RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 KIF2BQ8N4N8 673 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 LMO3Q8TAP4 145 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PCDHB18PQ96TA0 734 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 TEKT3Q9BXF9 490 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 L3MBTL1Q9Y468 752 aa12.28□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CCDC188H7C350 402 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SGPL1O95470 568 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ADRB2P07550 413 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 DLATP10515 647 aaKnown RBP12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 FERP16591 822 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 GAP43P17677 238 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 COMTP21964 271 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 DSG3P32926 999 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 GJC1P36383 396 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 IREB2P48200 963 aaKnown RBP12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 HSD17B4P51659 736 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 COPAP53621 1224 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 BFSP1Q12934 665 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 LAMB3Q13751 1172 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 KAZNQ674X7 775 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 ZDHHC24Q6UX98 284 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 CHMP6Q96FZ7 201 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 NACC1Q96RE7 527 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 SYT11Q9BT88 431 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 DMAC2Q9NW81 257 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 APEX2Q9UBZ4 518 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 PCSK1NQ9UHG2 260 aa12.27□□□□□ -0.44
CDK5RAP3-231ENST00000584063 RASSF9O75901 435 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CCNCP24863 283 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PEX3P56589 373 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CNTN2Q02246 1040 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PGM5Q15124 567 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 TKFCQ3LXA3 575 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ACCSLQ4AC99 568 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CATSPERGQ6ZRH7 1159 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CBWD2Q8IUF1 395 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SYCE1Q8N0S2 351 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 RASGEF1CQ8N431 466 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PRELID2Q8N945 189 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SLAIN1Q8ND83 568 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 B4GALNT2Q8NHY0 566 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 GLMNQ92990 594 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CDCA5Q96FF9 252 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 STK33Q9BYT3 514 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 KCNK9Q9NPC2 374 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ABCF3Q9NUQ8 709 aa12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ZNF214Q9UL59 606 aaPredicted RBP12.27□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SPDYE16A6NNV3 312 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 KIAA0391O15091 583 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 DHX15O43143 795 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 POLD2P49005 469 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CCDC137Q6PK04 289 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CAPN12Q6ZSI9 719 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 TAOK1Q7L7X3 1001 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 NANOGNBQ7Z5D8 188 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PPM1KQ8N3J5 372 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 DYDC1Q8WWB3 177 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SPIRE2Q8WWL2 714 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PBXIP1Q96AQ6 731 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 TEX13BQ9BXU2 312 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SLITRK6Q9H5Y7 841 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 FAM114A2Q9NRY5 505 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ZDHHC18Q9NUE0 388 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 INTS9Q9NV88 658 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 TRIM33Q9UPN9 1127 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SLC30A1Q9Y6M5 507 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 RPTORQ8N122 1335 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 EIF3DO15371 548 aaKnown RBP eCLIP12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CYP26A1O43174 497 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SPOPO43791 374 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 NR3C2P08235 984 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SMTNP53814 917 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PTENP60484 403 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CTAG1AP78358 180 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PPATQ06203 517 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 MTMR3Q13615 1198 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SEPT7Q16181 437 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 DUPD1Q68J44 220 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 B3GNT9Q6UX72 402 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SLC47A2Q86VL8 602 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 LINC00469Q8N7U9 141 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PRCCQ92733 491 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SEMA4DQ92854 862 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 CORO1BQ9BR76 489 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PDCD2LQ9BRP1 358 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 TACO1Q9BSH4 297 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 ADAM7Q9H2U9 754 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 VRTNQ9H8Y1 702 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 KIF9Q9HAQ2 790 aa12.26□□□□□ -0.45
CDK5RAP3-231ENST00000584063 RBBP6Q7Z6E9 1792 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 GOLGA6L10A0A0M3HER8 536 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 A6NNZ2 444 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 A8MUI8 341 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 BHMG1C9JSJ3 638 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 LSM1O15116 133 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 PRMT3O60678 531 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SKAP2O75563 359 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 GH1P01241 217 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 MTM1Q13496 603 aa12.25□□□□□ -0.45
CDK5RAP3-231ENST00000584063 SNCBQ16143 134 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms