RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 FAM196AQ6ZSG2 479 aa10.02□□□□□ -0.8
CSMD1-217ENST00000602723 RIN3Q8TB24 985 aa10.02□□□□□ -0.8
CSMD1-217ENST00000602723 MED15Q96RN5 788 aa10.02□□□□□ -0.8
CSMD1-217ENST00000602723 SMAD5Q99717 465 aaKnown RBP10.02□□□□□ -0.8
CSMD1-217ENST00000602723 PSMD14O00487 310 aa10.02□□□□□ -0.8
CSMD1-217ENST00000602723 PDE5AO76074 875 aa10.02□□□□□ -0.8
CSMD1-217ENST00000602723 NUP107P57740 925 aa10.02□□□□□ -0.8
CSMD1-217ENST00000602723 DDI1Q8WTU0 396 aa10.02□□□□□ -0.8
CSMD1-217ENST00000602723 IRX2Q9BZI1 471 aaPredicted RBP10.02□□□□□ -0.8
CSMD1-217ENST00000602723 RNF146Q9NTX7 359 aa10.02□□□□□ -0.8
CSMD1-217ENST00000602723 CPDO75976 1380 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 TNPO2O14787 897 aaKnown RBP10.02□□□□□ -0.81
CSMD1-217ENST00000602723 ITGA8P53708 1063 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 TUFT1Q9NNX1 390 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 MYCP01106 439 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-217ENST00000602723 P4HBP07237 508 aaKnown RBP10.02□□□□□ -0.81
CSMD1-217ENST00000602723 CPA2P48052 419 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 LRRC8DQ7L1W4 858 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 OR2W6PQ8NHA6 318 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 MTERF3Q96E29 417 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 SMARCAL1Q9NZC9 954 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-217ENST00000602723 GYS1P13807 737 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 PCSK7Q16549 785 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 HAUS6Q7Z4H7 955 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 DCP1AQ9NPI6 582 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-217ENST00000602723 EVPLLA8MZ36 301 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 PWP1Q13610 501 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 NR1I3Q14994 352 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 ALX1Q15699 326 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 DALRD3Q5D0E6 543 aaKnown RBP10.02□□□□□ -0.81
CSMD1-217ENST00000602723 ADCK2Q7Z695 626 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 PRDM5Q9NQX1 630 aaPredicted RBP10.02□□□□□ -0.81
CSMD1-217ENST00000602723 PAK5Q9P286 719 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 DTNAQ9Y4J8 743 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 H2AFYO75367 372 aaKnown RBP10.02□□□□□ -0.81
CSMD1-217ENST00000602723 CRKP46108 304 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 LAMC2Q13753 1193 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 VEPH1Q14D04 833 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 SMTNL2Q2TAL5 461 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 GLMNQ92990 594 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 COQ7Q99807 217 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 SLC7A5P2Q9GIP4 190 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 SYBUQ9NX95 663 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 ZDHHC9Q9Y397 364 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 SSU72P8A0A1W2PR75 194 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 GRAP2O75791 330 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 SRGNP10124 158 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 GALCP54803 685 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 GEMIN4P57678 1058 aaKnown RBP10.02□□□□□ -0.81
CSMD1-217ENST00000602723 SNRNP35Q16560 246 aaKnown RBP10.02□□□□□ -0.81
CSMD1-217ENST00000602723 QRICH1Q2TAL8 776 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 EFL1Q7Z2Z2 1120 aaKnown RBP10.02□□□□□ -0.81
CSMD1-217ENST00000602723 SLC10A4Q96EP9 437 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 MTA3Q9BTC8 594 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 APOL5Q9BWW9 433 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 WDR35Q9P2L0 1181 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 MROH7-TTC4A0A0A0MT08 1334 aa10.02□□□□□ -0.81
CSMD1-217ENST00000602723 TDP2O95551 362 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 HNRNPH1P31943 449 aaKnown RBP10.01□□□□□ -0.81
CSMD1-217ENST00000602723 ITIH4Q14624 930 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 KBTBD12Q3ZCT8 623 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 ZCWPW2Q504Y3 356 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 RAVER2Q9HCJ3 691 aaKnown RBP10.01□□□□□ -0.81
CSMD1-217ENST00000602723 TRPC7Q9HCX4 862 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 HOXC10Q9NYD6 342 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 ABT1Q9ULW3 272 aaKnown RBP10.01□□□□□ -0.81
CSMD1-217ENST00000602723 ADGRA3Q8IWK6 1321 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 RGS4P49798 205 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 WDR72Q3MJ13 1102 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 SCFD2Q8WU76 684 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 CAAP1Q9H8G2 361 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 RIC8BQ9NVN3 520 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 PSMC3P17980 439 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 TWF1Q12792 350 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 SLC39A10Q9ULF5 831 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 SLC16A1P53985 500 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 P3H2Q8IVL5 708 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 HPS3Q969F9 1004 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 PABPC5Q96DU9 382 aaKnown RBP10.01□□□□□ -0.81
CSMD1-217ENST00000602723 SRPK1Q96SB4 655 aaKnown RBP10.01□□□□□ -0.81
CSMD1-217ENST00000602723 FAM153AQ9UHL3 310 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 PLEKHG2Q9H7P9 1386 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 UBXN8O00124 270 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 EYA4O95677 639 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 UCHL3P15374 230 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 ZBTB10Q96DT7 871 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 HES6Q96HZ4 224 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 ZIM3Q96PE6 472 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 CD248Q9HCU0 757 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 MAGEA13PA6NCF6 341 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 PGK2P07205 417 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 MAPRE1Q15691 268 aaKnown RBP10.01□□□□□ -0.81
CSMD1-217ENST00000602723 ARMCX4Q5H9R4 360 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 CLEC17AQ6ZS10 378 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 FAM71DQ8N9W8 422 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 VPS37AQ8NEZ2 397 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 EPS8L2Q9H6S3 715 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 APPL1Q9UKG1 709 aa10.01□□□□□ -0.81
CSMD1-217ENST00000602723 CACNA1CQ13936 2221 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms