RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 VPS36Q86VN1 386 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.88□□□□□ -0.51
COPS4-206ENST00000509093 AGGF1Q8N302 714 aaeCLIP11.88□□□□□ -0.51
COPS4-206ENST00000509093 LRRC71Q8N4P6 559 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 ENDOVQ8N8Q3 282 aaKnown RBP11.88□□□□□ -0.51
COPS4-206ENST00000509093 CKAP2Q8WWK9 683 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 SLC7A3Q8WY07 619 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 LENG1Q96BZ8 264 aaPredicted RBP11.88□□□□□ -0.51
COPS4-206ENST00000509093 GORASP1Q9BQQ3 440 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 SYT15Q9BQS2 421 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 ROPN1BQ9BZX4 212 aaPredicted RBP11.88□□□□□ -0.51
COPS4-206ENST00000509093 CARD9Q9H257 536 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 SEMA4AQ9H3S1 761 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 ROPN1Q9HAT0 212 aaPredicted RBP11.88□□□□□ -0.51
COPS4-206ENST00000509093 ZFYVE28Q9HCC9 887 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 KLHL14Q9P2G3 628 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 SNX24Q9Y343 169 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 EMSYQ7Z589 1322 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 DDX3YO15523 660 aaKnown RBP11.88□□□□□ -0.51
COPS4-206ENST00000509093 MAFO75444 373 aaPredicted RBP11.88□□□□□ -0.51
COPS4-206ENST00000509093 ATP5HO75947 161 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 UPP2O95045 317 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 LGALS2P05162 132 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 TRIM49P0CI25 452 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 TRIM49CP0CI26 452 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 SP100P23497 879 aaPredicted RBP11.88□□□□□ -0.51
COPS4-206ENST00000509093 SLCO1A2P46721 670 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 PEX5P50542 639 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 LRRC14Q15048 493 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 PPP1R15BQ5SWA1 713 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 DPY19L2P1Q6NXN4 242 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 SLC9A9Q8IVB4 645 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 MAP4K3Q8IVH8 894 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 RPUSD2Q8IZ73 545 aaKnown RBP11.88□□□□□ -0.51
COPS4-206ENST00000509093 USP6NLQ92738 828 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 EZH1Q92800 747 aaPredicted RBP11.88□□□□□ -0.51
COPS4-206ENST00000509093 BICD1Q96G01 975 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 RUNDC3BQ96NL0 473 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 TRAPPC9Q96Q05 1148 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 TRIM4Q9C037 500 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 ARHGAP39Q9C0H5 1083 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 SMARCAD1Q9H4L7 1026 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 C17orf75Q9HAS0 396 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 HSPBP1Q9NZL4 362 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 ARHGAP28Q9P2N2 729 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 GJD2Q9UKL4 321 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 SH3BP1Q9Y3L3 701 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 NCANO14594 1321 aa11.88□□□□□ -0.51
COPS4-206ENST00000509093 TMEM120BA0PK00 339 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 AOC2O75106 756 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 RNF8O76064 485 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 AFPP02771 609 aaKnown RBP11.87□□□□□ -0.51
COPS4-206ENST00000509093 EDN1P05305 212 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 GJB1P08034 283 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 PDHA1P08559 390 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 XRCC5P13010 732 aaKnown RBP11.87□□□□□ -0.51
COPS4-206ENST00000509093 SLC9A1P19634 815 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 RFC5P40937 340 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 TM4SF4P48230 202 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 DLG4P78352 724 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 DCAF12L1Q5VU92 463 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 VSTM1Q6UX27 236 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 ANKLE1Q8NAG6 615 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 B4GALNT2Q8NHY0 566 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 PPTC7Q8NI37 304 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 PLEKHO2Q8TD55 490 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 MGARPQ8TDB4 240 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 SH3TC2Q8TF17 1288 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 PPP1R13LQ8WUF5 828 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 ZNF668Q96K58 619 aaPredicted RBP11.87□□□□□ -0.51
COPS4-206ENST00000509093 FAM167AQ96KS9 214 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 VCXQ9H320 206 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 ABHD16BQ9H3Z7 469 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 PIDD1Q9HB75 910 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 METTL14Q9HCE5 456 aaKnown RBP11.87□□□□□ -0.51
COPS4-206ENST00000509093 ERVK-5Q9HDB9 667 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.87□□□□□ -0.51
COPS4-206ENST00000509093 ZMYND8Q9ULU4 1186 aaPredicted RBP11.87□□□□□ -0.51
COPS4-206ENST00000509093 FRMD4BQ9Y2L6 1034 aa11.87□□□□□ -0.51
COPS4-206ENST00000509093 LRRIQ4A6NIV6 560 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 RARGP13631 454 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 UCHL3P15374 230 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 FGFR4P22455 802 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 ATP5DP30049 168 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 MGAT5Q09328 741 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 SREBF2Q12772 1141 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 CUL3Q13618 768 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 CAPSQ13938 189 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 DUSP28Q4G0W2 176 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 UBAP2Q5T6F2 1119 aaKnown RBP11.86□□□□□ -0.51
COPS4-206ENST00000509093 IRGCQ6NXR0 463 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 TMEM154Q6P9G4 183 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 ARHGAP22Q7Z5H3 698 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 DNAAF5Q86Y56 855 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 PRPF31Q8WWY3 499 aaKnown RBP11.86□□□□□ -0.51
COPS4-206ENST00000509093 GRAMD1AQ96CP6 724 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 IFT43Q96FT9 208 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 TMEM237Q96Q45 408 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 RPS6KC1Q96S38 1066 aa11.86□□□□□ -0.51
COPS4-206ENST00000509093 C16orf70Q9BSU1 422 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms