RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 TPCN2Q8NHX9 752 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 ERMNQ8TAM6 284 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 RAD54LQ92698 747 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 RMDN2Q96LZ7 410 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 MAGEB18Q96M61 343 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 IL1RAPL1Q9NZN1 696 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.16□□□□□ -0.94
DDB1-217ENST00000540166 SLC4A7Q9Y6M7 1214 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 WDR91A4D1P6 747 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 E9PMD0 336 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 ATP2A1O14983 1001 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 PEX11AO75192 247 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 SPAG7O75391 227 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 LCA5LO95447 670 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 GH1P01241 217 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 PGM1P36871 562 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 BEX3Q00994 111 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 PTK2Q05397 1052 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 FPGSQ05932 587 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 MAPK7Q13164 816 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 MTA1Q13330 715 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 GRB14Q14449 540 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 PDIA5Q14554 519 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 P3H1Q32P28 736 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 IQSEC1Q6DN90 963 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 TRMT10CQ7L0Y3 403 aaKnown RBP9.16□□□□□ -0.94
DDB1-217ENST00000540166 DNAAF5Q86Y56 855 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 GMCL1P1Q8NEA9 526 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 CEP63Q96MT8 703 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 SERPINB12Q96P63 405 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 SIKE1Q9BRV8 207 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 KATNAL1Q9BW62 490 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 PHACTR1Q9C0D0 580 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 THEGQ9P2T0 379 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 MAD2L2Q9UI95 211 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 GOLGB1Q14789 3259 aaKnown RBP9.16□□□□□ -0.94
DDB1-217ENST00000540166 CLTBP09497 229 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 RARGP13631 454 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 KCNA4P22459 653 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 PSMD7P51665 324 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 CNTN2Q02246 1040 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 DSG1Q02413 1049 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 THOC5Q13769 683 aaKnown RBP9.16□□□□□ -0.94
DDB1-217ENST00000540166 ARL10Q8N8L6 244 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 CKAP2Q8WWK9 683 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 GJA10Q969M2 543 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 GMCL1Q96IK5 515 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 LRMDAQ9H2I8 198 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 UBN1Q9NPG3 1134 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 BLOC1S6Q9UL45 172 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 PHTF1Q9UMS5 762 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 NID2Q14112 1375 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 SYNGAP1Q96PV0 1343 aa9.16□□□□□ -0.94
DDB1-217ENST00000540166 MYH2Q9UKX2 1941 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 KPNA6O60684 536 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 LPXNO60711 386 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 DUSP11O75319 330 aaKnown RBP9.15□□□□□ -0.94
DDB1-217ENST00000540166 GFPT2O94808 682 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 GCNT3O95395 438 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 ICAM1P05362 532 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 IRX4P78413 519 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 AUHQ13825 339 aaKnown RBP9.15□□□□□ -0.94
DDB1-217ENST00000540166 ARHGAP44Q17R89 818 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 FAM117BQ6P1L5 589 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 IZUMO2Q6UXV1 221 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 CAPN12Q6ZSI9 719 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 FNBP1Q96RU3 617 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 TRAF3IP3Q9Y228 551 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 IKBKGQ9Y6K9 419 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 EXOC1LA0A1B0GW35 172 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 MOXD2PA6NHM9 499 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 FAM47DPA6NHR8 397 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 ZSCAN9O15535 394 aaPredicted RBP9.15□□□□□ -0.94
DDB1-217ENST00000540166 DKC1O60832 514 aaKnown RBP eCLIP9.15□□□□□ -0.94
DDB1-217ENST00000540166 ATF2P15336 505 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 CCNG1P51959 295 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 ADARP55265 1226 aaKnown RBP9.15□□□□□ -0.94
DDB1-217ENST00000540166 JAG1P78504 1218 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 GRB10Q13322 594 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 KCNA10Q16322 511 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 LRRC36Q1X8D7 754 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 TRIM60Q495X7 471 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 TAF1BQ53T94 588 aaPredicted RBP9.15□□□□□ -0.94
DDB1-217ENST00000540166 EXOC3L1Q86VI1 746 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 VPS37BQ9H9H4 285 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 SLC38A10Q9HBR0 1119 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 VTA1Q9NP79 307 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 IL17RBQ9NRM6 502 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 NDUFA13Q9P0J0 144 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 DNM3Q9UQ16 869 aa9.15□□□□□ -0.94
DDB1-217ENST00000540166 CLIC2O15247 247 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 RIPK2O43353 540 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 CYTH3O43739 400 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 CALUO43852 315 aaPredicted RBP9.15□□□□□ -0.95
DDB1-217ENST00000540166 CDH16O75309 829 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 OATP04181 439 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 PLA2G4BP0C869 781 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 SERPINB6P35237 376 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 RGS19P49795 217 aa9.15□□□□□ -0.95
DDB1-217ENST00000540166 CCL23P55773 120 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms