RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 CHST7Q9NS84 486 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 TTC7AQ9ULT0 858 aaPredicted RBP18.06■□□□□ 0.48
VEGFA-205ENST00000372067 ZNF286BP0CG31 522 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 KRT10P13645 584 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 CELF3Q5SZQ8 465 aaKnown RBP18.06■□□□□ 0.48
VEGFA-205ENST00000372067 B4GALNT4Q76KP1 1039 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 BRSK2Q8IWQ3 736 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 NSMCE1Q8WV22 266 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 MAIP1Q8WWC4 291 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 CPB2Q96IY4 423 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 POLIQ9UNA4 740 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 SCINQ9Y6U3 715 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 DNM1LO00429 736 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 EDN1P05305 212 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 CDH8P55286 799 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 LAMB3Q13751 1172 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 UAP1Q16222 522 aaPredicted RBP18.06■□□□□ 0.48
VEGFA-205ENST00000372067 OLIG1Q8TAK6 271 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.06■□□□□ 0.483e-7■■■■■ 46.3
VEGFA-205ENST00000372067 GPR20Q99678 358 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 NIFKQ9BYG3 293 aaKnown RBP18.06■□□□□ 0.48
VEGFA-205ENST00000372067 NIF3L1Q9GZT8 377 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 CHCHD3Q9NX63 227 aaKnown RBP18.06■□□□□ 0.48
VEGFA-205ENST00000372067 RBPJLQ9UBG7 517 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 ANAPC5Q9UJX4 755 aa18.06■□□□□ 0.48
VEGFA-205ENST00000372067 CXCL11O14625 94 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 IFNAR2P48551 515 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 PLCB4Q15147 1175 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 ATP13A4Q4VNC1 1196 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 SCARA3Q6AZY7 606 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 STAMBPL1Q96FJ0 436 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 SEMA4AQ9H3S1 761 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 TMBIM4Q9HC24 238 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 HHATQ5VTY9 493 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 CYP4F22Q6NT55 531 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 TRIM72Q6ZMU5 477 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 ZNF677Q86XU0 584 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 TBC1D31Q96DN5 1066 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 HOMER3Q9NSC5 361 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 BLOC1S6Q9UL45 172 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 MYH9P35579 1960 aaKnown RBP18.05■□□□□ 0.48
VEGFA-205ENST00000372067 A0A087WZ62 844 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 INSRRP14616 1297 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 CCNA1P78396 465 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 SGSM1Q2NKQ1 1148 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 DDX1Q92499 740 aaKnown RBP18.05■□□□□ 0.48
VEGFA-205ENST00000372067 FDXACB1Q9BRP7 624 aaPredicted RBP18.05■□□□□ 0.48
VEGFA-205ENST00000372067 PARVAQ9NVD7 372 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 PCSK1NQ9UHG2 260 aa18.05■□□□□ 0.48
VEGFA-205ENST00000372067 O00370 1275 aa18.04■□□□□ 0.48
VEGFA-205ENST00000372067 LINGO3P0C6S8 592 aa18.04■□□□□ 0.48
VEGFA-205ENST00000372067 PEX5P50542 639 aa18.04■□□□□ 0.48
VEGFA-205ENST00000372067 IFT88Q13099 833 aa18.04■□□□□ 0.48
VEGFA-205ENST00000372067 PRUNE1Q86TP1 453 aa18.04■□□□□ 0.48
VEGFA-205ENST00000372067 MREGQ8N565 214 aa18.04■□□□□ 0.48
VEGFA-205ENST00000372067 AFG1LQ8WV93 481 aa18.04■□□□□ 0.48
VEGFA-205ENST00000372067 ZSCAN9O15535 394 aaPredicted RBP18.04■□□□□ 0.48
VEGFA-205ENST00000372067 HBP1O60381 514 aa18.04■□□□□ 0.48
VEGFA-205ENST00000372067 SHBGP04278 402 aa18.04■□□□□ 0.48
VEGFA-205ENST00000372067 PHKA2P46019 1235 aa18.04■□□□□ 0.48
VEGFA-205ENST00000372067 DUPD1Q68J44 220 aa18.04■□□□□ 0.48
VEGFA-205ENST00000372067 FEZF2Q8TBJ5 459 aa18.04■□□□□ 0.48
VEGFA-205ENST00000372067 MDM1Q8TC05 714 aa18.04■□□□□ 0.48
VEGFA-205ENST00000372067 HEXIM2Q96MH2 286 aaKnown RBP18.04■□□□□ 0.48
VEGFA-205ENST00000372067 ACO2Q99798 780 aaKnown RBP18.04■□□□□ 0.48
VEGFA-205ENST00000372067 OSBPL8Q9BZF1 889 aa18.04■□□□□ 0.48
VEGFA-205ENST00000372067 TMEM134Q9H6X4 195 aa18.04■□□□□ 0.48
VEGFA-205ENST00000372067 TBK1Q9UHD2 729 aa18.04■□□□□ 0.48
VEGFA-205ENST00000372067 PMM2O15305 246 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 MAP3K13O43283 966 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 PROSCO94903 275 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 PSMA2P25787 234 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 LSP1P33241 339 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 RPL7AP62424 266 aaKnown RBP18.03■□□□□ 0.48
VEGFA-205ENST00000372067 SNAPC2Q13487 334 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 MPZL3Q6UWV2 235 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 LRIG3Q6UXM1 1119 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 ZPBP2Q6X784 338 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 TMEM130Q8N3G9 435 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 GRK7Q8WTQ7 553 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 TMEM165Q9HC07 324 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 RNF19AQ9NV58 838 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 ERAP1Q9NZ08 941 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 SLC1A1P43005 524 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 RANBP1P43487 201 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 TAS2R40P59535 323 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 SURF1Q15526 300 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 SMTNL2Q2TAL5 461 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 MAP1SQ66K74 1059 aaPredicted RBP18.03■□□□□ 0.48
VEGFA-205ENST00000372067 ARMCX2Q7L311 632 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 SPATA21Q7Z572 469 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 ANKRD42Q8N9B4 389 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 B4GALNT2Q8NHY0 566 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 RNPEPQ9H4A4 650 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 ATAD5Q96QE3 1844 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 A0A0G2JLL6 359 aaPredicted RBP18.03■□□□□ 0.48
VEGFA-205ENST00000372067 ASB14A6NK59 587 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 ITGB3P05106 788 aa18.03■□□□□ 0.48
VEGFA-205ENST00000372067 MDH1P40925 334 aaKnown RBP18.03■□□□□ 0.48
VEGFA-205ENST00000372067 NOMO3P69849 1222 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms