RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ANKS1AQ92625 1134 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 SGCDQ92629 289 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 KISS1RQ969F8 398 aaPredicted RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 HPS3Q969F9 1004 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 RHOVQ96L33 236 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 RIPOR3Q96MK2 946 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 RUNDC3BQ96NL0 473 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 CLIC6Q96NY7 704 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 TAAR9Q96RI9 348 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 PPP1R16BQ96T49 567 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 TBCBQ99426 244 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 TUBA1CQ9BQE3 449 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 ZPBPQ9BS86 351 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 CRACR2AQ9BSW2 395 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 FUCA2Q9BTY2 467 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 DDX23Q9BUQ8 820 aaKnown RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 ACAT2Q9BWD1 397 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 TRIM5Q9C035 493 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 MTFR1LQ9H019 292 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 RNF38Q9H0F5 515 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 NSRP1Q9H0G5 558 aaKnown RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 ZSCAN16Q9H4T2 348 aaPredicted RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 KAT14Q9H8E8 782 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 LIN28AQ9H9Z2 209 aaKnown RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 CYP4F12Q9HCS2 524 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 DDX18Q9NVP1 670 aaKnown RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.8□□□□□ -1.8
SMG6-208ENST00000570874 GPRC5BQ9NZH0 403 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 IL1RAPL1Q9NZN1 696 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 PIM2Q9P1W9 311 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 HDAC6Q9UBN7 1215 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 SUCOQ9UBS9 1254 aaKnown RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 ZNF70Q9UC06 446 aaPredicted RBP3.8□□□□□ -1.8
SMG6-208ENST00000570874 CDC23Q9UJX2 597 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 RCOR1Q9UKL0 485 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 PCDHA7Q9UN72 937 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 EDARQ9UNE0 448 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 STX8Q9UNK0 236 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 BCS1LQ9Y276 419 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 CARD8Q9Y2G2 431 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 PCDHB6Q9Y5E3 794 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 PCDHGB5Q9Y5G0 923 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 PCDHGA10Q9Y5H3 936 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 KAT6AQ92794 2004 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 TRIP11Q15643 1979 aa3.8□□□□□ -1.8
SMG6-208ENST00000570874 A0A1B0GVL5 298 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 A0A1W2PPH5 198 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 A6NNZ2 444 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.79□□□□□ -1.8
SMG6-208ENST00000570874 K7ESF4 209 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 TULP2O00295 520 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 GRIN3BO60391 1043 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 MAN1A2O60476 641 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 SIN3BO75182 1162 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 SOAT2O75908 522 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 PRKD3O94806 890 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 FSBPO95073 299 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 EOMESO95936 686 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 MT-CO1P00395 513 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 GNRH1P01148 92 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 CSTBP04080 98 aaKnown RBP3.79□□□□□ -1.8
SMG6-208ENST00000570874 POLBP06746 335 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 HEXBP07686 556 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 POU2F2P09086 479 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 TPM1P09493 284 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 SLFN14P0C7P3 912 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 PDHBP11177 359 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 CYP2A6P11509 494 aaPredicted RBP3.79□□□□□ -1.8
SMG6-208ENST00000570874 PDGFRAP16234 1089 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 BPIP17213 487 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 ABCB4P21439 1286 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 GUCY2CP25092 1073 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 U2AF2P26368 475 aaKnown RBP eCLIP3.79□□□□□ -1.82e-6■■□□□ 13.9
SMG6-208ENST00000570874 L1CAMP32004 1257 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 ACTN2P35609 894 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 SLC16A2P36021 539 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 NOVP48745 357 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 RWDD2BP57060 319 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 SLC26A5P58743 744 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 SNAP25P60880 206 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 TGFB2P61812 414 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 TUBA1BP68363 451 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 COG7P83436 770 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 PPARDQ03181 441 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 PTK2Q05397 1052 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 ITIH3Q06033 890 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 RUNX1T1Q06455 604 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 SGCGQ13326 291 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 SMAD4Q13485 552 aaKnown RBP3.79□□□□□ -1.8
SMG6-208ENST00000570874 CUL4BQ13620 913 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 PDIA5Q14554 519 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 NAA25Q14CX7 972 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 PLCL1Q15111 1095 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 STK38Q15208 465 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 RCN1Q15293 331 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 PCBP1Q15365 356 aaKnown RBP eCLIP3.79□□□□□ -1.8
SMG6-208ENST00000570874 CCDC85BQ15834 202 aaPredicted RBP3.79□□□□□ -1.8
SMG6-208ENST00000570874 DBN1Q16643 649 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 ANO4Q32M45 955 aa3.79□□□□□ -1.8
SMG6-208ENST00000570874 MAJINQ3KP22 176 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms