RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 ETAA1Q9NY74 926 aa3.44□□□□□ -1.86
RNU6-1040P-201ENST00000383974 DKK3Q9UBP4 350 aa3.44□□□□□ -1.86
RNU6-1040P-201ENST00000383974 SPATA31A3Q5VYP0 1347 aa3.44□□□□□ -1.86
RNU6-1040P-201ENST00000383974 CCDC154A6NI56 674 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 ZNF785A8K8V0 405 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 F2RL2O00254 374 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 IKBKBO14920 756 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 TRIAP1O43715 76 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 MT-CO1P00395 513 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 ZFXP17010 805 aaPredicted RBP3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 KELP23276 732 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 PSMC1P62191 440 aaKnown RBP3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 TUBA4AP68366 448 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 INAVAQ3KP66 663 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 CCDC93Q567U6 631 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 RBM20Q5T481 1227 aaKnown RBP3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 SDE2Q6IQ49 451 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 PGM2L1Q6PCE3 622 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 NEK8Q86SG6 692 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 CBARPQ8N350 705 aaPredicted RBP3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 PSD4Q8NDX1 1056 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 C1orf162Q8NEQ5 155 aaPredicted RBP3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 SCAMP4Q969E2 229 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 RPL36ALQ969Q0 106 aaKnown RBP3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 EHD3Q9NZN3 535 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 CALCOCO1Q9P1Z2 691 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 PCDHB1Q9Y5F3 818 aa3.43□□□□□ -1.86
RNU6-1040P-201ENST00000383974 PHLDB1Q86UU1 1377 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 IGKV2-30P06310 120 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 NHLRC4P0CG21 123 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 JUPP14923 745 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 CHRM3P20309 590 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 MPGP29372 298 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 PTGER1P34995 402 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 ZNF135P52742 658 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 KIF23Q02241 960 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 TBCCQ15814 346 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 PROSER3Q2NL68 480 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 PLAC9Q5JTB6 97 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 MORN5Q5VZ52 161 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 PPP4R3AQ6IN85 833 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 TAF2Q6P1X5 1199 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 GIMAP6Q6P9H5 292 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 YTHDF3Q7Z739 585 aaKnown RBP3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 PDSS2Q86YH6 399 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 KLHDC4Q8TBB5 520 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 REPS1Q96D71 796 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 FCRL4Q96PJ5 515 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 VRK1Q99986 396 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 KRTAP1-5Q9BYS1 174 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 SEMA4CQ9C0C4 833 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 AMBRA1Q9C0C7 1298 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 BRD9Q9H8M2 597 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 NRIP3Q9NQ35 241 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 SERTAD4Q9NUC0 356 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 MKS1Q9NXB0 559 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 SH3BP4Q9P0V3 963 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 BTBD3Q9Y2F9 522 aa3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 TMA7Q9Y2S6 64 aaKnown RBP3.42□□□□□ -1.86
RNU6-1040P-201ENST00000383974 TISP43B9A030 160 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 NT5C1B-RDH14C9J2C7 533 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 ZNF213O14771 459 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 KCNAB3O43448 404 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 XPOTO43592 962 aaKnown RBP3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 PCDHGA12O60330 932 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 BMP15O95972 392 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 GJB1P08034 283 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 PDHA1P08559 390 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 GNAI3P08754 354 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 NDUFB7P17568 137 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 ITGALP20701 1170 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 MALP21145 153 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 GNAI1P63096 354 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 BMPR2Q13873 1038 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 SUPT20HL1Q3ZLR7 823 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 SLC44A4Q53GD3 710 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 VPS53Q5VIR6 699 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 CEP85Q6P2H3 762 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 SLC4A10Q6U841 1118 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 ZNF551Q7Z340 670 aaPredicted RBP3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 FAM109AQ8N4B1 249 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 NSUN6Q8TEA1 469 aaKnown RBP3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 COA7Q96BR5 231 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 FAM136AQ96C01 138 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 CNPPD1Q9BV87 410 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 SERHLQ9NQF3 203 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 RLIMQ9NVW2 624 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 SIDT1Q9NXL6 827 aaKnown RBP3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 SLC5A4Q9NY91 659 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 SERPINB13Q9UIV8 391 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 PCDHGA9Q9Y5G4 932 aaKnown RBP3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 PCDHGA8Q9Y5G5 932 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 PCDHGA7Q9Y5G6 932 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 PCDHGA6Q9Y5G7 932 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 PCDHGA3Q9Y5H0 932 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 ZNF521Q96K83 1311 aa3.41□□□□□ -1.86
RNU6-1040P-201ENST00000383974 KLHL33A6NCF5 533 aa3.4□□□□□ -1.87
RNU6-1040P-201ENST00000383974 SMIM22K7EJ46 135 aa3.4□□□□□ -1.87
RNU6-1040P-201ENST00000383974 VPS4BO75351 444 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms