RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 CPB1P15086 417 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 ARF4P18085 180 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-216ENST00000567071 WEE1P30291 646 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 CLK2P49760 499 aaKnown RBP10.65□□□□□ -0.7
CAPN3-216ENST00000567071 SEMG2Q02383 582 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 RPL6Q02878 288 aaKnown RBP10.65□□□□□ -0.7
CAPN3-216ENST00000567071 KRT32Q14532 448 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 MXD4Q14582 209 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-216ENST00000567071 RABEP1Q15276 862 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 PLEKHG6Q3KR16 790 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 CTXN3Q4LDR2 81 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 C6orf118Q5T5N4 469 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 PLA2G4FQ68DD2 849 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 SLC36A4Q6YBV0 504 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 FERMT3Q86UX7 667 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 MARCH9Q86YJ5 346 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 FMNL3Q8IVF7 1028 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 PGBD3Q8N328 593 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 TMTC2Q8N394 836 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 CPA6Q8N4T0 437 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 ENGASEQ8NFI3 743 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 CHFRQ96EP1 664 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 CEP170P1Q96L14 293 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 TCEANC2Q96MN5 208 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 ZDHHC5Q9C0B5 715 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 UNC45AQ9H3U1 944 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 ANKMY1Q9P2S6 941 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 SUSD2Q9UGT4 822 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 YIPF1Q9Y548 306 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 AK5Q9Y6K8 562 aa10.65□□□□□ -0.7
CAPN3-216ENST00000567071 COL5A1P20908 1838 aaPredicted RBP10.65□□□□□ -0.71
CAPN3-216ENST00000567071 A0A1W2PQD8 194 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 FAM149AA5PLN7 773 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 PLK4O00444 970 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 PTGESO14684 152 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 SYN3O14994 580 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 CBFA2T3O75081 653 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 GJB3O75712 270 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 PRAMEF12O95522 483 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 GNSP15586 552 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 U2AF2P26368 475 aaKnown RBP eCLIP10.64□□□□□ -0.71
CAPN3-216ENST00000567071 ANP32AP39687 249 aaKnown RBP10.64□□□□□ -0.71
CAPN3-216ENST00000567071 ALDH1A3P47895 512 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 PTENP60484 403 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 PSMC5P62195 406 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 TSGA10IPQ3SY00 556 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 ZNF280DQ6N043 979 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 BLOC1S2Q6QNY1 142 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 ZNF574Q6ZN55 896 aaPredicted RBP10.64□□□□□ -0.71
CAPN3-216ENST00000567071 ANO5Q75V66 913 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 TMC8Q8IU68 726 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 IGDCC4Q8TDY8 1250 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 FAM83CQ9BQN1 747 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 FAM124BQ9H5Z6 455 aaPredicted RBP10.64□□□□□ -0.71
CAPN3-216ENST00000567071 TASP1Q9H6P5 420 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 PRDM16Q9HAZ2 1276 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 FBRSL1Q9HCM7 1045 aaKnown RBP10.64□□□□□ -0.71
CAPN3-216ENST00000567071 HPS4Q9NQG7 708 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 ZMYM5Q9UJ78 669 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 FBXL5Q9UKA1 691 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 MMP17Q9ULZ9 603 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 SRPK3Q9UPE1 567 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 ASB3Q9Y575 518 aa10.64□□□□□ -0.71
CAPN3-216ENST00000567071 I3L4J1 428 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 ATXN1LP0C7T5 689 aaKnown RBP10.63□□□□□ -0.71
CAPN3-216ENST00000567071 RXRAP19793 462 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 PSMA5P28066 241 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 GABRR2P28476 465 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 HNF1BP35680 557 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 BRCC3P46736 316 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 NEK4P51957 841 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 ZNF33AQ06730 810 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 BFSP1Q12934 665 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 PDGFRLQ15198 375 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 CRY1Q16526 586 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 TMEM132AQ24JP5 1023 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 BROXQ5VW32 411 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 TRIM68Q6AZZ1 485 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 TMTC3Q6ZXV5 915 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 ITIH5Q86UX2 942 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 CDR2LQ86X02 465 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-216ENST00000567071 MB21D2Q8IYB1 491 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-216ENST00000567071 RGL4Q8IZJ4 473 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 USP33Q8TEY7 942 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 CRYGNQ8WXF5 182 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 POLR3CQ9BUI4 534 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-216ENST00000567071 LRRC2Q9BYS8 371 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 FAM117AQ9C073 453 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 DHX33Q9H6R0 707 aaKnown RBP10.63□□□□□ -0.71
CAPN3-216ENST00000567071 BMP2KQ9NSY1 1161 aaPredicted RBP10.63□□□□□ -0.71
CAPN3-216ENST00000567071 PAXBP1Q9Y5B6 917 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 CYP46A1Q9Y6A2 500 aa10.63□□□□□ -0.71
CAPN3-216ENST00000567071 TBX3O15119 743 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 MSH4O15457 936 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 TLX3O43711 291 aaPredicted RBP10.62□□□□□ -0.71
CAPN3-216ENST00000567071 RECQL4O94761 1208 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 STBD1O95210 358 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 CD2BP2O95400 341 aaKnown RBP10.62□□□□□ -0.71
CAPN3-216ENST00000567071 RPS6KB1P23443 525 aa10.62□□□□□ -0.71
CAPN3-216ENST00000567071 CDC25CP30307 473 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms