RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 OVOL3O00110 214 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 KIAA0355O15063 1070 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 PROM1O43490 865 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 AP1G1O43747 822 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 RFPL1O75677 317 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 AHSGP02765 367 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 IL12RB1P42701 662 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 CLK3P49761 638 aaKnown RBP4.78□□□□□ -1.64
CD46-217ENST00000493796 MRPS35P82673 323 aaKnown RBP4.78□□□□□ -1.64
CD46-217ENST00000493796 TCF15Q12870 199 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 PLS1Q14651 629 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 ZNF169Q14929 603 aaPredicted RBP4.78□□□□□ -1.64
CD46-217ENST00000493796 ERCC6LQ2NKX8 1250 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 PLEKHG6Q3KR16 790 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 PREPLQ4J6C6 727 aaPredicted RBP4.78□□□□□ -1.64
CD46-217ENST00000493796 CCDC157Q569K6 752 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 ODR4Q5SWX8 454 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 VWA1Q6PCB0 445 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 MICALCLQ6ZW33 695 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 DNAJC10Q8IXB1 793 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 SLC30A5Q8TAD4 765 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 SNX19Q92543 992 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 CDK5RAP3Q96JB5 506 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 CGRRF1Q99675 332 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 TINAGL1Q9GZM7 467 aaPredicted RBP4.78□□□□□ -1.64
CD46-217ENST00000493796 SIK2Q9H0K1 926 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 RIOX1Q9H6W3 641 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.78□□□□□ -1.64
CD46-217ENST00000493796 MRPS18AQ9NVS2 196 aaKnown RBP4.78□□□□□ -1.64
CD46-217ENST00000493796 FOXJ2Q9P0K8 574 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 LRIT1Q9P2V4 623 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 AGAP1Q9UPQ3 857 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 THRAP3Q9Y2W1 955 aaKnown RBP4.78□□□□□ -1.64
CD46-217ENST00000493796 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.78□□□□□ -1.64
CD46-217ENST00000493796 PCDHA1Q9Y5I3 950 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 SYNJ1O43426 1573 aa4.78□□□□□ -1.64
CD46-217ENST00000493796 CUX1P39880 1505 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 SPATA31A3Q5VYP0 1347 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 YY2O15391 372 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 PEX1O43933 1283 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 GNAI2P04899 355 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 HSPA6P17066 643 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 FOLR3P41439 243 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 NPTX2P47972 431 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 SIM1P81133 766 aaPredicted RBP4.77□□□□□ -1.65
CD46-217ENST00000493796 EMC10Q5UCC4 262 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 KIAA0895LQ68EN5 471 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 SLC30A10Q6XR72 485 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 PPP1R32Q7Z5V6 425 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 USP37Q86T82 979 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 TPH2Q8IWU9 490 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 SIMC1Q8NDZ2 872 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 BRIX1Q8TDN6 353 aaKnown RBP4.77□□□□□ -1.65
CD46-217ENST00000493796 ACTRT2Q8TDY3 377 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 DIS3LQ8TF46 1054 aaKnown RBP4.77□□□□□ -1.65
CD46-217ENST00000493796 LPIN2Q92539 896 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 DDX17Q92841 729 aaKnown RBP4.77□□□□□ -1.65
CD46-217ENST00000493796 SLC35A4Q96G79 324 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 PDLIM2Q96JY6 352 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 NMRK2Q9NPI5 230 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 ZIM2Q9NZV7 527 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 STXBP5LQ9Y2K9 1186 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 LAMC3Q9Y6N6 1575 aa4.77□□□□□ -1.65
CD46-217ENST00000493796 KIF20AO95235 890 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 PPP3CBP16298 524 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 RARRES1P49788 294 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 EXOSC9Q06265 439 aaKnown RBP4.76□□□□□ -1.65
CD46-217ENST00000493796 GTF2H3Q13889 308 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 STRIP1Q5VSL9 837 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 TAF2Q6P1X5 1199 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 B3GNT9Q6UX72 402 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 PRIMA1Q86XR5 153 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 RAVER1Q8IY67 606 aaKnown RBP4.76□□□□□ -1.65
CD46-217ENST00000493796 FAM9AQ8IZU1 332 aaPredicted RBP4.76□□□□□ -1.65
CD46-217ENST00000493796 PSD4Q8NDX1 1056 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 PLBD2Q8NHP8 589 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 KLHDC4Q8TBB5 520 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 CAGE1Q8TC20 777 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 FBXO41Q8TF61 875 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 LRGUKQ96M69 825 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 CRAMP1Q96RY5 1269 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 SMOC2Q9H3U7 446 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 PRDM13Q9H4Q3 707 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 INSL6Q9Y581 213 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 POLR2AP24928 1970 aaKnown RBP4.76□□□□□ -1.65
CD46-217ENST00000493796 RUSC2Q8N2Y8 1516 aa4.76□□□□□ -1.65
CD46-217ENST00000493796 CUX2O14529 1486 aa4.75□□□□□ -1.65
CD46-217ENST00000493796 FANCD2Q9BXW9 1451 aa4.75□□□□□ -1.65
CD46-217ENST00000493796 H3BML4 177 aa4.75□□□□□ -1.65
CD46-217ENST00000493796 MGST3O14880 152 aa4.75□□□□□ -1.65
CD46-217ENST00000493796 MPPED1O15442 326 aa4.75□□□□□ -1.65
CD46-217ENST00000493796 PPFIA2O75334 1257 aa4.75□□□□□ -1.65
CD46-217ENST00000493796 VPS4BO75351 444 aa4.75□□□□□ -1.65
CD46-217ENST00000493796 SOAT2O75908 522 aa4.75□□□□□ -1.65
CD46-217ENST00000493796 HDCP19113 662 aa4.75□□□□□ -1.65
CD46-217ENST00000493796 NDUFV1P49821 464 aa4.75□□□□□ -1.65
CD46-217ENST00000493796 TOB1P50616 345 aaPredicted RBP4.75□□□□□ -1.65
CD46-217ENST00000493796 HNRNPMP52272 730 aaKnown RBP eCLIP4.75□□□□□ -1.652e-9■■■■■ 29.7
CD46-217ENST00000493796 PTPRRQ15256 657 aa4.75□□□□□ -1.65
CD46-217ENST00000493796 TSHZ1Q6ZSZ6 1077 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms