RNA–Protein interactions for RNA: ENST00000577875.5

KPNB1-204, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-204ENST00000577875 NECTIN1Q15223 517 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 SF3A2Q15428 464 aaKnown RBP5.2□□□□□ -1.58
KPNB1-204ENST00000577875 GRIK4Q16099 956 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 CCDC6Q16204 474 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 USH1GQ495M9 461 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 SLC44A4Q53GD3 710 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 FAM102BQ5T8I3 360 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 ZBTB37Q5TC79 503 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 C19orf48Q6RUI8 117 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 STOX1Q6ZVD7 989 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 CEP68Q76N32 757 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 LONP2Q86WA8 852 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 TMEFF1Q8IYR6 380 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 RUFY2Q8WXA3 655 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 TNPO1Q92973 898 aaKnown RBP5.2□□□□□ -1.58
KPNB1-204ENST00000577875 PHKBQ93100 1093 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 PPP1R14AQ96A00 147 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 MFSD3Q96ES6 412 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 TMEM87BQ96K49 555 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 UBL7Q96S82 380 aaPredicted RBP5.2□□□□□ -1.58
KPNB1-204ENST00000577875 CDC6Q99741 560 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 ADAM2Q99965 735 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 DPH2Q9BQC3 489 aaPredicted RBP5.2□□□□□ -1.58
KPNB1-204ENST00000577875 PDCD2LQ9BRP1 358 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 RGS18Q9NS28 235 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 MAP3K20Q9NYL2 800 aaKnown RBP5.2□□□□□ -1.58
KPNB1-204ENST00000577875 ZSWIM5Q9P217 1185 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 COL20A1Q9P218 1284 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 TJP2Q9UDY2 1190 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 PCDHGA5Q9Y5G8 931 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 NUMBLQ9Y6R0 609 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 TICRRQ7Z2Z1 1910 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 SHROOM3Q8TF72 1996 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 ZMYM6O95789 1325 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 PCNX2A6NKB5 2137 aa5.2□□□□□ -1.58
KPNB1-204ENST00000577875 WDR81Q562E7 1941 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 DOPEY1Q5JWR5 2465 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 ASCC3Q8N3C0 2202 aaKnown RBP5.19□□□□□ -1.58
KPNB1-204ENST00000577875 RRN3P2A6NIE6 340 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 H0Y626 953 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 J3QKU1 62 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 INPPL1O15357 1258 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 RANBP6O60518 1105 aaKnown RBP5.19□□□□□ -1.58
KPNB1-204ENST00000577875 STAM2O75886 525 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 PAPSS2O95340 614 aaPredicted RBP5.19□□□□□ -1.58
KPNB1-204ENST00000577875 TRIM16O95361 564 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 PAPLNO95428 1278 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 FGFR1P11362 822 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 MYCLP1P12525 358 aaPredicted RBP5.19□□□□□ -1.58
KPNB1-204ENST00000577875 KLRC2P26717 231 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 ALDH7A1P49419 539 aaKnown RBP5.19□□□□□ -1.58
KPNB1-204ENST00000577875 GPC5P78333 572 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 TROAPQ12815 778 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 LONRF2Q1L5Z9 754 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 FOXD4L6Q3SYB3 417 aaPredicted RBP5.19□□□□□ -1.58
KPNB1-204ENST00000577875 BBS9Q3SYG4 887 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 TM4SF20Q53R12 229 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 RRP12Q5JTH9 1297 aaKnown RBP5.19□□□□□ -1.58
KPNB1-204ENST00000577875 FOXB2Q5VYV0 432 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 FOXD4L3Q6VB84 417 aaPredicted RBP5.19□□□□□ -1.58
KPNB1-204ENST00000577875 ZNF852Q6ZMS4 543 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 MFSD6Q6ZSS7 791 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 TPRG1Q6ZUI0 275 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 GET4Q7L5D6 327 aaPredicted RBP5.19□□□□□ -1.58
KPNB1-204ENST00000577875 ZNF605Q86T29 641 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 DDX53Q86TM3 631 aaKnown RBP5.19□□□□□ -1.58
KPNB1-204ENST00000577875 DMRTC2Q8IXT2 367 aaPredicted RBP5.19□□□□□ -1.58
KPNB1-204ENST00000577875 NME8Q8N427 588 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 SAMD3Q8N6K7 520 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 CHAC2Q8WUX2 184 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 SMG7Q92540 1137 aaKnown RBP5.19□□□□□ -1.58
KPNB1-204ENST00000577875 NINJ1Q92982 152 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 CHMP4CQ96CF2 233 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 CASD1Q96PB1 797 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 KIF2CQ99661 725 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 EDEM2Q9BV94 578 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 CELF4Q9BZC1 486 aaKnown RBP5.19□□□□□ -1.58
KPNB1-204ENST00000577875 VPS45Q9NRW7 570 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 TCP11L1Q9NUJ3 509 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 MRPL11Q9Y3B7 192 aaKnown RBP5.19□□□□□ -1.58
KPNB1-204ENST00000577875 MTF2Q9Y483 593 aaPredicted RBP5.19□□□□□ -1.58
KPNB1-204ENST00000577875 RAI2Q9Y5P3 530 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 URB1O60287 2271 aaKnown RBP5.19□□□□□ -1.58
KPNB1-204ENST00000577875 NEDD4P46934 1319 aa5.19□□□□□ -1.58
KPNB1-204ENST00000577875 CCDC195A0A1B0GUA6 201 aa5.18□□□□□ -1.58
KPNB1-204ENST00000577875 A0A1W2PQU0 124 aa5.18□□□□□ -1.58
KPNB1-204ENST00000577875 B4E1Z4 1266 aa5.18□□□□□ -1.58
KPNB1-204ENST00000577875 E7EWF7 191 aa5.18□□□□□ -1.58
KPNB1-204ENST00000577875 MAN2B1O00754 1011 aa5.18□□□□□ -1.58
KPNB1-204ENST00000577875 TMPRSS2O15393 492 aa5.18□□□□□ -1.58
KPNB1-204ENST00000577875 RPS6KA5O75582 802 aa5.18□□□□□ -1.58
KPNB1-204ENST00000577875 GLUD1P00367 558 aa5.18□□□□□ -1.58
KPNB1-204ENST00000577875 C1RP00736 705 aa5.18□□□□□ -1.58
KPNB1-204ENST00000577875 PDGFRBP09619 1106 aa5.18□□□□□ -1.58
KPNB1-204ENST00000577875 NAT2P11245 290 aa5.18□□□□□ -1.58
KPNB1-204ENST00000577875 TOP1P11387 765 aaKnown RBP5.18□□□□□ -1.58
KPNB1-204ENST00000577875 MYCLP12524 364 aaPredicted RBP5.18□□□□□ -1.58
KPNB1-204ENST00000577875 CCND2P30279 289 aa5.18□□□□□ -1.58
KPNB1-204ENST00000577875 CD68P34810 354 aaPredicted RBP5.18□□□□□ -1.58
KPNB1-204ENST00000577875 PBX3P40426 434 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms