RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 FUKQ8N0W3 1084 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 EIF1ADQ8N9N8 165 aaKnown RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 RPF1Q9H9Y2 349 aaKnown RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 JPH1Q9HDC5 661 aaPredicted RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 ZFP69BQ9UJL9 534 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 DNPEPQ9ULA0 475 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 DUOX1Q9NRD9 1551 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 PIAS1O75925 651 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 TJP3O95049 919 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 VNN1O95497 513 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 ARFIP2P53365 341 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 SNRPFP62306 86 aaKnown RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 OTUD4Q01804 1114 aaKnown RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 CAV1Q03135 178 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 SPRED3Q2MJR0 410 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 FAM71AQ8IYT1 594 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 VPS52Q8N1B4 723 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 C7orf31Q8N865 590 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 AGBL3Q8NEM8 1001 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 ZBTB10Q96DT7 871 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 XAB2Q9HCS7 855 aaKnown RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 WNT10BO00744 389 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 DNAJC8O75937 253 aaPredicted RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 KITP10721 976 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 ADORA2BP29275 332 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 EIF3EP60228 445 aaKnown RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 BMPR2Q13873 1038 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 SPARCL1Q14515 664 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 KCTD2Q14681 263 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 LY6KQ17RY6 165 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 CRYGNQ8WXF5 182 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 KCNG1Q9UIX4 513 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 GRAP2O75791 330 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 CPP00450 1065 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 CETPP11597 493 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 CAPSQ13938 189 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 EAPPQ56P03 285 aaPredicted RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 ANKRD20A3Q5VUR7 823 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 EEF1DP3Q658K8 133 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 SLC39A4Q6P5W5 647 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 SUGP1Q8IWZ8 645 aaKnown RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 FAM71DQ8N9W8 422 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 PPFIBP2Q8ND30 876 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 TMEM121Q9BTD3 319 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 A1CFQ9NQ94 594 aaKnown RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 AKT3Q9Y243 479 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 MROH7Q68CQ1 1323 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 E2F8A0AVK6 867 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 C5orf60A6NFR6 353 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 SNX3O60493 162 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 TTC4O95801 387 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 CDC25CP30307 473 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 CPA2P48052 419 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 RCN2Q14257 317 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 LACTB2Q53H82 288 aaPredicted RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 CEP128Q6ZU80 1094 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 GLIS1Q8NBF1 620 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 C3orf20Q8ND61 904 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 OR6B3Q8NGW1 331 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 OTUD5Q96G74 571 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 CDHR1Q96JP9 859 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 TRAIPQ9BWF2 469 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 MTFR1LQ9H019 292 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 DDX56Q9NY93 547 aaKnown RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 HAO1Q9UJM8 370 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 CFAP69A5D8W1 941 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 B4GALT5O43286 388 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 LYPLA2O95372 231 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 CYP1A1P04798 512 aaPredicted RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 VASPP50552 380 aaPredicted RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 NCALDP61601 193 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 CNTN2Q02246 1040 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 ITIH4Q14624 930 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 SCARA3Q6AZY7 606 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 MCUR1Q96AQ8 359 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 WNK4Q96J92 1243 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 FAM81BQ96LP2 452 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 PDGFDQ9GZP0 370 aaPredicted RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 LRRC19Q9H756 370 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 NGRNQ9NPE2 291 aaKnown RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 UBN1Q9NPG3 1134 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 HOXC10Q9NYD6 342 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 PCYOX1Q9UHG3 505 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 CEP350Q5VT06 3117 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 BAG2O95816 211 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 INHBAP08476 426 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 CLCN3P51790 818 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 CDH8P55286 799 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 TGFB2P61812 414 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 TDRD10Q5VZ19 366 aaKnown RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 DENND1BQ6P3S1 775 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 C6orf89Q6UWU4 347 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 ZNF280CQ8ND82 737 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 RDM1Q8NG50 284 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 LPAR1Q92633 364 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 STAMBPL1Q96FJ0 436 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 SYT11Q9BT88 431 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 MTMR12Q9C0I1 747 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 NOP53Q9NZM5 478 aaKnown RBP5.19□□□□□ -1.58
SMAD4-202ENST00000398417 L3MBTL1Q9Y468 752 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms