RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 TCTN1Q2MV58 587 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 SGO2Q562F6 1265 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 ALKBH5Q6P6C2 394 aaKnown RBP10.4□□□□□ -0.74
CCM2-204ENST00000470837 TOGARAM2Q6ZUX3 1019 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 ZNF365Q70YC5 407 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 NOP9Q86U38 636 aaKnown RBP10.4□□□□□ -0.74
CCM2-204ENST00000470837 ZNF280BQ86YH2 543 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 COLGALT2Q8IYK4 626 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 MSANTD4Q8NCY6 345 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 SPATA18Q8TC71 538 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 KIAA1524Q8TCG1 905 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 HASPINQ8TF76 798 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 RABGGTAQ92696 567 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 DESI2Q9BSY9 194 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 AAASQ9NRG9 546 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 TRMT1Q9NXH9 659 aaKnown RBP10.4□□□□□ -0.74
CCM2-204ENST00000470837 HESX1Q9UBX0 185 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 PPP2R2CQ9Y2T4 447 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 SLC4A7Q9Y6M7 1214 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 DNAH12Q6ZR08 3092 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 SF3B1O75533 1304 aaKnown RBP eCLIP10.39□□□□□ -0.75
CCM2-204ENST00000470837 TMEM189-UBE2V1I3L0A0 370 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 SPTLC1O15269 473 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 MMEP08473 750 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 PDGFRBP09619 1106 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 LAG3P18627 525 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 WARSP23381 471 aaKnown RBP10.39□□□□□ -0.75
CCM2-204ENST00000470837 NSFP46459 744 aaKnown RBP10.39□□□□□ -0.75
CCM2-204ENST00000470837 GATMP50440 423 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 ZNF132P52740 706 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 NAP1L1P55209 391 aaKnown RBP10.39□□□□□ -0.75
CCM2-204ENST00000470837 SNX16P57768 344 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 CYP27A1Q02318 531 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 TIGD5Q53EQ6 642 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 WSCD1Q658N2 575 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 SCARA3Q6AZY7 606 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 CMTR2Q8IYT2 770 aaKnown RBP10.39□□□□□ -0.75
CCM2-204ENST00000470837 CCAR2Q8N163 923 aaKnown RBP10.39□□□□□ -0.75
CCM2-204ENST00000470837 TMEM130Q8N3G9 435 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 PDCL2Q8N4E4 241 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 ACRBPQ8NEB7 543 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 SLC20A1Q8WUM9 679 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 TRIM11Q96F44 468 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 NOX5Q96PH1 765 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 SLC9A7Q96T83 725 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 MRPL45Q9BRJ2 306 aaKnown RBP10.39□□□□□ -0.75
CCM2-204ENST00000470837 PAAF1Q9BRP4 392 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 SDCBP2Q9H190 292 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 NRDE2Q9H7Z3 1164 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 CACNG4Q9UBN1 327 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 NOCTQ9UK39 431 aaKnown RBP10.39□□□□□ -0.75
CCM2-204ENST00000470837 ADAM28Q9UKQ2 775 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 PCDHB8Q9UN66 801 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 L1RE1Q9UN81 338 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 PCDHA13Q9Y5I0 950 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 ADGRG1Q9Y653 693 aa10.39□□□□□ -0.75
CCM2-204ENST00000470837 A0A087X0T9 212 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 TMCO5BA8MYB1 307 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 RBAK-RBAKDNI3L0D1 243 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 DDX3XO00571 662 aaKnown RBP eCLIP10.38□□□□□ -0.75
CCM2-204ENST00000470837 NRP1O14786 923 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 SYN3O14994 580 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 LCA5LO95447 670 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 LSM8O95777 96 aaKnown RBP10.38□□□□□ -0.75
CCM2-204ENST00000470837 H2AFZP0C0S5 128 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 FAM228BP0C875 321 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 TYMPP19971 482 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 BRD2P25440 801 aaKnown RBP10.38□□□□□ -0.75
CCM2-204ENST00000470837 AARSP49588 968 aaKnown RBP eCLIP10.38□□□□□ -0.75
CCM2-204ENST00000470837 VAV2P52735 878 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 RAD23BP54727 409 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 DEFB103AP81534 67 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 TSPY1Q01534 308 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 YWHAHQ04917 246 aaPredicted RBP10.38□□□□□ -0.75
CCM2-204ENST00000470837 MAPRE1Q15691 268 aaKnown RBP10.38□□□□□ -0.75
CCM2-204ENST00000470837 IFI16Q16666 785 aaKnown RBP10.38□□□□□ -0.75
CCM2-204ENST00000470837 TMEM240Q5SV17 173 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 OVOS1Q6IE37 1185 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 H2AFVQ71UI9 128 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 ACOT1Q86TX2 421 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 CRIPAKQ8N1N5 446 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 UBR7Q8N806 425 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 SLC4A11Q8NBS3 891 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 TMEM35BQ8NCS4 154 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 PHOSPHO2Q8TCD6 241 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 ZNF606Q8WXB4 792 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 CTNNBL1Q8WYA6 563 aaPredicted RBP10.38□□□□□ -0.75
CCM2-204ENST00000470837 HERVK_113Q902F9 699 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 SUSD3Q96L08 255 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 ZNF558Q96NG5 402 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 MED10Q9BTT4 135 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 ZNF518BQ9C0D4 1074 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 MIS12Q9H081 205 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 SYNCQ9H7C4 482 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 LZTFL1Q9NQ48 299 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 DDX43Q9NXZ2 648 aaKnown RBP10.38□□□□□ -0.75
CCM2-204ENST00000470837 DNAJB4Q9UDY4 337 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 STK39Q9UEW8 545 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 NAGPAQ9UK23 515 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 STXBP5LQ9Y2K9 1186 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms