RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W LAG1P38703 411 aa8□□□□□ -1.13
MSF1YPR047W COS8P38723 381 aa8□□□□□ -1.13
MSF1YPR047W MRPL49P40858 161 aaPredicted RBP8□□□□□ -1.13
MSF1YPR047W YMR181CQ03231 154 aa8□□□□□ -1.13
MSF1YPR047W THI74Q04083 370 aa8□□□□□ -1.13
MSF1YPR047W HTZ1Q12692 134 aaKnown RBP8□□□□□ -1.13
MSF1YPR047W COX2P00410 251 aa7.99□□□□□ -1.13
MSF1YPR047W SPS2P08459 502 aa7.99□□□□□ -1.13
MSF1YPR047W PAN3P36102 679 aaPredicted RBP7.99□□□□□ -1.13
MSF1YPR047W SDH4P37298 181 aa7.99□□□□□ -1.13
MSF1YPR047W LST8P41318 303 aa7.99□□□□□ -1.13
MSF1YPR047W ACT1P60010 375 aaKnown RBP7.99□□□□□ -1.13
MSF1YPR047W GRH1Q04410 372 aaKnown RBP7.99□□□□□ -1.13
MSF1YPR047W RTT103Q05543 409 aa7.99□□□□□ -1.13
MSF1YPR047W IRC23Q08416 157 aa7.99□□□□□ -1.13
MSF1YPR047W MRPL3P36516 390 aa7.98□□□□□ -1.13
MSF1YPR047W YPT31P38555 223 aaKnown RBP7.98□□□□□ -1.13
MSF1YPR047W YNL194CP40169 301 aa7.98□□□□□ -1.13
MSF1YPR047W ECM27P47144 725 aa7.98□□□□□ -1.13
MSF1YPR047W YGR219WP53307 113 aa7.98□□□□□ -1.13
MSF1YPR047W FSH2Q05015 223 aa7.98□□□□□ -1.13
MSF1YPR047W LSM12P38828 187 aaKnown RBP7.97□□□□□ -1.13
MSF1YPR047W IRC24P40580 263 aa7.97□□□□□ -1.13
MSF1YPR047W SNX4P47057 423 aa7.97□□□□□ -1.13
MSF1YPR047W GTF1P53260 183 aaPredicted RBP7.97□□□□□ -1.13
MSF1YPR047W LRS4Q04087 347 aaKnown RBP7.97□□□□□ -1.13
MSF1YPR047W MSC3Q05812 728 aa7.97□□□□□ -1.13
MSF1YPR047W ATG31Q12421 196 aa7.97□□□□□ -1.13
MSF1YPR047W YCR016WP25617 290 aaKnown RBP7.96□□□□□ -1.13
MSF1YPR047W YRA2P36036 203 aaKnown RBP RIP-Chip data7.96□□□□□ -1.13not detected
MSF1YPR047W GET2P40056 285 aa7.96□□□□□ -1.13
MSF1YPR047W ARP3P47117 449 aaKnown RBP7.96□□□□□ -1.13
MSF1YPR047W CPD1P53314 239 aa7.96□□□□□ -1.13
MSF1YPR047W SSU72P53538 206 aaPredicted RBP7.96□□□□□ -1.13
MSF1YPR047W TRP4P07285 380 aaPredicted RBP7.95□□□□□ -1.14
MSF1YPR047W AUA1P32450 94 aa7.95□□□□□ -1.14
MSF1YPR047W YGR210CP42942 411 aa7.95□□□□□ -1.14
MSF1YPR047W PAM18Q07914 168 aa7.95□□□□□ -1.14
MSF1YPR047W SOD1P00445 154 aaKnown RBP7.95□□□□□ -1.14
MSF1YPR047W NHP6BP11633 99 aaKnown RBP7.95□□□□□ -1.14
MSF1YPR047W YCP4P25349 247 aaKnown RBP7.95□□□□□ -1.14
MSF1YPR047W YBR184WP38299 523 aa7.95□□□□□ -1.14
MSF1YPR047W MIC12P38341 106 aa7.95□□□□□ -1.14
MSF1YPR047W SMX3P54999 86 aaPredicted RBP7.95□□□□□ -1.14
MSF1YPR047W TDA6Q06466 467 aa7.95□□□□□ -1.14
MSF1YPR047W ATG5Q12380 294 aa7.95□□□□□ -1.14
MSF1YPR047W PET494P07390 489 aaPredicted RBP7.94□□□□□ -1.14
MSF1YPR047W MPC2P38857 129 aa7.94□□□□□ -1.14
MSF1YPR047W VMA7P39111 118 aa7.94□□□□□ -1.14
MSF1YPR047W DFG10P40526 253 aa7.94□□□□□ -1.14
MSF1YPR047W RAD28Q12021 506 aa7.94□□□□□ -1.14
MSF1YPR047W YBR255C-AQ3E776 120 aa7.94□□□□□ -1.14
MSF1YPR047W YDR274CP87283 123 aa7.93□□□□□ -1.14
MSF1YPR047W FMP16Q12497 93 aa7.93□□□□□ -1.14
MSF1YPR047W YGL258W-AQ3E740 77 aa7.93□□□□□ -1.14
MSF1YPR047W QCR2P07257 368 aa7.92□□□□□ -1.14
MSF1YPR047W ECM33P38248 429 aaKnown RBP7.92□□□□□ -1.14
MSF1YPR047W BFR1P38934 470 aaKnown RBP RIP-Chip data7.92□□□□□ -1.14not detected
MSF1YPR047W YBR298C-AQ8TGK4 73 aa7.92□□□□□ -1.14
MSF1YPR047W PDC2P32896 925 aa7.91□□□□□ -1.14
MSF1YPR047W ERV15P38312 142 aa7.91□□□□□ -1.14
MSF1YPR047W IMD2P38697 523 aaKnown RBP7.91□□□□□ -1.14
MSF1YPR047W RRF1P38771 230 aa7.91□□□□□ -1.14
MSF1YPR047W YPI1P43587 155 aa7.91□□□□□ -1.14
MSF1YPR047W GPG1P53130 126 aa7.91□□□□□ -1.14
MSF1YPR047W CAX4P53223 239 aa7.91□□□□□ -1.14
MSF1YPR047W RDI1Q12434 202 aa7.91□□□□□ -1.14
MSF1YPR047W YAR068WP39564 161 aa7.9□□□□□ -1.14
MSF1YPR047W NCE103P53615 221 aa7.9□□□□□ -1.14
MSF1YPR047W SWT21P53873 357 aaPredicted RBP7.9□□□□□ -1.14
MSF1YPR047W SCW10Q04951 389 aa7.9□□□□□ -1.14
MSF1YPR047W GEP3Q08622 556 aa7.9□□□□□ -1.14
MSF1YPR047W PRM4Q12498 284 aa7.9□□□□□ -1.14
MSF1YPR047W ALK2P32789 676 aaPredicted RBP7.89□□□□□ -1.15
MSF1YPR047W QDR3P38227 689 aa7.89□□□□□ -1.15
MSF1YPR047W DOG2P38773 246 aa7.89□□□□□ -1.15
MSF1YPR047W DOG1P38774 246 aa7.89□□□□□ -1.15
MSF1YPR047W YER137CP40083 148 aaKnown RBP7.89□□□□□ -1.15
MSF1YPR047W BUL1P48524 976 aa7.89□□□□□ -1.15
MSF1YPR047W EST3Q03096 181 aa7.89□□□□□ -1.15
MSF1YPR047W YML108WQ03759 105 aa7.89□□□□□ -1.15
MSF1YPR047W YLR224WQ05947 369 aa7.89□□□□□ -1.15
MSF1YPR047W NIF3P53081 288 aa7.88□□□□□ -1.15
MSF1YPR047W ERV25P54837 211 aaKnown RBP7.88□□□□□ -1.15
MSF1YPR047W ARG80P07249 177 aa7.87□□□□□ -1.15
MSF1YPR047W MRP17P28778 131 aa7.87□□□□□ -1.15
MSF1YPR047W YGR050CP53231 118 aa7.87□□□□□ -1.15
MSF1YPR047W TIM11P81449 96 aaPredicted RBP7.87□□□□□ -1.15
MSF1YPR047W DYN2Q02647 92 aa7.87□□□□□ -1.15
MSF1YPR047W ISU1Q03020 165 aa7.87□□□□□ -1.15
MSF1YPR047W TRI1Q05024 226 aa7.87□□□□□ -1.15
MSF1YPR047W FEX2Q08991 375 aa7.87□□□□□ -1.15
MSF1YPR047W YCT1Q12235 531 aa7.87□□□□□ -1.15
MSF1YPR047W TAR1Q8TGM6 124 aa7.87□□□□□ -1.15
MSF1YPR047W URA5P13298 226 aaKnown RBP7.86□□□□□ -1.15
MSF1YPR047W CKS1P20486 150 aaKnown RBP7.86□□□□□ -1.15
MSF1YPR047W ACB1P31787 87 aa7.86□□□□□ -1.15
MSF1YPR047W CDS1P38221 457 aa7.86□□□□□ -1.15
MSF1YPR047W PET100P38958 111 aa7.86□□□□□ -1.15
MSF1YPR047W HAM1P47119 197 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms