDB1YBR221C SEC17P32602 292 aa4.68□□□□□ -1.66
PDB1YBR221C GPX1P36014 167 aa4.68□□□□□ -1.66
PDB1YBR221C RPE1P46969 238 aa4.68□□□□□ -1.66
PDB1YBR221C LCB3P47013 409 aa4.68□□□□□ -1.66
PDB1YBR221C YNL234WP53857 426 aa4.68□□□□□ -1.66
PDB1YBR221C YMR099CQ03161 297 aaKnown RBP4.68□□□□□ -1.66
PDB1YBR221C NAG1Q8TGN9 163 aa4.68□□□□□ -1.66
PDB1YBR221C YBR056W-AI2HB52 66 aa4.67□□□□□ -1.66
PDB1YBR221C YER039C-AP0CD97 72 aa4.67□□□□□ -1.66
PDB1YBR221C ATS1P31386 333 aa4.67□□□□□ -1.66
PDB1YBR221C OAR1P35731 278 aa4.67□□□□□ -1.66
PDB1YBR221C YBR063CP38083 404 aa4.67□□□□□ -1.66
PDB1YBR221C PTI1P39927 425 aaPredicted RBP4.67□□□□□ -1.66
PDB1YBR221C PHO23P50947 330 aa4.67□□□□□ -1.66
PDB1YBR221C TPC1P53257 314 aa4.67□□□□□ -1.66
PDB1YBR221C AAH1P53909 347 aa4.67□□□□□ -1.66
PDB1YBR221C APJ1P53940 528 aa4.67□□□□□ -1.66
PDB1YBR221C INP1Q03694 420 aa4.67□□□□□ -1.66
PDB1YBR221C SNX3Q08826 162 aaKnown RBP4.67□□□□□ -1.66
PDB1YBR221C KTI11Q3E840 82 aa4.67□□□□□ -1.66
PDB1YBR221C RPS18AP0CX55 146 aaKnown RBP4.66□□□□□ -1.66
PDB1YBR221C RPS18BP0CX56 146 aaPredicted RBP4.66□□□□□ -1.66
PDB1YBR221C ANB1P19211 157 aa4.66□□□□□ -1.66
PDB1YBR221C PRE1P22141 198 aaKnown RBP4.66□□□□□ -1.66
PDB1YBR221C URA10P30402 227 aa4.66□□□□□ -1.66
PDB1YBR221C PRE5P40302 234 aaKnown RBP4.66□□□□□ -1.66
PDB1YBR221C AVT7P40501 490 aa4.66□□□□□ -1.66
PDB1YBR221C CAT5P41735 233 aa4.66□□□□□ -1.66
PDB1YBR221C ARP3P47117 449 aaKnown RBP4.66□□□□□ -1.66
PDB1YBR221C ALG9P53868 555 aaKnown RBP4.66□□□□□ -1.66
PDB1YBR221C FMP41P53889 259 aaKnown RBP4.66□□□□□ -1.66
PDB1YBR221C DAD3P69850 94 aa4.66□□□□□ -1.66
PDB1YBR221C SPC3Q12133 184 aa4.66□□□□□ -1.66
PDB1YBR221C RDL1Q12305 139 aaKnown RBP4.66□□□□□ -1.66
PDB1YBR221C YLR122CQ12312 125 aa4.66□□□□□ -1.66
PDB1YBR221C SPT15P13393 240 aaKnown RBP4.65□□□□□ -1.67
PDB1YBR221C CKS1P20486 150 aaKnown RBP4.65□□□□□ -1.67
PDB1YBR221C SRP21P32342 167 aa4.65□□□□□ -1.67
PDB1YBR221C CSH1P38287 376 aa4.65□□□□□ -1.67
PDB1YBR221C RRT5P43607 289 aa4.65□□□□□ -1.67
PDB1YBR221C SFT1P43682 97 aa4.65□□□□□ -1.67
PDB1YBR221C CIS3P47001 227 aa4.65□□□□□ -1.67
PDB1YBR221C COS10P52924 374 aa4.65□□□□□ -1.67
PDB1YBR221C YGL088WP53151 121 aa4.65□□□□□ -1.67
PDB1YBR221C YOR292CQ08743 309 aa4.65□□□□□ -1.67
PDB1YBR221C YHR139C-AO13536 103 aa4.64□□□□□ -1.67
PDB1YBR221C Q0255P03881 472 aa4.64□□□□□ -1.67
PDB1YBR221C SIP2P34164 415 aaKnown RBP4.64□□□□□ -1.67
PDB1YBR221C TRS20P38334 175 aa4.64□□□□□ -1.67
PDB1YBR221C AST2P39945 430 aaKnown RBP4.64□□□□□ -1.67
PDB1YBR221C YEA6P39953 335 aa4.64□□□□□ -1.67
PDB1YBR221C GPI2P46961 280 aa4.64□□□□□ -1.67
PDB1YBR221C TTI2P47168 421 aa4.64□□□□□ -1.67
PDB1YBR221C YNL033WP53964 284 aa4.64□□□□□ -1.67
PDB1YBR221C YNL019CP53975 284 aa4.64□□□□□ -1.67
PDB1YBR221C RSM10Q03201 203 aa4.64□□□□□ -1.67
PDB1YBR221C TMA10Q06177 86 aa4.64□□□□□ -1.67
PDB1YBR221C NAT3Q06504 195 aa4.64□□□□□ -1.67
PDB1YBR221C TIR4Q12218 487 aaPredicted RBP4.64□□□□□ -1.67
PDB1YBR221C YBL008W-AQ3E821 79 aa4.64□□□□□ -1.67
PDB1YBR221C YLR462WO13556 202 aa4.63□□□□□ -1.67
PDB1YBR221C CYC7P00045 113 aa4.63□□□□□ -1.67
PDB1YBR221C SHB17P36136 271 aaKnown RBP4.63□□□□□ -1.67
PDB1YBR221C CHS7P38843 316 aa4.63□□□□□ -1.67
PDB1YBR221C YEL075CP39972 122 aa4.63□□□□□ -1.67
PDB1YBR221C EDC2P40023 145 aaPredicted RBP4.63□□□□□ -1.67
PDB1YBR221C YER189WP40104 122 aa4.63□□□□□ -1.67
PDB1YBR221C FIP1P45976 327 aa4.63□□□□□ -1.67
PDB1YBR221C YGL230CP53074 147 aa4.63□□□□□ -1.67
PDB1YBR221C VHS1Q03785 461 aa4.63□□□□□ -1.67
PDB1YBR221C MIM1Q08176 113 aa4.63□□□□□ -1.67
PDB1YBR221C OCA6Q12454 224 aa4.63□□□□□ -1.67
PDB1YBR221C YLR412C-AQ3E742 68 aa4.63□□□□□ -1.67
PDB1YBR221C RPL15AP05748 204 aaKnown RBP4.62□□□□□ -1.67
PDB1YBR221C RPL22AP05749 121 aaKnown RBP4.62□□□□□ -1.67
PDB1YBR221C FMP46P36141 133 aaKnown RBP4.62□□□□□ -1.67
PDB1YBR221C ETR1P38071 380 aa4.62□□□□□ -1.67
PDB1YBR221C YHR140WP38842 239 aa4.62□□□□□ -1.67
PDB1YBR221C TIM17P39515 158 aa4.62□□□□□ -1.67
PDB1YBR221C PRM5P40476 318 aa4.62□□□□□ -1.67
PDB1YBR221C YIL024CP40543 189 aa4.62□□□□□ -1.67
PDB1YBR221C SDS23P53172 527 aa4.62□□□□□ -1.67
PDB1YBR221C RSM27P53305 110 aa4.62□□□□□ -1.67
PDB1YBR221C RPL15BP54780 204 aaPredicted RBP4.62□□□□□ -1.67
PDB1YBR221C YKR005CQ02203 525 aa4.62□□□□□ -1.67
PDB1YBR221C PIR1Q03178 341 aa4.62□□□□□ -1.67
PDB1YBR221C RNH202Q05635 350 aa4.62□□□□□ -1.67
PDB1YBR221C YPS3Q12303 508 aa4.62□□□□□ -1.67
PDB1YBR221C DGK1Q12382 290 aa4.62□□□□□ -1.67
PDB1YBR221C GGC1P38988 300 aa4.61□□□□□ -1.67
PDB1YBR221C YER181CP40097 107 aa4.61□□□□□ -1.67
PDB1YBR221C SBH1P52870 82 aa4.61□□□□□ -1.67
PDB1YBR221C FSH2Q05015 223 aa4.61□□□□□ -1.67
PDB1YBR221C BSC1Q12140 328 aa4.61□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 175.7 ms