RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 C6orf163Q5TEZ5 329 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 CTAGE3PQ8IX95 158 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 ATP6V0D2Q8N8Y2 350 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 OSBPL9Q96SU4 736 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 CDT1Q9H211 546 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 DPH5Q9H2P9 285 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 KIF9Q9HAQ2 790 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 OLA1Q9NTK5 396 aaKnown RBP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 OGFRQ9NZT2 677 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 PCDHB5Q9Y5E4 795 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 LACTBL1A8MY62 500 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 PSTPIP1O43586 416 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 RECQL4O94761 1208 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 SMPD1P17405 629 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 TPI1P60174 286 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 MYL6P60660 151 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 DEUP1Q05D60 604 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 BTG3Q14201 252 aaPredicted RBP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 CFAP157Q5JU67 520 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 HEATR6Q6AI08 1181 aaKnown RBP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 OVOS1Q6IE37 1185 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 SLC35G2Q8TBE7 412 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 CCT6BQ92526 530 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 KRT35Q92764 455 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 ZNF512Q96ME7 567 aaPredicted RBP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 PURBQ96QR8 312 aaKnown RBP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 ARHGAP28Q9P2N2 729 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 TBKBP1A7MCY6 615 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 AP1G2O75843 785 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 INHAP05111 366 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 GTF2F1P35269 517 aaKnown RBP eCLIP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 ARL1P40616 181 aaPredicted RBP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 TUFMP49411 452 aaKnown RBP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 CDH6P55285 790 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 CCZ1BP86790 482 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 CCZ1P86791 482 aaPredicted RBP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 HHATQ5VTY9 493 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 BSPRYQ5W0U4 402 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 TSHZ1Q6ZSZ6 1077 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 DNAAF3Q8N9W5 541 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 SEPT5Q99719 369 aaPredicted RBP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 SYT15Q9BQS2 421 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 DHX35Q9H5Z1 703 aaKnown RBP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 UXTQ9UBK9 157 aaPredicted RBP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 NAGPAQ9UK23 515 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 MYH13Q9UKX3 1938 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 SMIM23A6NLE4 172 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 CAPN15O75808 1086 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 RTN3O95197 1032 aaPredicted RBP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 CTCFP49711 727 aaPredicted RBP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 EPHB3P54753 998 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 EPHB1P54762 984 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 ARL4CP56559 192 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 DYNLT1P63172 113 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 UGCGQ16739 394 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 DEFB118Q96PH6 123 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 NTPCRQ9BSD7 190 aaKnown RBP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 KLHL8Q9P2G9 620 aaPredicted RBP8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 ADAMTS5Q9UNA0 930 aa8.75□□□□□ -1.01
SNRPD1-201ENST00000300413 ASTN1O14525 1302 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 LY75O60449 1722 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 LRRIQ3A6PVS8 624 aaPredicted RBP8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 KPNA7A9QM74 516 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 FOXN3O00409 490 aaPredicted RBP8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 CYP3A5P20815 502 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 BASP1P80723 227 aaKnown RBP8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 ROR1Q01973 937 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 GHRHRQ02643 423 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 PRKCZQ05513 592 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 ACAP1Q15027 740 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 GLRA4Q5JXX5 417 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 CYP4A22Q5TCH4 519 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 MAMDC4Q6UXC1 1216 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 CDR2LQ86X02 465 aaPredicted RBP8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 MRPS31Q92665 395 aaKnown RBP8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 CYFIP2Q96F07 1278 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 RNPEPQ9H4A4 650 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 RWDD3Q9Y3V2 267 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 I3L4J1 428 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 ASGR1P07306 291 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 INHBAP08476 426 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 HARS2P49590 506 aaKnown RBP8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 VPS41P49754 854 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 YWHAGP61981 247 aaKnown RBP eCLIP8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 MCL1Q07820 350 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 LRRC55Q6ZSA7 311 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 ADAT2Q7Z6V5 191 aaKnown RBP8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 TRIM42Q8IWZ5 723 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 RYBPQ8N488 228 aaPredicted RBP8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 MFSD14AQ96MC6 490 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 ZNF558Q96NG5 402 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 PI4K2AQ9BTU6 479 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 FRMD8Q9BZ67 464 aaPredicted RBP8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 PPP1R12CQ9BZL4 782 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 SP110Q9HB58 689 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 SNX12Q9UMY4 172 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 MAD1L1Q9Y6D9 718 aa8.74□□□□□ -1.01
SNRPD1-201ENST00000300413 B4GALT4O60513 344 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms