RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 GAB3Q8WWW8 586 aa5.86□□□□□ -1.47
PTPN4-209ENST00000469511 IRF7Q92985 503 aa5.86□□□□□ -1.47
PTPN4-209ENST00000469511 CHFRQ96EP1 664 aa5.86□□□□□ -1.47
PTPN4-209ENST00000469511 EDEM2Q9BV94 578 aa5.86□□□□□ -1.47
PTPN4-209ENST00000469511 PHACTR1Q9C0D0 580 aa5.86□□□□□ -1.47
PTPN4-209ENST00000469511 DUSP15Q9H1R2 295 aaPredicted RBP5.86□□□□□ -1.47
PTPN4-209ENST00000469511 DHX33Q9H6R0 707 aaKnown RBP5.86□□□□□ -1.47
PTPN4-209ENST00000469511 GOLGA2P5Q9HBQ8 144 aa5.86□□□□□ -1.47
PTPN4-209ENST00000469511 FBRSL1Q9HCM7 1045 aaKnown RBP5.86□□□□□ -1.47
PTPN4-209ENST00000469511 ANO2Q9NQ90 1003 aa5.86□□□□□ -1.47
PTPN4-209ENST00000469511 GTSE1Q9NYZ3 720 aa5.86□□□□□ -1.47
PTPN4-209ENST00000469511 GDE1Q9NZC3 331 aa5.86□□□□□ -1.47
PTPN4-209ENST00000469511 RGL1Q9NZL6 768 aa5.86□□□□□ -1.47
PTPN4-209ENST00000469511 STIM2Q9P246 746 aa5.86□□□□□ -1.47
PTPN4-209ENST00000469511 GIT1Q9Y2X7 761 aa5.86□□□□□ -1.47
PTPN4-209ENST00000469511 LAMA5O15230 3695 aa5.86□□□□□ -1.47
PTPN4-209ENST00000469511 GOLGA4Q13439 2230 aaKnown RBP5.86□□□□□ -1.47
PTPN4-209ENST00000469511 CITO14578 2027 aa5.86□□□□□ -1.47
PTPN4-209ENST00000469511 ASH1LQ9NR48 2969 aaKnown RBP5.85□□□□□ -1.47
PTPN4-209ENST00000469511 SF3B1O75533 1304 aaKnown RBP eCLIP5.85□□□□□ -1.47
PTPN4-209ENST00000469511 SPAARA0A1B0GVQ0 90 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 LNP1A1A4G5 178 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 SPECC1L-ADORA2AF8WAN1 911 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 INO80B-WBP1J3KQ70 363 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 SLC37A4O43826 429 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 RPP40O75818 363 aaKnown RBP5.85□□□□□ -1.47
PTPN4-209ENST00000469511 ERLIN2O94905 339 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 PRB1P04280 392 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 POU2F2P09086 479 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 MYL4P12829 197 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 CPA1P15085 419 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 PTPN2P17706 415 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 FGFR3P22607 806 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 SFNP31947 248 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 TXLNAP40222 546 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 CDR1P51861 262 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 ARPP19P56211 112 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 PTENP60484 403 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 FAM193AP78312 1265 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 CDC42EP1Q00587 391 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 EXOSC10Q01780 885 aaKnown RBP5.85□□□□□ -1.47
PTPN4-209ENST00000469511 ROR1Q01973 937 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 TNK2Q07912 1038 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 POU4F2Q12837 409 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 GRIK3Q13003 919 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 CAPSQ13938 189 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 CCINQ13939 588 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 NECTIN1Q15223 517 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 TEAD2Q15562 447 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 COL28A1Q2UY09 1125 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 UVSSAQ2YD98 709 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 C11orf91Q3C1V1 193 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 ADCK5Q3MIX3 580 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 PLK5Q496M5 336 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 GLRA4Q5JXX5 417 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 EEF1DP3Q658K8 133 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 CREB3L3Q68CJ9 461 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 PDZD3Q86UT5 571 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 REXO1Q8N1G1 1221 aaKnown RBP5.85□□□□□ -1.47
PTPN4-209ENST00000469511 CNNM3Q8NE01 707 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 SHKBP1Q8TBC3 707 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 ZSCAN18Q8TBC5 510 aaPredicted RBP5.85□□□□□ -1.47
PTPN4-209ENST00000469511 ETNPPLQ8TBG4 499 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 PSPC1Q8WXF1 523 aaKnown RBP5.85□□□□□ -1.47
PTPN4-209ENST00000469511 CRELD1Q96HD1 420 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 CEP170P1Q96L14 293 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 RIT2Q99578 217 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 MTA3Q9BTC8 594 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 LSG1Q9H089 658 aaKnown RBP5.85□□□□□ -1.47
PTPN4-209ENST00000469511 UBN1Q9NPG3 1134 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 TRPV5Q9NQA5 729 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 AVENQ9NQS1 362 aaPredicted RBP5.85□□□□□ -1.47
PTPN4-209ENST00000469511 CEP72Q9P209 647 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 MTRRQ9UBK8 725 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 OBSL1O75147 1896 aa5.85□□□□□ -1.47
PTPN4-209ENST00000469511 ESYT2A0FGR8 921 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 ARHGEF37A1IGU5 675 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 MYBPHLA2RUH7 354 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 OTOL1A6NHN0 477 aaPredicted RBP5.84□□□□□ -1.47
PTPN4-209ENST00000469511 GOLGA8AA7E2F4 631 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 GOLGA8BA8MQT2 603 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 ZNF263O14978 683 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 ZBTB43O43298 467 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 ABLIM3O94929 683 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 VNN2O95498 520 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 PRKCBP05771 671 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 CCDC192P0DO97 292 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 GLRA2P23416 452 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 BRD2P25440 801 aaKnown RBP5.84□□□□□ -1.47
PTPN4-209ENST00000469511 U2AF2P26368 475 aaKnown RBP eCLIP5.84□□□□□ -1.47
PTPN4-209ENST00000469511 CLCNKBP51801 687 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 KPNA1P52294 538 aaPredicted RBP5.84□□□□□ -1.47
PTPN4-209ENST00000469511 PSMC5P62195 406 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 IRX4P78413 519 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 CREB5Q02930 508 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 SOX4Q06945 474 aaPredicted RBP5.84□□□□□ -1.47
PTPN4-209ENST00000469511 TUSC3Q13454 348 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 CTTNQ14247 550 aaKnown RBP5.84□□□□□ -1.47
PTPN4-209ENST00000469511 PPP2R5DQ14738 602 aa5.84□□□□□ -1.47
PTPN4-209ENST00000469511 EMC2Q15006 297 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms