RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 PTPRJQ12913 1337 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 ZNF233A6NK53 670 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 M0QZQ0 153 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 PIRO00625 290 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 EIF3DO15371 548 aaKnown RBP eCLIP12.95□□□□□ -0.34
TPM1-216ENST00000558910 TGFB1I1O43294 461 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 NARSO43776 548 aaKnown RBP12.95□□□□□ -0.34
TPM1-216ENST00000558910 KLRC4O43908 158 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 GPR37L1O60883 481 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 RPN1P04843 607 aaKnown RBP12.95□□□□□ -0.34
TPM1-216ENST00000558910 ADRB2P07550 413 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 GJA1P17302 382 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 TNNI1P19237 187 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 NUCB2P80303 420 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 TWF1Q12792 350 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 PABPC1LQ4VXU2 614 aaKnown RBP12.95□□□□□ -0.34
TPM1-216ENST00000558910 SLC39A12Q504Y0 691 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 SLC8B1Q6J4K2 584 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 EPM2AIP1Q7L775 607 aaPredicted RBP12.95□□□□□ -0.34
TPM1-216ENST00000558910 HS2ST1Q7LGA3 356 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 METTL23Q86XA0 190 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 GPR65Q8IYL9 337 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 C1orf127Q8N9H9 656 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 ATAD1Q8NBU5 361 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 ZNF461Q8TAF7 563 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 CACTINQ8WUQ7 758 aaKnown RBP12.95□□□□□ -0.34
TPM1-216ENST00000558910 ELMO3Q96BJ8 720 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 MCRS1Q96EZ8 462 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 ANKRD36BP1Q96IX9 119 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.95□□□□□ -0.34
TPM1-216ENST00000558910 HPSEQ9Y251 543 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 DERAQ9Y315 318 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 MRPS23Q9Y3D9 190 aaKnown RBP12.95□□□□□ -0.34
TPM1-216ENST00000558910 C2CD2Q9Y426 696 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 DOCK6Q96HP0 2047 aa12.95□□□□□ -0.34
TPM1-216ENST00000558910 MYO10Q9HD67 2058 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 PDCD11Q14690 1871 aaKnown RBP12.94□□□□□ -0.34
TPM1-216ENST00000558910 PVALEFA0A1B0GWK0 134 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 ANO9A1A5B4 782 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 EXOC3O60645 756 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 ZNF202O95125 648 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 TNNC2P02585 160 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 RHOP08100 348 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 MYL4P12829 197 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 ACAT1P24752 427 aaKnown RBP12.94□□□□□ -0.34
TPM1-216ENST00000558910 GCGRP47871 477 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 CASP4P49662 377 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 DUSP4Q13115 394 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 MTMR3Q13615 1198 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 MRPL58Q14197 206 aaKnown RBP12.94□□□□□ -0.34
TPM1-216ENST00000558910 SNRNP35Q16560 246 aaKnown RBP12.94□□□□□ -0.34
TPM1-216ENST00000558910 SV2CQ496J9 727 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 KRBA2Q6ZNG9 492 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 ZDHHC14Q8IZN3 488 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 TTC9BQ8N6N2 239 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 KIAA0895Q8NCT3 520 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 OR10T2Q8NGX3 314 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 FAM200AQ8TCP9 573 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 TCEAL4Q96EI5 215 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 FNBP1Q96RU3 617 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 SEPT5Q99719 369 aaPredicted RBP12.94□□□□□ -0.34
TPM1-216ENST00000558910 KCNK12Q9HB15 430 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 FBXL21Q9UKT6 434 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 SORCS3Q9UPU3 1222 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 INSL5Q9Y5Q6 135 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 SNX9Q9Y5X1 595 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 TCHHQ07283 1943 aa12.94□□□□□ -0.34
TPM1-216ENST00000558910 PRR33A8MZF0 331 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 KPNA7A9QM74 516 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 HCRTO43612 131 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 TBC1D4O60343 1298 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 ABLIM3O94929 683 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 HNRNPA1P09651 372 aaKnown RBP eCLIP12.93□□□□□ -0.34
TPM1-216ENST00000558910 ATF2P15336 505 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 CEBPBP17676 345 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 PNOCQ13519 176 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 KNOP1Q1ED39 458 aaKnown RBP12.93□□□□□ -0.34
TPM1-216ENST00000558910 ISM2Q6H9L7 571 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 SCUBE3Q8IX30 993 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 SMYD4Q8IYR2 804 aaPredicted RBP12.93□□□□□ -0.34
TPM1-216ENST00000558910 THEM5Q8N1Q8 247 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 ELMOD1Q8N336 334 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 XXYLT1Q8NBI6 393 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 STKLD1Q8NE28 680 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 GPR152Q8TDT2 470 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 CCDC47Q96A33 483 aaKnown RBP12.93□□□□□ -0.34
TPM1-216ENST00000558910 ZNF560Q96MR9 790 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 KXD1Q9BQD3 176 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 RPP25Q9BUL9 199 aaKnown RBP12.93□□□□□ -0.34
TPM1-216ENST00000558910 IRX2Q9BZI1 471 aaPredicted RBP12.93□□□□□ -0.34
TPM1-216ENST00000558910 CRISPLD1Q9H336 500 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 MMRN2Q9H8L6 949 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 AFF4Q9UHB7 1163 aaKnown RBP12.93□□□□□ -0.34
TPM1-216ENST00000558910 CA14Q9ULX7 337 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 USTQ9Y2C2 406 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 YIPF1Q9Y548 306 aa12.93□□□□□ -0.34
TPM1-216ENST00000558910 A0A1W2PQ27 194 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 A0A1W2PQ64 194 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 A0A1W2PQD8 194 aa12.92□□□□□ -0.34
TPM1-216ENST00000558910 OR6C75A6NL08 312 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms