RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 HACE1Q8IYU2 909 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 LRRC52Q8N7C0 313 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 FAM71BQ8TC56 605 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 KRT35Q92764 455 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 BTBD6Q96KE9 485 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 PKNOX2Q96KN3 472 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 HOMER3Q9NSC5 361 aa17.49■□□□□ 0.39
CXCL3-204ENST00000511669 BARX2Q9UMQ3 279 aaPredicted RBP17.49■□□□□ 0.39
CXCL3-204ENST00000511669 UBQLN1Q9UMX0 589 aaKnown RBP17.49■□□□□ 0.39
CXCL3-204ENST00000511669 PIN4Q9Y237 131 aaKnown RBP17.49■□□□□ 0.39
CXCL3-204ENST00000511669 PODXLO00592 558 aa17.48■□□□□ 0.39
CXCL3-204ENST00000511669 HSF2BPO75031 334 aa17.48■□□□□ 0.39
CXCL3-204ENST00000511669 CILPO75339 1184 aa17.48■□□□□ 0.39
CXCL3-204ENST00000511669 HMGCRP04035 888 aa17.48■□□□□ 0.39
CXCL3-204ENST00000511669 PNPLA4P41247 253 aa17.48■□□□□ 0.39
CXCL3-204ENST00000511669 BEX3Q00994 111 aa17.48■□□□□ 0.39
CXCL3-204ENST00000511669 PIGHQ14442 188 aaPredicted RBP17.48■□□□□ 0.39
CXCL3-204ENST00000511669 SGO2Q562F6 1265 aa17.48■□□□□ 0.39
CXCL3-204ENST00000511669 ALS2CLQ60I27 953 aa17.48■□□□□ 0.39
CXCL3-204ENST00000511669 RUFY4Q6ZNE9 571 aa17.48■□□□□ 0.39
CXCL3-204ENST00000511669 SLC13A5Q86YT5 568 aaPredicted RBP17.48■□□□□ 0.39
CXCL3-204ENST00000511669 C3orf20Q8ND61 904 aa17.48■□□□□ 0.39
CXCL3-204ENST00000511669 C1orf131Q8NDD1 294 aaKnown RBP17.48■□□□□ 0.39
CXCL3-204ENST00000511669 LRRC45Q96CN5 670 aa17.48■□□□□ 0.39
CXCL3-204ENST00000511669 ZNF560Q96MR9 790 aa17.48■□□□□ 0.39
CXCL3-204ENST00000511669 SYNCQ9H7C4 482 aa17.48■□□□□ 0.39
CXCL3-204ENST00000511669 CHORDC1Q9UHD1 332 aaPredicted RBP17.48■□□□□ 0.39
CXCL3-204ENST00000511669 HPCAL4Q9UM19 191 aa17.48■□□□□ 0.39
CXCL3-204ENST00000511669 TREHO43280 583 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 RARBP10826 455 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 CYBAP13498 195 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 FGFR4P22455 802 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 OAS2P29728 719 aaKnown RBP17.47■□□□□ 0.39
CXCL3-204ENST00000511669 HOXA11P31270 313 aaPredicted RBP17.47■□□□□ 0.39
CXCL3-204ENST00000511669 HOXC8P31273 242 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 FNTAP49354 379 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 AARSP49588 968 aaKnown RBP eCLIP17.47■□□□□ 0.39
CXCL3-204ENST00000511669 RAD23BP54727 409 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 INCA1Q0VD86 236 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 GNASQ5JWF2 1037 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 IPO4Q8TEX9 1081 aaKnown RBP17.47■□□□□ 0.39
CXCL3-204ENST00000511669 NT5C1AQ9BXI3 368 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 UBXN6Q9BZV1 441 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 SNTG2Q9NY99 539 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 CNTN3Q9P232 1028 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 PARP2Q9UGN5 583 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 AMACRQ9UHK6 382 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 FEZ2Q9UHY8 353 aaPredicted RBP17.47■□□□□ 0.39
CXCL3-204ENST00000511669 GOLGA6BA6NDN3 693 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 OPA1O60313 960 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 SSR1P43307 286 aaKnown RBP17.47■□□□□ 0.39
CXCL3-204ENST00000511669 NOGQ13253 232 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 CNGA2Q16280 664 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 MREGQ8N565 214 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 CASKIN2Q8WXE0 1202 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 MAGOHBQ96A72 148 aaKnown RBP17.47■□□□□ 0.39
CXCL3-204ENST00000511669 LENG1Q96BZ8 264 aaPredicted RBP17.47■□□□□ 0.39
CXCL3-204ENST00000511669 RBM41Q96IZ5 413 aaKnown RBP17.47■□□□□ 0.39
CXCL3-204ENST00000511669 FAM129AQ9BZQ8 928 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 UPF3AQ9H1J1 476 aaKnown RBP17.47■□□□□ 0.39
CXCL3-204ENST00000511669 SMYD3Q9H7B4 428 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 NFU1Q9UMS0 254 aa17.47■□□□□ 0.39
CXCL3-204ENST00000511669 SEPT4O43236 478 aa17.46■□□□□ 0.39
CXCL3-204ENST00000511669 MYBL2P10244 700 aa17.46■□□□□ 0.39
CXCL3-204ENST00000511669 PYGMP11217 842 aa17.46■□□□□ 0.39
CXCL3-204ENST00000511669 ITGA4P13612 1032 aa17.46■□□□□ 0.39
CXCL3-204ENST00000511669 DESP17661 470 aa17.46■□□□□ 0.39
CXCL3-204ENST00000511669 CARSP49589 748 aaKnown RBP17.46■□□□□ 0.39
CXCL3-204ENST00000511669 GSCP56915 257 aaPredicted RBP17.46■□□□□ 0.39
CXCL3-204ENST00000511669 LRRC38Q5VT99 294 aa17.46■□□□□ 0.39
CXCL3-204ENST00000511669 GSPT2Q8IYD1 628 aaKnown RBP17.46■□□□□ 0.39
CXCL3-204ENST00000511669 SLC4A11Q8NBS3 891 aa17.46■□□□□ 0.39
CXCL3-204ENST00000511669 CXorf38Q8TB03 319 aa17.46■□□□□ 0.39
CXCL3-204ENST00000511669 GRK7Q8WTQ7 553 aa17.46■□□□□ 0.39
CXCL3-204ENST00000511669 C18orf8Q96DM3 657 aa17.46■□□□□ 0.39
CXCL3-204ENST00000511669 HEXIM2Q96MH2 286 aaKnown RBP17.46■□□□□ 0.39
CXCL3-204ENST00000511669 CELF4Q9BZC1 486 aaKnown RBP17.46■□□□□ 0.39
CXCL3-204ENST00000511669 GPBP1L1Q9HC44 474 aaPredicted RBP17.46■□□□□ 0.39
CXCL3-204ENST00000511669 DDX56Q9NY93 547 aaKnown RBP17.46■□□□□ 0.39
CXCL3-204ENST00000511669 PCYOX1Q9UHG3 505 aa17.46■□□□□ 0.39
CXCL3-204ENST00000511669 CASP8AP2Q9UKL3 1982 aa17.45■□□□□ 0.38
CXCL3-204ENST00000511669 TMEM191CA6NGB0 347 aa17.45■□□□□ 0.38
CXCL3-204ENST00000511669 FSCN2O14926 492 aa17.45■□□□□ 0.38
CXCL3-204ENST00000511669 CAPN15O75808 1086 aa17.45■□□□□ 0.38
CXCL3-204ENST00000511669 CFHP08603 1231 aa17.45■□□□□ 0.38
CXCL3-204ENST00000511669 RAP1GAPP47736 663 aa17.45■□□□□ 0.38
CXCL3-204ENST00000511669 MARCKSL1P49006 195 aa17.45■□□□□ 0.38
CXCL3-204ENST00000511669 MTMR3Q13615 1198 aa17.45■□□□□ 0.38
CXCL3-204ENST00000511669 ZNF268Q14587 947 aaPredicted RBP17.45■□□□□ 0.38
CXCL3-204ENST00000511669 CYP1B1Q16678 543 aa17.45■□□□□ 0.38
CXCL3-204ENST00000511669 CCDC50Q8IVM0 306 aa17.45■□□□□ 0.38
CXCL3-204ENST00000511669 KATNAL2Q8IYT4 538 aa17.45■□□□□ 0.38
CXCL3-204ENST00000511669 C12orf50Q8NA57 414 aaPredicted RBP17.45■□□□□ 0.38
CXCL3-204ENST00000511669 EXD1Q8NHP7 514 aa17.45■□□□□ 0.38
CXCL3-204ENST00000511669 TFAP2BQ92481 460 aa17.45■□□□□ 0.38
CXCL3-204ENST00000511669 TRPV2Q9Y5S1 764 aa17.45■□□□□ 0.38
CXCL3-204ENST00000511669 TTI1O43156 1089 aa17.44■□□□□ 0.38
CXCL3-204ENST00000511669 RECQL4O94761 1208 aa17.44■□□□□ 0.38
CXCL3-204ENST00000511669 CYP3A5P20815 502 aa17.44■□□□□ 0.38
CXCL3-204ENST00000511669 HOXD10P28358 340 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms