RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 ELNP15502 786 aa18.25■□□□□ 0.51
SCNN1A-205ENST00000396966 NOMO3P69849 1222 aa18.25■□□□□ 0.51
SCNN1A-205ENST00000396966 SKIDA1Q1XH10 827 aa18.25■□□□□ 0.51
SCNN1A-205ENST00000396966 ZNF394Q53GI3 561 aa18.25■□□□□ 0.51
SCNN1A-205ENST00000396966 CXorf38Q8TB03 319 aa18.25■□□□□ 0.51
SCNN1A-205ENST00000396966 HPDLQ96IR7 371 aa18.25■□□□□ 0.51
SCNN1A-205ENST00000396966 SNX27Q96L92 541 aa18.25■□□□□ 0.51
SCNN1A-205ENST00000396966 AVENQ9NQS1 362 aaPredicted RBP18.25■□□□□ 0.51
SCNN1A-205ENST00000396966 ALG6Q9Y672 507 aa18.25■□□□□ 0.51
SCNN1A-205ENST00000396966 GOLGA8KD6RF30 607 aa18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 RPS6KA5O75582 802 aa18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 TRPA1O75762 1119 aa18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 STAU1O95793 577 aaKnown RBP18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 RPLP2P05387 115 aaKnown RBP18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 IVLP07476 585 aa18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 MRPS6P82932 125 aaKnown RBP18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 CAP1Q01518 475 aa18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 MESDQ14696 234 aa18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 DNAJC21Q5F1R6 531 aaKnown RBP18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 LIN9Q5TKA1 542 aa18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 PASD1Q8IV76 773 aa18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 VCPIP1Q96JH7 1222 aa18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 CYP3A43Q9HB55 503 aa18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 KRIT1O00522 736 aa18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 MYCNP04198 464 aaPredicted RBP18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 ASGR1P07306 291 aa18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 APLP1P51693 650 aa18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 TTMPQ5BVD1 217 aa18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 CFAP58Q5T655 872 aa18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 GDF6Q6KF10 455 aaPredicted RBP18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 RPS6KC1Q96S38 1066 aa18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 DDX47Q9H0S4 455 aaKnown RBP18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 TRPV2Q9Y5S1 764 aa18.24■□□□□ 0.51
SCNN1A-205ENST00000396966 TMEM110-MUSTN1A8MSY1 372 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 MIF4GDA9UHW6 222 aaKnown RBP18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 SART1O43290 800 aaKnown RBP18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 HMGCRP04035 888 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 ITGA4P13612 1032 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 MYO1EQ12965 1108 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 HLTFQ14527 1009 aaKnown RBP eCLIP18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 BEST2Q8NFU1 509 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 CD99L2Q8TCZ2 262 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 HES2Q9Y543 173 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 THSD7BQ9C0I4 1608 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 MED7O43513 233 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 LSM8O95777 96 aaKnown RBP18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 CFHP08603 1231 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 BRD2P25440 801 aaKnown RBP18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 RAP1GAPP47736 663 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 KCNA10Q16322 511 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 KCTD16Q68DU8 428 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 MON1BQ7L1V2 547 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 DDX42Q86XP3 938 aaKnown RBP eCLIP18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 PHF13Q86YI8 300 aaPredicted RBP18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 IQCKQ8N0W5 287 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 UBL4BQ8N7F7 174 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 PCSK9Q8NBP7 692 aaKnown RBP18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 KLHDC9Q8NEP7 349 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 NXF3Q9H4D5 531 aaKnown RBP18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 FAM124BQ9H5Z6 455 aaPredicted RBP18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 ADAM22Q9P0K1 906 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 CHORDC1Q9UHD1 332 aaPredicted RBP18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 CEP83Q9Y592 693 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 CDY2AQ9Y6F7 541 aa18.23■□□□□ 0.51
SCNN1A-205ENST00000396966 RECQL4O94761 1208 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 PAEPP09466 180 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 CST5P28325 142 aaPredicted RBP18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 SSTR3P32745 418 aaPredicted RBP18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 RASGEF1CQ8N431 466 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 TTC39CQ8N584 583 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 TMEM35BQ8NCS4 154 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 TSPAN18Q96SJ8 248 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 APOL6Q9BWW8 343 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 ZNF518BQ9C0D4 1074 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 CNTN3Q9P232 1028 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 PCDHGC3Q9UN70 934 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 SCN1AP35498 2009 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 DDX3YO15523 660 aaKnown RBP18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 CDH8P55286 799 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 C1QBPQ07021 282 aaKnown RBP18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 TTC19Q6DKK2 380 aaPredicted RBP18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 ALKAL1Q6UXT8 129 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 SESTD1Q86VW0 696 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 RAET1EQ8TD07 263 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 PIK3R5Q8WYR1 880 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 C11orf70Q9BRQ4 267 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 SMYD3Q9H7B4 428 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 MRPL47Q9HD33 250 aaKnown RBP18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 AMACRQ9UHK6 382 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 RSPH14Q9UHP6 348 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 LCMT1Q9UIC8 334 aa18.22■□□□□ 0.51
SCNN1A-205ENST00000396966 TLR3O15455 904 aaKnown RBP18.21■□□□□ 0.51
SCNN1A-205ENST00000396966 XPOTO43592 962 aaKnown RBP18.21■□□□□ 0.51
SCNN1A-205ENST00000396966 RRM1P23921 792 aa18.21■□□□□ 0.51
SCNN1A-205ENST00000396966 MAP2K2P36507 400 aa18.21■□□□□ 0.51
SCNN1A-205ENST00000396966 DCAF12L1Q5VU92 463 aa18.21■□□□□ 0.51
SCNN1A-205ENST00000396966 SERINC5Q86VE9 423 aa18.21■□□□□ 0.51
SCNN1A-205ENST00000396966 FAM228AQ86W67 206 aa18.21■□□□□ 0.51
SCNN1A-205ENST00000396966 TMEM130Q8N3G9 435 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms