RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 KIF4AO95239 1232 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 LCA5LO95447 670 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 ACRP10323 421 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 ITGB8P26012 769 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 MAGEA1P43355 309 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 LHX1P48742 406 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 VAV2P52735 878 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 NDST1P52848 882 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 CDH8P55286 799 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 WDR5P61964 334 aaKnown RBP16.42■□□□□ 0.22
VAMP1-202ENST00000396308 KIF5AQ12840 1032 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 CCDC122Q5T0U0 273 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 SCARA3Q6AZY7 606 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.42■□□□□ 0.22
VAMP1-202ENST00000396308 TMEM130Q8N3G9 435 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 SLC20A1Q8WUM9 679 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 DPF3Q92784 378 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 SENP8Q96LD8 212 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 SDCBP2Q9H190 292 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 KCND1Q9NSA2 647 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 TRMT1Q9NXH9 659 aaKnown RBP16.42■□□□□ 0.22
VAMP1-202ENST00000396308 PCDHA13Q9Y5I0 950 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 DNAH12Q6ZR08 3092 aa16.42■□□□□ 0.22
VAMP1-202ENST00000396308 A0A087X0T9 212 aa16.41■□□□□ 0.22
VAMP1-202ENST00000396308 SPTLC1O15269 473 aa16.41■□□□□ 0.22
VAMP1-202ENST00000396308 FAM228BP0C875 321 aa16.41■□□□□ 0.22
VAMP1-202ENST00000396308 VDRP11473 427 aa16.41■□□□□ 0.22
VAMP1-202ENST00000396308 WARSP23381 471 aaKnown RBP16.41■□□□□ 0.22
VAMP1-202ENST00000396308 GNL1P36915 607 aaPredicted RBP16.41■□□□□ 0.22
VAMP1-202ENST00000396308 RAD23BP54727 409 aa16.41■□□□□ 0.22
VAMP1-202ENST00000396308 ELAVL2Q12926 359 aaKnown RBP16.41■□□□□ 0.22
VAMP1-202ENST00000396308 SOWAHAQ2M3V2 549 aa16.41■□□□□ 0.22
VAMP1-202ENST00000396308 ASTE1Q2TB18 679 aaPredicted RBP16.41■□□□□ 0.22
VAMP1-202ENST00000396308 PAN2Q504Q3 1202 aaKnown RBP16.41■□□□□ 0.22
VAMP1-202ENST00000396308 SGO2Q562F6 1265 aa16.41■□□□□ 0.22
VAMP1-202ENST00000396308 SPOUT1Q5T280 376 aaKnown RBP16.41■□□□□ 0.22
VAMP1-202ENST00000396308 ALKBH5Q6P6C2 394 aaKnown RBP16.41■□□□□ 0.22
VAMP1-202ENST00000396308 COLGALT2Q8IYK4 626 aa16.41■□□□□ 0.22
VAMP1-202ENST00000396308 MSANTD4Q8NCY6 345 aa16.41■□□□□ 0.22
VAMP1-202ENST00000396308 TOP1MTQ969P6 601 aa16.41■□□□□ 0.22
VAMP1-202ENST00000396308 TRIM11Q96F44 468 aa16.41■□□□□ 0.22
VAMP1-202ENST00000396308 PPP1R13BQ96KQ4 1090 aa16.41■□□□□ 0.22
VAMP1-202ENST00000396308 HEXIM2Q96MH2 286 aaKnown RBP16.41■□□□□ 0.22
VAMP1-202ENST00000396308 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.41■□□□□ 0.22
VAMP1-202ENST00000396308 NAGPAQ9UK23 515 aa16.41■□□□□ 0.22
VAMP1-202ENST00000396308 L1RE1Q9UN81 338 aa16.41■□□□□ 0.22
VAMP1-202ENST00000396308 FAN1Q9Y2M0 1017 aa16.41■□□□□ 0.22
VAMP1-202ENST00000396308 KIF2AO00139 706 aaPredicted RBP16.4■□□□□ 0.22
VAMP1-202ENST00000396308 TADA2AO75478 443 aa16.4■□□□□ 0.22
VAMP1-202ENST00000396308 DGKIO75912 1065 aa16.4■□□□□ 0.22
VAMP1-202ENST00000396308 DDHD2O94830 711 aa16.4■□□□□ 0.22
VAMP1-202ENST00000396308 LSM8O95777 96 aaKnown RBP16.4■□□□□ 0.22
VAMP1-202ENST00000396308 ALDH2P05091 517 aa16.4■□□□□ 0.22
VAMP1-202ENST00000396308 MMEP08473 750 aa16.4■□□□□ 0.22
VAMP1-202ENST00000396308 PCSK1P29120 753 aa16.4■□□□□ 0.22
VAMP1-202ENST00000396308 AARSP49588 968 aaKnown RBP eCLIP16.4■□□□□ 0.22
VAMP1-202ENST00000396308 CYP27A1Q02318 531 aa16.4■□□□□ 0.22
VAMP1-202ENST00000396308 OTOP2Q7RTS6 562 aa16.4■□□□□ 0.22
VAMP1-202ENST00000396308 ZNF280BQ86YH2 543 aa16.4■□□□□ 0.22
VAMP1-202ENST00000396308 CMTR2Q8IYT2 770 aaKnown RBP16.4■□□□□ 0.22
VAMP1-202ENST00000396308 THEM5Q8N1Q8 247 aa16.4■□□□□ 0.22
VAMP1-202ENST00000396308 PDCL2Q8N4E4 241 aa16.4■□□□□ 0.22
VAMP1-202ENST00000396308 SUSD3Q96L08 255 aa16.4■□□□□ 0.22
VAMP1-202ENST00000396308 YME1L1Q96TA2 773 aa16.4■□□□□ 0.22
VAMP1-202ENST00000396308 MRPL45Q9BRJ2 306 aaKnown RBP16.4■□□□□ 0.22
VAMP1-202ENST00000396308 CACNG4Q9UBN1 327 aa16.4■□□□□ 0.22
VAMP1-202ENST00000396308 INTUQ9ULD6 942 aa16.4■□□□□ 0.22
VAMP1-202ENST00000396308 PRG3Q9Y2Y8 225 aaPredicted RBP16.4■□□□□ 0.22
VAMP1-202ENST00000396308 NR2E3Q9Y5X4 410 aa16.4■□□□□ 0.22
VAMP1-202ENST00000396308 SF3B1O75533 1304 aaKnown RBP eCLIP16.4■□□□□ 0.22
VAMP1-202ENST00000396308 PTPRSQ13332 1948 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 DDX3XO00571 662 aaKnown RBP eCLIP16.39■□□□□ 0.21
VAMP1-202ENST00000396308 ZNF500O60304 480 aaPredicted RBP16.39■□□□□ 0.21
VAMP1-202ENST00000396308 RTN2O75298 545 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 H2AFZP0C0S5 128 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 GZMAP12544 262 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 TYMPP19971 482 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 BRD2P25440 801 aaKnown RBP16.39■□□□□ 0.21
VAMP1-202ENST00000396308 NSFP46459 744 aaKnown RBP16.39■□□□□ 0.21
VAMP1-202ENST00000396308 ALDH7A1P49419 539 aaKnown RBP16.39■□□□□ 0.21
VAMP1-202ENST00000396308 GATMP50440 423 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 FMO1Q01740 532 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 BTG3Q14201 252 aaPredicted RBP16.39■□□□□ 0.21
VAMP1-202ENST00000396308 H2AFVQ71UI9 128 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 CRIPAKQ8N1N5 446 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 SLC4A11Q8NBS3 891 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 TMEM35BQ8NCS4 154 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 C3orf58Q8NDZ4 430 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 LNX1Q8TBB1 728 aaPredicted RBP16.39■□□□□ 0.21
VAMP1-202ENST00000396308 HASPINQ8TF76 798 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 ZNF606Q8WXB4 792 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 CTNNBL1Q8WYA6 563 aaPredicted RBP16.39■□□□□ 0.21
VAMP1-202ENST00000396308 RABGGTAQ92696 567 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 NOX5Q96PH1 765 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 SLC9A7Q96T83 725 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 PAAF1Q9BRP4 392 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 SYT11Q9BT88 431 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 ZBED2Q9BTP6 218 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 ELOVL4Q9GZR5 314 aa16.39■□□□□ 0.21
VAMP1-202ENST00000396308 NRDE2Q9H7Z3 1164 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms