RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR35, Length 204 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR35snR35 BUD25P85052 153 aa1.88□□□□□ -2.11
snR35snR35 HPT1Q04178 221 aaKnown RBP1.88□□□□□ -2.11
snR35snR35 SML1Q04964 104 aa1.88□□□□□ -2.11
snR35snR35 YHR086W-AQ3E746 53 aa1.88□□□□□ -2.11
snR35snR35 YPR014CQ6B0W2 109 aa1.88□□□□□ -2.11
snR35snR35 YAR023CD6VPM8 179 aa1.87□□□□□ -2.11
snR35snR35 AHC2P25649 128 aa1.87□□□□□ -2.11
snR35snR35 ARO7P32178 256 aa1.87□□□□□ -2.11
snR35snR35 TFC1P32367 649 aa1.87□□□□□ -2.11
snR35snR35 YKR041WP36134 250 aa1.87□□□□□ -2.11
snR35snR35 SRP14P38985 146 aa1.87□□□□□ -2.11
snR35snR35 GAA1P39012 614 aa1.87□□□□□ -2.11
snR35snR35 LSM4P40070 187 aaKnown RBP1.87□□□□□ -2.11
snR35snR35 SAY1P53324 424 aa1.87□□□□□ -2.11
snR35snR35 AIM34Q03673 198 aa1.87□□□□□ -2.11
snR35snR35 GRE1Q08969 168 aa1.87□□□□□ -2.11
snR35snR35 MPD1Q12404 318 aaKnown RBP1.87□□□□□ -2.11
snR35snR35 MET5P47169 1442 aa1.86□□□□□ -2.11
snR35snR35 POR1P04840 283 aaKnown RBP1.86□□□□□ -2.11
snR35snR35 SEC14P24280 304 aaKnown RBP1.86□□□□□ -2.11
snR35snR35 RAD51P25454 400 aa1.86□□□□□ -2.11
snR35snR35 NVJ1P38881 321 aa1.86□□□□□ -2.11
snR35snR35 MTW1P39731 289 aa1.86□□□□□ -2.11
snR35snR35 YNL140CP53910 189 aa1.86□□□□□ -2.11
snR35snR35 SHH4Q06236 168 aa1.86□□□□□ -2.11
snR35snR35 ANT1Q06497 328 aa1.86□□□□□ -2.11
snR35snR35 YLR050CQ12155 161 aaKnown RBP1.86□□□□□ -2.11
snR35snR35 YLR412C-AQ3E742 68 aa1.86□□□□□ -2.11
snR35snR35 YLR236CA0A023PZG4 107 aa1.85□□□□□ -2.11
snR35snR35 RPS24AP0CX31 135 aaKnown RBP1.85□□□□□ -2.11
snR35snR35 RPS24BP0CX32 135 aaKnown RBP1.85□□□□□ -2.11
snR35snR35 ECM4P36156 370 aa1.85□□□□□ -2.11
snR35snR35 NSG1P38837 291 aa1.85□□□□□ -2.11
snR35snR35 MPC3P53311 146 aa1.85□□□□□ -2.11
snR35snR35 POP3P53833 195 aaPredicted RBP1.85□□□□□ -2.11
snR35snR35 GPI17Q04080 534 aa1.85□□□□□ -2.11
snR35snR35 CUE4Q04201 117 aaPredicted RBP1.85□□□□□ -2.11
snR35snR35 NAT3Q06504 195 aa1.85□□□□□ -2.11
snR35snR35 YOL014WQ08110 124 aa1.85□□□□□ -2.11
snR35snR35 QCR6P00127 147 aa1.84□□□□□ -2.11
snR35snR35 SPO13P23624 291 aa1.84□□□□□ -2.11
snR35snR35 TMA19P35691 167 aaKnown RBP1.84□□□□□ -2.11
snR35snR35 TVP38P36164 337 aa1.84□□□□□ -2.11
snR35snR35 YFR054CP43622 192 aa1.84□□□□□ -2.11
snR35snR35 PLP1Q04004 230 aa1.84□□□□□ -2.11
snR35snR35 BRX1Q08235 291 aaKnown RBP1.84□□□□□ -2.11
snR35snR35 YOR342CQ12182 319 aa1.84□□□□□ -2.11
snR35snR35 YML100W-AQ8TGT0 57 aa1.84□□□□□ -2.11
snR35snR35 YKL102CP34249 101 aa1.83□□□□□ -2.12
snR35snR35 FES1P38260 290 aa1.83□□□□□ -2.12
snR35snR35 YER076CP40049 302 aa1.83□□□□□ -2.12
snR35snR35 YFL019CP43576 117 aa1.83□□□□□ -2.12
snR35snR35 ERJ5P43613 295 aaPredicted RBP1.83□□□□□ -2.12
snR35snR35 KNH1P50112 268 aa1.83□□□□□ -2.12
snR35snR35 YMR295CQ03559 197 aa1.83□□□□□ -2.12
snR35snR35 SEC11P15367 167 aa1.82□□□□□ -2.12
snR35snR35 PHO85P17157 305 aa1.82□□□□□ -2.12
snR35snR35 YER135CP40082 130 aa1.82□□□□□ -2.12
snR35snR35 YMR099CQ03161 297 aaKnown RBP1.82□□□□□ -2.12
snR35snR35 VPS71Q03433 280 aa1.82□□□□□ -2.12
snR35snR35 SHH3Q04487 196 aa1.82□□□□□ -2.12
snR35snR35 PEX11Q12462 236 aa1.82□□□□□ -2.12
snR35snR35 CMD1P06787 147 aaKnown RBP1.81□□□□□ -2.12
snR35snR35 CUP9P41817 306 aa1.81□□□□□ -2.12
snR35snR35 GPI14P47088 403 aaKnown RBP1.81□□□□□ -2.12
snR35snR35 RAD28Q12021 506 aa1.81□□□□□ -2.12
snR35snR35 DGK1Q12382 290 aa1.81□□□□□ -2.12
snR35snR35 TIR1P10863 254 aa1.8□□□□□ -2.12
snR35snR35 VMA22P38784 181 aa1.8□□□□□ -2.12
snR35snR35 RFC2P40348 353 aa1.8□□□□□ -2.12
snR35snR35 XPT1P47165 209 aa1.8□□□□□ -2.12
snR35snR35 YDL180WQ12301 547 aa1.8□□□□□ -2.12
snR35snR35 ARC19P33204 171 aaKnown RBP1.79□□□□□ -2.12
snR35snR35 YBR219CP38317 127 aa1.79□□□□□ -2.12
snR35snR35 TVP23P38962 199 aa1.79□□□□□ -2.12
snR35snR35 SPC25P40014 221 aa1.79□□□□□ -2.12
snR35snR35 YER121WP40076 114 aa1.79□□□□□ -2.12
snR35snR35 NSA2P40078 261 aaKnown RBP1.79□□□□□ -2.12
snR35snR35 BAT2P47176 376 aaKnown RBP1.79□□□□□ -2.12
snR35snR35 MPA43P53583 542 aaPredicted RBP1.79□□□□□ -2.12
snR35snR35 YLR162WQ06235 118 aa1.79□□□□□ -2.12
snR35snR35 IRC23Q08416 157 aa1.79□□□□□ -2.12
snR35snR35 YLR053CQ12026 108 aa1.79□□□□□ -2.12
snR35snR35 FLO9P39712 1322 aa1.79□□□□□ -2.12
snR35snR35 QCR2P07257 368 aa1.78□□□□□ -2.12
snR35snR35 IDP1P21954 428 aaKnown RBP1.78□□□□□ -2.12
snR35snR35 RPL13BP40212 199 aaKnown RBP1.78□□□□□ -2.12
snR35snR35 TTI2P47168 421 aa1.78□□□□□ -2.12
snR35snR35 YMR253CQ04835 414 aa1.78□□□□□ -2.12
snR35snR35 YPR174CQ06616 221 aaPredicted RBP1.78□□□□□ -2.12
snR35snR35 RPL13AQ12690 199 aaPredicted RBP1.78□□□□□ -2.12
snR35snR35 NSP1P14907 823 aaKnown RBP1.77□□□□□ -2.13
snR35snR35 YGL010WP25338 174 aa1.77□□□□□ -2.13
snR35snR35 NUF2P33895 451 aa1.77□□□□□ -2.13
snR35snR35 PAM17P36147 197 aa1.77□□□□□ -2.13
snR35snR35 YNL033WP53964 284 aa1.77□□□□□ -2.13
snR35snR35 DAD4P69851 72 aa1.77□□□□□ -2.13
snR35snR35 SMD2Q06217 110 aaKnown RBP1.77□□□□□ -2.13
snR35snR35 YPR127WQ06494 345 aa1.77□□□□□ -2.13
snR35snR35 UPS2P35200 230 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms