RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 GIT1Q9Y2X7 761 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 PCDHA2Q9Y5H9 948 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 ARVCFO00192 962 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 FOXP2O15409 715 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 DARSP14868 501 aaKnown RBP9.76□□□□□ -0.85
PTPRE-202ENST00000306042 MAP3K7CLP57077 242 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 MDM2Q00987 491 aaPredicted RBP9.76□□□□□ -0.85
PTPRE-202ENST00000306042 AP1B1Q10567 949 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 EPC2Q52LR7 807 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 KLHDC7AQ5VTJ3 777 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 PPP1R13BQ96KQ4 1090 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 MCEEQ96PE7 176 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 PCDHB8Q9UN66 801 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 PALMO75781 387 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 AKAP3O75969 853 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 ACAT1P24752 427 aaKnown RBP9.76□□□□□ -0.85
PTPRE-202ENST00000306042 RAP1GAPP47736 663 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 NDUFV1P49821 464 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 USP41Q3LFD5 358 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 PSRC1Q6PGN9 363 aaPredicted RBP9.76□□□□□ -0.85
PTPRE-202ENST00000306042 AFAP1L1Q8TED9 768 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 SENP8Q96LD8 212 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 FBXL21Q9UKT6 434 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 Q9Y3F1 56 aa9.76□□□□□ -0.85
PTPRE-202ENST00000306042 SYN1P17600 705 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 LAG3P18627 525 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 PDE1BQ01064 536 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 MLLT1Q03111 559 aaPredicted RBP9.75□□□□□ -0.85
PTPRE-202ENST00000306042 ITPRIPL1Q6GPH6 555 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 RABGGTAQ92696 567 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 ZBTB9Q96C00 473 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 PLCB1Q9NQ66 1216 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 CISHQ9NSE2 258 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 RNF19AQ9NV58 838 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 DDIT4Q9NX09 232 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 IPPQ9Y573 584 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 C4AP0C0L4 1744 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 LYPLA2O95372 231 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 S100BP04271 92 aaPredicted RBP9.75□□□□□ -0.85
PTPRE-202ENST00000306042 TRIM65Q6PJ69 517 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 TMEM176AQ96HP8 235 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 UXTQ9UBK9 157 aaPredicted RBP9.75□□□□□ -0.85
PTPRE-202ENST00000306042 A0A1B0GTH6 734 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 H0Y626 953 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 PPP1R12AO14974 1030 aaPredicted RBP9.75□□□□□ -0.85
PTPRE-202ENST00000306042 LGR5O75473 907 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 FGGP02679 453 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 GUCY2FP51841 1108 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 TRIP13Q15645 432 aaPredicted RBP9.75□□□□□ -0.85
PTPRE-202ENST00000306042 ANO4Q32M45 955 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 SLC39A12Q504Y0 691 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 CENPPQ6IPU0 288 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 HDXQ7Z353 690 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 TMEM86AQ8N2M4 240 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 C1orf131Q8NDD1 294 aaKnown RBP9.75□□□□□ -0.85
PTPRE-202ENST00000306042 MORC4Q8TE76 937 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 PPP4R1Q8TF05 950 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 CDT1Q9H211 546 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 FBXO44Q9H4M3 255 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 TLR8Q9NR97 1041 aaKnown RBP9.75□□□□□ -0.85
PTPRE-202ENST00000306042 UVRAGQ9P2Y5 699 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 CNTNAP2Q9UHC6 1331 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 LAMB4A4D0S4 1761 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 PI4K2BG5E9Z4 385 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 GRIK3Q13003 919 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 DNAJC21Q5F1R6 531 aaKnown RBP9.75□□□□□ -0.85
PTPRE-202ENST00000306042 FAF2Q96CS3 445 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 RMDN1Q96DB5 314 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 SCYL1Q96KG9 808 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 SEMA6BQ9H3T3 888 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 CATSPERBQ9H7T0 1116 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 SPG21Q9NZD8 308 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 BARX2Q9UMQ3 279 aaPredicted RBP9.75□□□□□ -0.85
PTPRE-202ENST00000306042 COL18A1P39060 1754 aa9.75□□□□□ -0.85
PTPRE-202ENST00000306042 FBXO21O94952 628 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 CKBP12277 381 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 PTPN11Q06124 597 aaPredicted RBP9.74□□□□□ -0.85
PTPRE-202ENST00000306042 EFEMP1Q12805 493 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 PIGHQ14442 188 aaPredicted RBP9.74□□□□□ -0.85
PTPRE-202ENST00000306042 PSMD6Q15008 389 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 HHATQ5VTY9 493 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 ANKS3Q6ZW76 656 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 PABPC5Q96DU9 382 aaKnown RBP9.74□□□□□ -0.85
PTPRE-202ENST00000306042 IRAK4Q9NWZ3 460 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.74□□□□□ -0.85
PTPRE-202ENST00000306042 NUP98P52948 1817 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 EEF2KO00418 725 aaKnown RBP9.74□□□□□ -0.85
PTPRE-202ENST00000306042 GPD1P21695 349 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 CYP2C18P33260 490 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 SLC1A1P43005 524 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 MXRA7P84157 204 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 SPOPLQ6IQ16 392 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 GJB7Q6PEY0 223 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 TSHZ1Q6ZSZ6 1077 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 CDKL3Q8IVW4 592 aaPredicted RBP9.74□□□□□ -0.85
PTPRE-202ENST00000306042 PDIK1LQ8N165 341 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 RPRD1AQ96P16 312 aaPredicted RBP9.74□□□□□ -0.85
PTPRE-202ENST00000306042 ACO2Q99798 780 aaKnown RBP9.74□□□□□ -0.85
PTPRE-202ENST00000306042 ELOVL4Q9GZR5 314 aa9.74□□□□□ -0.85
PTPRE-202ENST00000306042 ANKRD63C9JTQ0 380 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms