RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 PDCLQ13371 301 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 WDR72Q3MJ13 1102 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 MTHFD1LQ6UB35 978 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 ANKS1BQ7Z6G8 1248 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 CPB2Q96IY4 423 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 TUT1Q9H6E5 874 aaKnown RBP20.9■□□□□ 0.94
MBD3-209ENST00000592012 R3HDM2Q9Y2K5 976 aaKnown RBP20.9■□□□□ 0.94
MBD3-209ENST00000592012 COL1A2P08123 1366 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 ZSWIM8A7E2V4 1837 aa20.89■□□□□ 0.94
MBD3-209ENST00000592012 ARF4P18085 180 aaPredicted RBP20.89■□□□□ 0.94
MBD3-209ENST00000592012 YWHAEP62258 255 aaKnown RBP20.89■□□□□ 0.94
MBD3-209ENST00000592012 KRT17Q04695 432 aa20.89■□□□□ 0.94
MBD3-209ENST00000592012 ZNF252P-AS1Q0IIN9 211 aa20.89■□□□□ 0.94
MBD3-209ENST00000592012 ZNF667Q5HYK9 610 aa20.89■□□□□ 0.94
MBD3-209ENST00000592012 PPP1R15BQ5SWA1 713 aa20.89■□□□□ 0.94
MBD3-209ENST00000592012 AGBL2Q5U5Z8 902 aa20.89■□□□□ 0.94
MBD3-209ENST00000592012 JADE1Q6IE81 842 aa20.89■□□□□ 0.94
MBD3-209ENST00000592012 RNF25Q96BH1 459 aaPredicted RBP20.89■□□□□ 0.94
MBD3-209ENST00000592012 OSBPL8Q9BZF1 889 aa20.89■□□□□ 0.94
MBD3-209ENST00000592012 FAM129AQ9BZQ8 928 aa20.89■□□□□ 0.94
MBD3-209ENST00000592012 SSR1P43307 286 aaKnown RBP20.89■□□□□ 0.93
MBD3-209ENST00000592012 RAP1GAPP47736 663 aa20.89■□□□□ 0.93
MBD3-209ENST00000592012 CDH8P55286 799 aa20.89■□□□□ 0.93
MBD3-209ENST00000592012 LACTBP83111 547 aaPredicted RBP20.89■□□□□ 0.93
MBD3-209ENST00000592012 DNAJC24Q6P3W2 148 aa20.89■□□□□ 0.93
MBD3-209ENST00000592012 GPR142Q7Z601 462 aa20.89■□□□□ 0.93
MBD3-209ENST00000592012 ANKRD23Q86SG2 305 aa20.89■□□□□ 0.93
MBD3-209ENST00000592012 ERICH1Q86X53 443 aa20.89■□□□□ 0.93
MBD3-209ENST00000592012 FAXDC2Q96IV6 333 aa20.89■□□□□ 0.93
MBD3-209ENST00000592012 MCEEQ96PE7 176 aa20.89■□□□□ 0.93
MBD3-209ENST00000592012 SEMA4AQ9H3S1 761 aa20.89■□□□□ 0.93
MBD3-209ENST00000592012 KAT6AQ92794 2004 aa20.89■□□□□ 0.93
MBD3-209ENST00000592012 TCF4P15884 667 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 SLC10A6Q3KNW5 377 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 KRT71Q3SY84 523 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 DPP9Q86TI2 863 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 ATL2Q8NHH9 583 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 PKNOX2Q96KN3 472 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 ASB7Q9H672 318 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 HOMER3Q9NSC5 361 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 WHRNQ9P202 907 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 FEZ2Q9UHY8 353 aaPredicted RBP20.88■□□□□ 0.93
MBD3-209ENST00000592012 SHBGP04278 402 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 ITGB3P05106 788 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 IVDP26440 423 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 GUCY1A3Q02108 690 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 OGDHQ02218 1023 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 IFFO1Q0D2I5 559 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 ATP13A4Q4VNC1 1196 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 MARCH8Q5T0T0 291 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 DENND1BQ6P3S1 775 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 SYDE1Q6ZW31 735 aaPredicted RBP20.88■□□□□ 0.93
MBD3-209ENST00000592012 SDCBP2Q9H190 292 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 LHX5Q9H2C1 402 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 BCCIPQ9P287 314 aaKnown RBP eCLIP20.88■□□□□ 0.93
MBD3-209ENST00000592012 CEP83Q9Y592 693 aa20.88■□□□□ 0.93
MBD3-209ENST00000592012 F8VP50 259 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 ZEB2O60315 1214 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 RARGP13631 454 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 SMPD1P17405 629 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 HPDP32754 393 aaPredicted RBP20.87■□□□□ 0.93
MBD3-209ENST00000592012 RAD23BP54727 409 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 CALCOCO2Q13137 446 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 GRB14Q14449 540 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 SLC29A2Q14542 456 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 CCNG2Q16589 344 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 DCUN1D2Q6PH85 259 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 C3orf20Q8ND61 904 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 MAML3Q96JK9 1138 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 GJC1P36383 396 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 PTK6Q13882 451 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 SLMAPQ14BN4 828 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 DUSP28Q4G0W2 176 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 DENND2CQ68D51 928 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 GRK7Q8WTQ7 553 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 NLRP7Q8WX94 980 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 LCMT1Q9UIC8 334 aa20.87■□□□□ 0.93
MBD3-209ENST00000592012 PAEPP09466 180 aa20.86■□□□□ 0.93
MBD3-209ENST00000592012 HOXD8P13378 290 aaPredicted RBP20.86■□□□□ 0.93
MBD3-209ENST00000592012 CD19P15391 556 aa20.86■□□□□ 0.93
MBD3-209ENST00000592012 ITIH2P19823 946 aa20.86■□□□□ 0.93
MBD3-209ENST00000592012 MDH1P40925 334 aaKnown RBP20.86■□□□□ 0.93
MBD3-209ENST00000592012 TAP1Q03518 808 aa20.86■□□□□ 0.93
MBD3-209ENST00000592012 NFX1Q12986 1120 aaKnown RBP20.86■□□□□ 0.93
MBD3-209ENST00000592012 CYP4A22Q5TCH4 519 aa20.86■□□□□ 0.93
MBD3-209ENST00000592012 LRRC38Q5VT99 294 aa20.86■□□□□ 0.93
MBD3-209ENST00000592012 RCOR2Q8IZ40 523 aa20.86■□□□□ 0.93
MBD3-209ENST00000592012 BCAS4Q8TDM0 211 aa20.86■□□□□ 0.93
MBD3-209ENST00000592012 VRTNQ9H8Y1 702 aa20.86■□□□□ 0.93
MBD3-209ENST00000592012 CYTH4Q9UIA0 394 aa20.86■□□□□ 0.93
MBD3-209ENST00000592012 NOVA2Q9UNW9 492 aaKnown RBP20.86■□□□□ 0.93
MBD3-209ENST00000592012 NEU2Q9Y3R4 380 aa20.86■□□□□ 0.93
MBD3-209ENST00000592012 GRIK4Q16099 956 aa20.86■□□□□ 0.93
MBD3-209ENST00000592012 PTPN20Q4JDL3 420 aa20.86■□□□□ 0.93
MBD3-209ENST00000592012 UBAP2Q5T6F2 1119 aaKnown RBP20.86■□□□□ 0.93
MBD3-209ENST00000592012 KIAA0319LQ8IZA0 1049 aa20.86■□□□□ 0.93
MBD3-209ENST00000592012 ARFGAP2Q8N6H7 521 aa20.86■□□□□ 0.93
MBD3-209ENST00000592012 SMYD3Q9H7B4 428 aa20.86■□□□□ 0.93
MBD3-209ENST00000592012 ASIC3Q9UHC3 531 aa20.86■□□□□ 0.93
MBD3-209ENST00000592012 A0A1B0GUA9 196 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms