RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 GSPT2Q8IYD1 628 aaKnown RBP11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 REM2Q8IYK8 340 aaPredicted RBP11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 MMGT1Q8N4V1 131 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 WDTC1Q8N5D0 677 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 LPPQ93052 612 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 TMEM176AQ96HP8 235 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 AGO3Q9H9G7 860 aaKnown RBP11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 RNF14Q9UBS8 474 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 TJP2Q9UDY2 1190 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 DMGDHQ9UI17 866 aaKnown RBP11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 HCRTO43612 131 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 GHRP10912 638 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 ITGA4P13612 1032 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 PTPN11Q06124 597 aaPredicted RBP11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 SOX4Q06945 474 aaPredicted RBP11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 PTP4A2Q12974 167 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 ITGA7Q13683 1181 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 TCEAL1Q15170 157 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 ZBTB6Q15916 424 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 C9orf57Q5W0N0 161 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 RNF180Q86T96 592 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 PHF13Q86YI8 300 aaPredicted RBP11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 C12orf29Q8N999 325 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 PCSK9Q8NBP7 692 aaKnown RBP11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 ZNF784Q8NCA9 323 aaPredicted RBP11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 RNF169Q8NCN4 708 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 TMEM35BQ8NCS4 154 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 ZNF296Q8WUU4 475 aaPredicted RBP11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 TRIM11Q96F44 468 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 RNPC3Q96LT9 517 aaKnown RBP11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 MRPL45Q9BRJ2 306 aaKnown RBP11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 SENP6Q9GZR1 1112 aaPredicted RBP11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 CNTN3Q9P232 1028 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 USTQ9Y2C2 406 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 CEP83Q9Y592 693 aa11.34□□□□□ -0.59
SMPD4P1-201ENST00000416717 MYO1FO00160 1098 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 PIK3R2O00459 728 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 KRIT1O00522 736 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 INHAP05111 366 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 MYBL1P10243 752 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 MMP8P22894 467 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 CD52P31358 61 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 SSR1P43307 286 aaKnown RBP11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 AFF1P51825 1210 aaKnown RBP11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 ACLYP53396 1101 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 RPL7AP62424 266 aaKnown RBP11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 MAMLD1Q13495 774 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 LONRF2Q1L5Z9 754 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 CCDC70Q6NSX1 233 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 UBL4BQ8N7F7 174 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 UBA3Q8TBC4 463 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 ACTRT1Q8TDG2 376 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 GDAP1L1Q96MZ0 367 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 LPIN3Q9BQK8 851 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 VRTNQ9H8Y1 702 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 ARFGAP3Q9NP61 516 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 AVENQ9NQS1 362 aaPredicted RBP11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 PRDM10Q9NQV6 1147 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 CYTH4Q9UIA0 394 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 RAB21Q9UL25 225 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 UBQLN1Q9UMX0 589 aaKnown RBP11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 DERAQ9Y315 318 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 CCDC151A5D8V7 595 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 ZSCAN5CA6NGD5 496 aaPredicted RBP11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 GOLGA8SH3BPF8 625 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 CES2O00748 559 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 GJC1P36383 396 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 BRD3Q15059 726 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 MAP3K21Q5TCX8 1036 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 MTERF4Q7Z6M4 381 aaKnown RBP11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 ACOT1Q86TX2 421 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 ERICH1Q86X53 443 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 RPS6KC1Q96S38 1066 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 DDX47Q9H0S4 455 aaKnown RBP11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 CYP3A43Q9HB55 503 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 BARX2Q9UMQ3 279 aaPredicted RBP11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 NR2E1Q9Y466 385 aa11.33□□□□□ -0.6
SMPD4P1-201ENST00000416717 M0QYV0 167 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 SPTLC1O15269 473 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 MED7O43513 233 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 MICAL2O94851 1124 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 PAEPP09466 180 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 PYGMP11217 842 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 MAP2K2P36507 400 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 MLH1P40692 756 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 NKX3-2P78367 333 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 ITIH3Q06033 890 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 PTPN20Q4JDL3 420 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 ZNF618Q5T7W0 954 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 OR6B3Q8NGW1 331 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 CD101Q93033 1021 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 MCEEQ96PE7 176 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 WNT8AQ9H1J5 351 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 FAM49BQ9NUQ9 324 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 FAM105AQ9NUU6 356 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 PCDHGC3Q9UN70 934 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 NME7Q9Y5B8 376 aa11.32□□□□□ -0.6
SMPD4P1-201ENST00000416717 FRMPD3Q5JV73 1810 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms