RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 MAPK1P28482 360 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 KIR2DL1P43626 348 aaPredicted RBP5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 KIR2DL2P43627 348 aaPredicted RBP5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 HERVK_113P62684 666 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 ASIC1P78348 528 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 PPP2R5CQ13362 524 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 COL9A2Q14055 689 aaPredicted RBP5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 DHX8Q14562 1220 aaKnown RBP5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 KCTD2Q14681 263 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 TPD52L1Q16890 204 aaPredicted RBP5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 GNPTABQ3T906 1256 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 TREML2Q5T2D2 321 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 TMCO4Q5TGY1 634 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 CNNM4Q6P4Q7 775 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 SLC39A5Q6ZMH5 540 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 ERMP1Q7Z2K6 904 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 IGDCC3Q8IVU1 814 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 DRC7Q8IY82 874 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 ANKRD35Q8N283 1001 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 DNERQ8NFT8 737 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 CYP2W1Q8TAV3 490 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 GPRASP2Q96D09 838 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 MRFAP1L1Q96HT8 127 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 CDHR1Q96JP9 859 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 IWS1Q96ST2 819 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 EIF2AK1Q9BQI3 630 aaKnown RBP5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 TRIM9Q9C026 710 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 ASCC2Q9H1I8 757 aaPredicted RBP5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 MIR1-1HGQ9H1L0 117 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 BLOC1S4Q9NUP1 217 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 EXOC1Q9NV70 894 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 CYP39A1Q9NYL5 469 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 COL20A1Q9P218 1284 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 ADD3Q9UEY8 706 aaKnown RBP5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 SLC45A1Q9Y2W3 748 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 RIPK3Q9Y572 518 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 DCHS1Q96JQ0 3298 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 C5orf42Q9H799 3197 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 CHD9Q3L8U1 2897 aa5.85□□□□□ -1.47
HMGXB4-208ENST00000498325 KMT2BQ9UMN6 2715 aaPredicted RBP5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 RLFQ13129 1914 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 COL11A1P12107 1806 aaPredicted RBP5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 A0A087WWV3 80 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 BICDL2A1A5D9 508 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 UPK3BL1B0FP48 263 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 UPK3BL2E5RIL1 263 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 E9PMD0 336 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 PSMA7O14818 248 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 AKAP8O43823 692 aaKnown RBP5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 KLRC4O43908 158 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 DKC1O60832 514 aaKnown RBP eCLIP5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 MED24O75448 989 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 SLITRK3O94933 977 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 SERPINC1P01008 464 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 SSBP05455 408 aaKnown RBP eCLIP5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 KRT18P05783 430 aaKnown RBP5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 PLA2G4BP0C869 781 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 ARP10275 920 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 CASP1P29466 404 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 ZNF75DP51815 510 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 YARSP54577 528 aaKnown RBP5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 CCNA1P78396 465 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 MRPS9P82933 396 aaKnown RBP5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 SPIRE1Q08AE8 756 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 MTMR1Q13613 665 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 HSP90AA2PQ14568 343 aaPredicted RBP5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 NCAPHQ15003 741 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 STXBP2Q15833 593 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 CCL14Q16627 93 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 COBLL1Q53SF7 1204 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 SPATA1Q5VX52 437 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 SLC30A10Q6XR72 485 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 RNF111Q6ZNA4 994 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 UNC13DQ70J99 1090 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 MIER3Q7Z3K6 550 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 CATSPER3Q86XQ3 398 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 CCDC65Q8IXS2 484 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 SYT2Q8N9I0 419 aaPredicted RBP5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 TP53I13Q8NBR0 393 aaPredicted RBP5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 GIMAP8Q8ND71 665 aaPredicted RBP5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 SHCBP1Q8NEM2 672 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 ANKRD20A12PQ8NF67 263 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 SMCR8Q8TEV9 937 aaPredicted RBP5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 GJA10Q969M2 543 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 DHTKD1Q96HY7 919 aaPredicted RBP5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 MAP6Q96JE9 813 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 NAP1L5Q96NT1 182 aaPredicted RBP5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 PAGR1Q9BTK6 254 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 ASPNQ9BXN1 380 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 SPATC1LQ9H0A9 340 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 NKX2-4Q9H2Z4 354 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 MROH8Q9H579 483 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 AGO4Q9HCK5 861 aaKnown RBP5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 A1CFQ9NQ94 594 aaKnown RBP5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 KCNH7Q9NS40 1196 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 BTBD7Q9P203 1132 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 RWDD2AQ9UIY3 292 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 LOC285556D6RIA3 1793 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 LRRC37A2A6NM11 1700 aa5.84□□□□□ -1.47
HMGXB4-208ENST00000498325 BAHCC1Q9P281 2608 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms