RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 TAS2R1Q9NYW7 299 aa21.84■■□□□ 1.09
COL13A1-208ENST00000479733 SENP1Q9P0U3 644 aa21.84■■□□□ 1.09
COL13A1-208ENST00000479733 MYPNQ86TC9 1320 aa21.84■■□□□ 1.09
COL13A1-208ENST00000479733 LIASO43766 372 aa21.84■■□□□ 1.09
COL13A1-208ENST00000479733 RTN3O95197 1032 aaPredicted RBP21.84■■□□□ 1.09
COL13A1-208ENST00000479733 CRKP46108 304 aa21.84■■□□□ 1.09
COL13A1-208ENST00000479733 SERPINB4P48594 390 aa21.84■■□□□ 1.09
COL13A1-208ENST00000479733 ZYXQ15942 572 aaKnown RBP21.84■■□□□ 1.09
COL13A1-208ENST00000479733 MDH1BQ5I0G3 518 aa21.84■■□□□ 1.09
COL13A1-208ENST00000479733 TMEM179Q6ZVK1 233 aa21.84■■□□□ 1.09
COL13A1-208ENST00000479733 TDRPQ86YL5 185 aa21.84■■□□□ 1.09
COL13A1-208ENST00000479733 TMEM8AQ9HCN3 771 aa21.84■■□□□ 1.09
COL13A1-208ENST00000479733 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.84■■□□□ 1.09
COL13A1-208ENST00000479733 SGK1O00141 431 aa21.83■■□□□ 1.09
COL13A1-208ENST00000479733 DSG3P32926 999 aa21.83■■□□□ 1.09
COL13A1-208ENST00000479733 RARRES1P49788 294 aa21.83■■□□□ 1.09
COL13A1-208ENST00000479733 GPC3P51654 580 aa21.83■■□□□ 1.09
COL13A1-208ENST00000479733 GPX6P59796 221 aa21.83■■□□□ 1.09
COL13A1-208ENST00000479733 SAE1Q9UBE0 346 aaPredicted RBP21.83■■□□□ 1.09
COL13A1-208ENST00000479733 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.83■■□□□ 1.09
COL13A1-208ENST00000479733 AMPD1P23109 780 aa21.83■■□□□ 1.09
COL13A1-208ENST00000479733 GCLCP48506 637 aaPredicted RBP21.83■■□□□ 1.09
COL13A1-208ENST00000479733 MFSD7Q6UXD7 560 aa21.83■■□□□ 1.09
COL13A1-208ENST00000479733 CENPUQ71F23 418 aa21.83■■□□□ 1.09
COL13A1-208ENST00000479733 PTCD3Q96EY7 689 aaKnown RBP21.83■■□□□ 1.09
COL13A1-208ENST00000479733 GMCL1Q96IK5 515 aa21.83■■□□□ 1.09
COL13A1-208ENST00000479733 TMEM120AQ9BXJ8 343 aa21.83■■□□□ 1.09
COL13A1-208ENST00000479733 TLR3O15455 904 aaKnown RBP21.83■■□□□ 1.08
COL13A1-208ENST00000479733 BBOX1O75936 387 aa21.83■■□□□ 1.08
COL13A1-208ENST00000479733 ZWINTO95229 277 aa21.83■■□□□ 1.08
COL13A1-208ENST00000479733 NEK3P51956 506 aa21.83■■□□□ 1.08
COL13A1-208ENST00000479733 ARMC3Q5W041 872 aa21.83■■□□□ 1.08
COL13A1-208ENST00000479733 SPOPLQ6IQ16 392 aa21.83■■□□□ 1.08
COL13A1-208ENST00000479733 NLRX1Q86UT6 975 aa21.83■■□□□ 1.08
COL13A1-208ENST00000479733 TTC17Q96AE7 1141 aa21.83■■□□□ 1.08
COL13A1-208ENST00000479733 TSSK1BQ9BXA7 367 aa21.83■■□□□ 1.08
COL13A1-208ENST00000479733 SYNCQ9H7C4 482 aa21.83■■□□□ 1.08
COL13A1-208ENST00000479733 MAP3K7O43318 606 aa21.82■■□□□ 1.08
COL13A1-208ENST00000479733 TJP3O95049 919 aa21.82■■□□□ 1.08
COL13A1-208ENST00000479733 STAT2P52630 851 aa21.82■■□□□ 1.08
COL13A1-208ENST00000479733 SOX10P56693 466 aa21.82■■□□□ 1.08
COL13A1-208ENST00000479733 GEMIN4P57678 1058 aaKnown RBP21.82■■□□□ 1.08
COL13A1-208ENST00000479733 SH3TC2Q8TF17 1288 aa21.82■■□□□ 1.08
COL13A1-208ENST00000479733 COA1Q9GZY4 146 aa21.82■■□□□ 1.08
COL13A1-208ENST00000479733 SERPINB2P05120 415 aa21.82■■□□□ 1.08
COL13A1-208ENST00000479733 OCRLQ01968 901 aa21.82■■□□□ 1.08
COL13A1-208ENST00000479733 PLA2G4FQ68DD2 849 aa21.82■■□□□ 1.08
COL13A1-208ENST00000479733 C3orf62Q6ZUJ4 267 aa21.82■■□□□ 1.08
COL13A1-208ENST00000479733 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.82■■□□□ 1.08
COL13A1-208ENST00000479733 FAM161BQ96MY7 647 aa21.82■■□□□ 1.08
COL13A1-208ENST00000479733 GBP5Q96PP8 586 aa21.82■■□□□ 1.08
COL13A1-208ENST00000479733 AVENQ9NQS1 362 aaPredicted RBP21.82■■□□□ 1.08
COL13A1-208ENST00000479733 FAM198AQ9UFP1 575 aa21.82■■□□□ 1.08
COL13A1-208ENST00000479733 ATP2A1O14983 1001 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 ALOX15BO15296 676 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 KRT1P04264 644 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 PGM1P36871 562 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 DYNLT1P63172 113 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 GTF2BQ00403 316 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 MAMLD1Q13495 774 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 CCDC62Q6P9F0 684 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 C12orf56Q8IXR9 622 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 PYROXD1Q8WU10 500 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 FAM81BQ96LP2 452 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 PSTPIP1O43586 416 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 ITGB5P18084 799 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 SLC18A1P54219 525 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 RPL7AP62424 266 aaKnown RBP21.81■■□□□ 1.08
COL13A1-208ENST00000479733 CRY2Q49AN0 593 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 MTHFD1LQ6UB35 978 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 KATNAL2Q8IYT4 538 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 GMCL1P1Q8NEA9 526 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 PAFAH2Q99487 392 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 KRT82Q9NSB4 513 aa21.81■■□□□ 1.08
COL13A1-208ENST00000479733 MSS51Q4VC12 460 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 SYCP2LQ5T4T6 812 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 EXD1Q8NHP7 514 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 CYTH2Q99418 400 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 C1orf112Q9NSG2 853 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 RABGEF1Q9UJ41 708 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 RPL26L1Q9UNX3 145 aaKnown RBP21.8■■□□□ 1.08
COL13A1-208ENST00000479733 BAG2O95816 211 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 GLRA2P23416 452 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 LMNB2Q03252 620 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 HIF1AQ16665 826 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 LIN9Q5TKA1 542 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 CEP128Q6ZU80 1094 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 RHPN2Q8IUC4 686 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 ZNF276Q8N554 614 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 FBXO27Q8NI29 283 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 IFT43Q96FT9 208 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 PCMTD2Q9NV79 361 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 CLUHO75153 1309 aa21.8■■□□□ 1.08
COL13A1-208ENST00000479733 P4HBP07237 508 aaKnown RBP21.79■■□□□ 1.08
COL13A1-208ENST00000479733 BGNP21810 368 aa21.79■■□□□ 1.08
COL13A1-208ENST00000479733 AP1B1Q10567 949 aa21.79■■□□□ 1.08
COL13A1-208ENST00000479733 TRAF1Q13077 416 aa21.79■■□□□ 1.08
COL13A1-208ENST00000479733 LAMB3Q13751 1172 aa21.79■■□□□ 1.08
COL13A1-208ENST00000479733 ZRSR2Q15696 482 aaKnown RBP21.79■■□□□ 1.08
COL13A1-208ENST00000479733 RASIP1Q5U651 963 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms