RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 PROSCO94903 275 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 GBP2P32456 591 aaPredicted RBP12.87□□□□□ -0.35
CLDN4-203ENST00000435050 SLC1A1P43005 524 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 PSMC4P43686 418 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 GCLCP48506 637 aaPredicted RBP12.87□□□□□ -0.35
CLDN4-203ENST00000435050 ACOT1Q86TX2 421 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 DNAJB3Q8WWF6 145 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 SNX25Q9H3E2 840 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 DPP3Q9NY33 737 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 PCDHA3Q9Y5H8 950 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 ARFGEF1Q9Y6D6 1849 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 GOLGA6L7A0A1B0GV03 622 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 RASGRF2O14827 1237 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 GRIN3BO60391 1043 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 CYP1A2P05177 515 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 ARF4P18085 180 aaPredicted RBP12.87□□□□□ -0.35
CLDN4-203ENST00000435050 RPL21P46778 160 aaKnown RBP12.87□□□□□ -0.35
CLDN4-203ENST00000435050 NOMO3P69849 1222 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 BASP1P80723 227 aaKnown RBP12.87□□□□□ -0.35
CLDN4-203ENST00000435050 SCARA3Q6AZY7 606 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 DENND1BQ6P3S1 775 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 SLFN11Q7Z7L1 901 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 BRI3BPQ8WY22 251 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 C10orf88Q9H8K7 445 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 HEY1Q9Y5J3 304 aa12.87□□□□□ -0.35
CLDN4-203ENST00000435050 F5H423 210 aaPredicted RBP12.86□□□□□ -0.35
CLDN4-203ENST00000435050 O00370 1275 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 TJP3O95049 919 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 ASS1P00966 412 aaKnown RBP12.86□□□□□ -0.35
CLDN4-203ENST00000435050 KRT15P19012 456 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 GJA5P36382 358 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 TAS2R40P59535 323 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 RBP5P82980 135 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 GPS1Q13098 491 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 BSPRYQ5W0U4 402 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 ZC3H18Q86VM9 953 aaKnown RBP12.86□□□□□ -0.35
CLDN4-203ENST00000435050 CAVIN3Q969G5 261 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 TINF2Q9BSI4 451 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.86□□□□□ -0.35
CLDN4-203ENST00000435050 PPFIA4O75335 1185 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 ATG7O95352 703 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 SEC24CP53992 1094 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 FAM182AQ5T1J6 154 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 IZUMO3Q5VZ72 239 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 EFCAB13Q8IY85 973 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 RBM41Q96IZ5 413 aaKnown RBP12.86□□□□□ -0.35
CLDN4-203ENST00000435050 SEMA4AQ9H3S1 761 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 PRPSAP2O60256 369 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 CNMDO75829 334 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 IL18RAPO95256 599 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 IRX5P78411 483 aaPredicted RBP12.86□□□□□ -0.35
CLDN4-203ENST00000435050 RUBCNQ92622 972 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 DNAI2Q9GZS0 605 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 VTA1Q9NP79 307 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 PDLIM7Q9NR12 457 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 STXBP5LQ9Y2K9 1186 aa12.86□□□□□ -0.35
CLDN4-203ENST00000435050 HMGB1P1B2RPK0 211 aaPredicted RBP12.85□□□□□ -0.35
CLDN4-203ENST00000435050 SLC8A3P57103 927 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 MAMLD1Q13495 774 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 KYNUQ16719 465 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 TTMPQ5BVD1 217 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 BEST2Q8NFU1 509 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 PWWP2AQ96N64 755 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 ABHD16BQ9H3Z7 469 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 SPC25Q9HBM1 224 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 SAYSD1Q9NPB0 183 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 SAE1Q9UBE0 346 aaPredicted RBP12.85□□□□□ -0.35
CLDN4-203ENST00000435050 AGPSO00116 658 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 CES2O00748 559 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 STRNO43815 780 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 LCP1P13796 627 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 PDGFRAP16234 1089 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 ARSEP51690 589 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 ITGA8P53708 1063 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 LONRF1Q17RB8 773 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.85□□□□□ -0.35
CLDN4-203ENST00000435050 CCDC33Q8N5R6 958 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 STRIP2Q9ULQ0 834 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 KCNH4Q9UQ05 1017 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 INPP5FQ9Y2H2 1132 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 IKBKGQ9Y6K9 419 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 PTPN11Q06124 597 aaPredicted RBP12.85□□□□□ -0.35
CLDN4-203ENST00000435050 GNASQ5JWF2 1037 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 FOXR1Q6PIV2 292 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 MICALL1Q8N3F8 863 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 OTUD6BQ8N6M0 293 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 ATL2Q8NHH9 583 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 MDM1Q8TC05 714 aa12.85□□□□□ -0.35
CLDN4-203ENST00000435050 STMN4Q9H169 189 aaPredicted RBP12.85□□□□□ -0.35
CLDN4-203ENST00000435050 IRAK1P51617 712 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 NDST1P52848 882 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 CDH6P55285 790 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 SLMAPQ14BN4 828 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 TARBP2Q15633 366 aaKnown RBP12.84□□□□□ -0.35
CLDN4-203ENST00000435050 P3H1Q32P28 736 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 C1orf228Q6PIY5 440 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 RUNDC3BQ96NL0 473 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 MAN1A1P33908 653 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 LRRC14Q15048 493 aa12.84□□□□□ -0.35
CLDN4-203ENST00000435050 DARS2Q6PI48 645 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms