RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 POLRMTO00411 1230 aaKnown RBP5.22□□□□□ -1.57
SMC4-227ENST00000497984 PCDHGA12O60330 932 aa5.22□□□□□ -1.57
SMC4-227ENST00000497984 HNRNPCP07910 306 aaKnown RBP eCLIP5.22□□□□□ -1.57
SMC4-227ENST00000497984 NDUFV1P49821 464 aa5.22□□□□□ -1.57
SMC4-227ENST00000497984 KLF9Q13886 244 aaPredicted RBP5.22□□□□□ -1.57
SMC4-227ENST00000497984 AOPEPQ8N6M6 819 aa5.22□□□□□ -1.57
SMC4-227ENST00000497984 ATL2Q8NHH9 583 aa5.22□□□□□ -1.57
SMC4-227ENST00000497984 KAT5Q92993 513 aa5.22□□□□□ -1.57
SMC4-227ENST00000497984 SCAMP4Q969E2 229 aa5.22□□□□□ -1.57
SMC4-227ENST00000497984 SMOC2Q9H3U7 446 aa5.22□□□□□ -1.57
SMC4-227ENST00000497984 SERTAD4Q9NUC0 356 aa5.22□□□□□ -1.57
SMC4-227ENST00000497984 MRPS18AQ9NVS2 196 aaKnown RBP5.22□□□□□ -1.57
SMC4-227ENST00000497984 EHD3Q9NZN3 535 aa5.22□□□□□ -1.57
SMC4-227ENST00000497984 BTBD3Q9Y2F9 522 aa5.22□□□□□ -1.57
SMC4-227ENST00000497984 PCDHGA9Q9Y5G4 932 aaKnown RBP5.22□□□□□ -1.57
SMC4-227ENST00000497984 PCDHGA8Q9Y5G5 932 aa5.22□□□□□ -1.57
SMC4-227ENST00000497984 PCDHGA7Q9Y5G6 932 aa5.22□□□□□ -1.57
SMC4-227ENST00000497984 PCDHGA6Q9Y5G7 932 aa5.22□□□□□ -1.57
SMC4-227ENST00000497984 PCDHGA3Q9Y5H0 932 aa5.22□□□□□ -1.57
SMC4-227ENST00000497984 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.22□□□□□ -1.571e-8■■■■■ 54.3
SMC4-227ENST00000497984 PRSS29PA6NIE9 313 aa5.21□□□□□ -1.58
SMC4-227ENST00000497984 NT5C1B-RDH14C9J2C7 533 aa5.21□□□□□ -1.58
SMC4-227ENST00000497984 F5H697 171 aa5.21□□□□□ -1.58
SMC4-227ENST00000497984 F2RL2O00254 374 aa5.21□□□□□ -1.58
SMC4-227ENST00000497984 EBLN1P0CF75 366 aa5.21□□□□□ -1.58
SMC4-227ENST00000497984 JUPP14923 745 aa5.21□□□□□ -1.58
SMC4-227ENST00000497984 ZFXP17010 805 aaPredicted RBP5.21□□□□□ -1.58
SMC4-227ENST00000497984 PROSER3Q2NL68 480 aa5.21□□□□□ -1.58
SMC4-227ENST00000497984 CCDC93Q567U6 631 aa5.21□□□□□ -1.58
SMC4-227ENST00000497984 PGM2L1Q6PCE3 622 aa5.21□□□□□ -1.58
SMC4-227ENST00000497984 SLC30A10Q6XR72 485 aa5.21□□□□□ -1.58
SMC4-227ENST00000497984 FAM109AQ8N4B1 249 aa5.21□□□□□ -1.58
SMC4-227ENST00000497984 NSUN6Q8TEA1 469 aaKnown RBP5.21□□□□□ -1.58
SMC4-227ENST00000497984 FKBP10Q96AY3 582 aa5.21□□□□□ -1.58
SMC4-227ENST00000497984 COA7Q96BR5 231 aa5.21□□□□□ -1.58
SMC4-227ENST00000497984 REPS1Q96D71 796 aa5.21□□□□□ -1.58
SMC4-227ENST00000497984 TPSD1Q9BZJ3 242 aa5.21□□□□□ -1.58
SMC4-227ENST00000497984 SEMA4CQ9C0C4 833 aa5.21□□□□□ -1.58
SMC4-227ENST00000497984 CACNA1IQ9P0X4 2223 aa5.2□□□□□ -1.58
SMC4-227ENST00000497984 FNDC1Q4ZHG4 1894 aaPredicted RBP5.2□□□□□ -1.58
SMC4-227ENST00000497984 KCNAB3O43448 404 aa5.2□□□□□ -1.58
SMC4-227ENST00000497984 TRIAP1O43715 76 aa5.2□□□□□ -1.58
SMC4-227ENST00000497984 NHLRC4P0CG21 123 aaPredicted RBP5.2□□□□□ -1.58
SMC4-227ENST00000497984 MALP21145 153 aa5.2□□□□□ -1.58
SMC4-227ENST00000497984 KELP23276 732 aa5.2□□□□□ -1.58
SMC4-227ENST00000497984 SNAPC2Q13487 334 aa5.2□□□□□ -1.58
SMC4-227ENST00000497984 BMPR2Q13873 1038 aa5.2□□□□□ -1.58
SMC4-227ENST00000497984 SLC44A4Q53GD3 710 aa5.2□□□□□ -1.58
SMC4-227ENST00000497984 TAF2Q6P1X5 1199 aa5.2□□□□□ -1.58
SMC4-227ENST00000497984 NEK8Q86SG6 692 aa5.2□□□□□ -1.58
SMC4-227ENST00000497984 RPL36ALQ969Q0 106 aaKnown RBP5.2□□□□□ -1.58
SMC4-227ENST00000497984 ZBTB9Q96C00 473 aa5.2□□□□□ -1.58
SMC4-227ENST00000497984 ZNF48Q96MX3 618 aaPredicted RBP5.2□□□□□ -1.58
SMC4-227ENST00000497984 VRK1Q99986 396 aaPredicted RBP5.2□□□□□ -1.58
SMC4-227ENST00000497984 ACTRT3Q9BYD9 372 aa5.2□□□□□ -1.58
SMC4-227ENST00000497984 PUS7LQ9H0K6 701 aaKnown RBP5.2□□□□□ -1.58
SMC4-227ENST00000497984 MKS1Q9NXB0 559 aa5.2□□□□□ -1.58
SMC4-227ENST00000497984 SIDT1Q9NXL6 827 aaKnown RBP5.2□□□□□ -1.58
SMC4-227ENST00000497984 TMA7Q9Y2S6 64 aaKnown RBP5.2□□□□□ -1.58
SMC4-227ENST00000497984 ZNF213O14771 459 aa5.19□□□□□ -1.58
SMC4-227ENST00000497984 EPHB2P29323 1055 aa5.19□□□□□ -1.58
SMC4-227ENST00000497984 PTGER1P34995 402 aa5.19□□□□□ -1.58
SMC4-227ENST00000497984 TOB1P50616 345 aaPredicted RBP5.19□□□□□ -1.58
SMC4-227ENST00000497984 PSMC1P62191 440 aaKnown RBP5.19□□□□□ -1.58
SMC4-227ENST00000497984 TCF15Q12870 199 aa5.19□□□□□ -1.58
SMC4-227ENST00000497984 HABP2Q14520 560 aaPredicted RBP5.19□□□□□ -1.58
SMC4-227ENST00000497984 ACAP2Q15057 778 aa5.19□□□□□ -1.58
SMC4-227ENST00000497984 ETFDHQ16134 617 aa5.19□□□□□ -1.58
SMC4-227ENST00000497984 PLAC9Q5JTB6 97 aa5.19□□□□□ -1.58
SMC4-227ENST00000497984 PPP4R3AQ6IN85 833 aa5.19□□□□□ -1.58
SMC4-227ENST00000497984 ZNF551Q7Z340 670 aaPredicted RBP5.19□□□□□ -1.58
SMC4-227ENST00000497984 PSD4Q8NDX1 1056 aa5.19□□□□□ -1.58
SMC4-227ENST00000497984 FAXDC2Q96IV6 333 aa5.19□□□□□ -1.58
SMC4-227ENST00000497984 GPR35Q9HC97 309 aa5.19□□□□□ -1.58
SMC4-227ENST00000497984 RLIMQ9NVW2 624 aa5.19□□□□□ -1.58
SMC4-227ENST00000497984 SLC5A4Q9NY91 659 aa5.19□□□□□ -1.58
SMC4-227ENST00000497984 SERPINB13Q9UIV8 391 aa5.19□□□□□ -1.58
SMC4-227ENST00000497984 AGAP1Q9UPQ3 857 aa5.19□□□□□ -1.58
SMC4-227ENST00000497984 ZNF785A8K8V0 405 aa5.18□□□□□ -1.58
SMC4-227ENST00000497984 TISP43B9A030 160 aa5.18□□□□□ -1.58
SMC4-227ENST00000497984 FZD9O00144 591 aa5.18□□□□□ -1.58
SMC4-227ENST00000497984 MT-CO1P00395 513 aa5.18□□□□□ -1.58
SMC4-227ENST00000497984 GJB1P08034 283 aa5.18□□□□□ -1.58
SMC4-227ENST00000497984 CYP2C19P33261 490 aa5.18□□□□□ -1.58
SMC4-227ENST00000497984 TUBA4AP68366 448 aa5.18□□□□□ -1.58
SMC4-227ENST00000497984 KIF23Q02241 960 aaPredicted RBP5.18□□□□□ -1.58
SMC4-227ENST00000497984 DSC2Q02487 901 aa5.18□□□□□ -1.58
SMC4-227ENST00000497984 TBCCQ15814 346 aa5.18□□□□□ -1.58
SMC4-227ENST00000497984 KHDC1Q4VXA5 237 aaKnown RBP5.18□□□□□ -1.58
SMC4-227ENST00000497984 RBM20Q5T481 1227 aaKnown RBP5.18□□□□□ -1.58
SMC4-227ENST00000497984 MORN5Q5VZ52 161 aa5.18□□□□□ -1.58
SMC4-227ENST00000497984 CEP85Q6P2H3 762 aa5.18□□□□□ -1.58
SMC4-227ENST00000497984 SLC4A10Q6U841 1118 aa5.18□□□□□ -1.58
SMC4-227ENST00000497984 NECAB2Q7Z6G3 386 aa5.18□□□□□ -1.58
SMC4-227ENST00000497984 FCRL4Q96PJ5 515 aa5.18□□□□□ -1.58
SMC4-227ENST00000497984 BRD9Q9H8M2 597 aa5.18□□□□□ -1.58
SMC4-227ENST00000497984 SERHLQ9NQF3 203 aa5.18□□□□□ -1.58
SMC4-227ENST00000497984 ARHGEF3Q9NR81 526 aa5.18□□□□□ -1.58
SMC4-227ENST00000497984 KLHL33A6NCF5 533 aa5.17□□□□□ -1.58
SMC4-227ENST00000497984 MOSPD3O75425 235 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms